RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
RPL28-211ENST00000560881 SCXQ7RTU7 201 aa10.68□□□□□ -0.7
RPL28-211ENST00000560881 KIAA0087Q14695 138 aa10.67□□□□□ -0.7
RPL28-211ENST00000560881 CDIP1Q9H305 208 aa10.67□□□□□ -0.7
RPL28-211ENST00000560881 SMR3BP02814 79 aaPredicted RBP10.66□□□□□ -0.7
RPL28-211ENST00000560881 C10orf25Q5T742 122 aa10.66□□□□□ -0.7
RPL28-211ENST00000560881 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
RPL28-211ENST00000560881 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
RPL28-211ENST00000560881 LINC01561Q8N1V8 128 aa10.66□□□□□ -0.7
RPL28-211ENST00000560881 C2orf48Q96LS8 159 aa10.66□□□□□ -0.7
RPL28-211ENST00000560881 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
RPL28-211ENST00000560881 SMIM1B2RUZ4 78 aa10.65□□□□□ -0.7
RPL28-211ENST00000560881 C2orf82Q6UX34 121 aa10.65□□□□□ -0.7
RPL28-211ENST00000560881 UNQ6190/PRO20217Q6UXQ8 127 aa10.65□□□□□ -0.7
RPL28-211ENST00000560881 TRBV20-1A0A075B6N2 111 aa10.64□□□□□ -0.71
RPL28-211ENST00000560881 IGKV2-24A0A0C4DH68 120 aa10.64□□□□□ -0.71
RPL28-211ENST00000560881 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
RPL28-211ENST00000560881 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
RPL28-211ENST00000560881 CIRBP-AS1Q8TBR5 109 aa10.64□□□□□ -0.71
RPL28-211ENST00000560881 A0A096LNI7 61 aa10.63□□□□□ -0.71
RPL28-211ENST00000560881 C11orf86A6NJI1 115 aa10.63□□□□□ -0.71
RPL28-211ENST00000560881 ZNF815PA8K554 130 aa10.63□□□□□ -0.71
RPL28-211ENST00000560881 M0QXV9 152 aa10.63□□□□□ -0.71
RPL28-211ENST00000560881 NDUFA1O15239 70 aa10.63□□□□□ -0.71
RPL28-211ENST00000560881 TSPAN13O95857 204 aa10.63□□□□□ -0.71
RPL28-211ENST00000560881 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
RPL28-211ENST00000560881 TEN1Q86WV5 123 aa10.63□□□□□ -0.71
RPL28-211ENST00000560881 KRTAP4-5Q9BYR2 181 aa10.63□□□□□ -0.71
RPL28-211ENST00000560881 HERVK_113P61574 105 aa10.62□□□□□ -0.71
RPL28-211ENST00000560881 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
RPL28-211ENST00000560881 C6orf48Q9UBA6 75 aa10.62□□□□□ -0.71
RPL28-211ENST00000560881 PRSS2P07478 247 aa10.61□□□□□ -0.71
RPL28-211ENST00000560881 PSMB2P49721 201 aa10.61□□□□□ -0.71
RPL28-211ENST00000560881 CIRBPQ14011 172 aaKnown RBP10.6□□□□□ -0.71
RPL28-211ENST00000560881 Q8IZM0 81 aa10.6□□□□□ -0.71
RPL28-211ENST00000560881 Q8N1X5 172 aa10.6□□□□□ -0.71
RPL28-211ENST00000560881 SRSF9Q13242 221 aaKnown RBP eCLIP10.6□□□□□ -0.71
RPL28-211ENST00000560881 SCGB1D4Q6XE38 83 aa10.6□□□□□ -0.71
RPL28-211ENST00000560881 RPL18AQ02543 176 aaKnown RBP10.59□□□□□ -0.71
RPL28-211ENST00000560881 GAGE2BQ13066 116 aa10.59□□□□□ -0.71
RPL28-211ENST00000560881 C9orf116Q5BN46 136 aaPredicted RBP10.59□□□□□ -0.71
RPL28-211ENST00000560881 C6orf226Q5I0X4 101 aa10.59□□□□□ -0.71
RPL28-211ENST00000560881 TMEM170BQ5T4T1 132 aa10.59□□□□□ -0.71
RPL28-211ENST00000560881 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
RPL28-211ENST00000560881 A0A087WYN8 130 aa10.58□□□□□ -0.72
RPL28-211ENST00000560881 LOC107984156A0A0G2JMH3 177 aa10.58□□□□□ -0.72
RPL28-211ENST00000560881 LOC107984640A0A0U1RRK4 108 aa10.58□□□□□ -0.72
RPL28-211ENST00000560881 MT-ATP8P03928 68 aa10.58□□□□□ -0.72
RPL28-211ENST00000560881 ARL17AQ8IVW1 177 aa10.58□□□□□ -0.72
RPL28-211ENST00000560881 DPH3Q96FX2 82 aa10.58□□□□□ -0.72
RPL28-211ENST00000560881 F8WDY8 70 aa10.57□□□□□ -0.72
RPL28-211ENST00000560881 COX7B2Q8TF08 81 aa10.57□□□□□ -0.72
RPL28-211ENST00000560881 PLEKHB2Q96CS7 222 aa10.57□□□□□ -0.72
RPL28-211ENST00000560881 ABCA13Q86UQ4 5058 aa10.57□□□□□ -0.72
RPL28-211ENST00000560881 VPS13BQ7Z7G8 4022 aa10.56□□□□□ -0.72
RPL28-211ENST00000560881 Q5VSD8 79 aa10.56□□□□□ -0.72
RPL28-211ENST00000560881 IGLV5-39A0A0G2JS06 123 aa10.55□□□□□ -0.72
RPL28-211ENST00000560881 Q6ZRP5 223 aa10.55□□□□□ -0.72
RPL28-211ENST00000560881 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
RPL28-211ENST00000560881 TRBV30A0A0K0K1B3 111 aa10.54□□□□□ -0.72
RPL28-211ENST00000560881 TCL1BO95988 128 aa10.54□□□□□ -0.72
RPL28-211ENST00000560881 EPM2AB3EWF7 344 aa10.53□□□□□ -0.72
RPL28-211ENST00000560881 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
RPL28-211ENST00000560881 PCLOQ9Y6V0 5065 aa10.53□□□□□ -0.72
RPL28-211ENST00000560881 GAGE2EQ4V326 116 aa10.53□□□□□ -0.72
RPL28-211ENST00000560881 PLAC8Q9NZF1 115 aa10.53□□□□□ -0.72
RPL28-211ENST00000560881 GAGE2DQ9UEU5 116 aa10.53□□□□□ -0.72
RPL28-211ENST00000560881 PRO1854Q9UHT4 67 aa10.53□□□□□ -0.72
RPL28-211ENST00000560881 PKIGQ9Y2B9 76 aa10.53□□□□□ -0.72
RPL28-211ENST00000560881 TMEM223A0PJW6 202 aa10.52□□□□□ -0.73
RPL28-211ENST00000560881 CFC1BP0CG36 223 aa10.52□□□□□ -0.73
RPL28-211ENST00000560881 CFC1P0CG37 223 aa10.52□□□□□ -0.73
RPL28-211ENST00000560881 TLX1NBP0CAT3 122 aa10.51□□□□□ -0.73
RPL28-211ENST00000560881 CXCL5P42830 114 aa10.51□□□□□ -0.73
RPL28-211ENST00000560881 ANKRD29Q8N6D5 301 aa10.51□□□□□ -0.73
RPL28-211ENST00000560881 LINC00474Q9P2X8 69 aa10.51□□□□□ -0.73
RPL28-211ENST00000560881 ANAPC13Q9BS18 74 aa10.5□□□□□ -0.73
RPL28-211ENST00000560881 A0A1W2PNN7 141 aa10.5□□□□□ -0.73
RPL28-211ENST00000560881 NDUFC2-KCTD14E9PQ53 114 aa10.5□□□□□ -0.73
RPL28-211ENST00000560881 FAM229AH3BQW9 127 aa10.5□□□□□ -0.73
RPL28-211ENST00000560881 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
RPL28-211ENST00000560881 A0A0B4J2C4 111 aa10.49□□□□□ -0.73
RPL28-211ENST00000560881 FAM168BA1KXE4 195 aa10.49□□□□□ -0.73
RPL28-211ENST00000560881 SLC25A20O43772 301 aa10.47□□□□□ -0.73
RPL28-211ENST00000560881 Q6Q795 121 aa10.47□□□□□ -0.73
RPL28-211ENST00000560881 J3QQQ9 107 aa10.47□□□□□ -0.73
RPL28-211ENST00000560881 LEPROTO15243 131 aa10.47□□□□□ -0.73
RPL28-211ENST00000560881 LGALS3P17931 250 aaKnown RBP10.47□□□□□ -0.73
RPL28-211ENST00000560881 C9orf129Q5T035 196 aaKnown RBP10.47□□□□□ -0.73
RPL28-211ENST00000560881 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
RPL28-211ENST00000560881 TSPEAR-AS2P59090 65 aa10.46□□□□□ -0.74
RPL28-211ENST00000560881 SFTA2Q6UW10 78 aa10.46□□□□□ -0.74
RPL28-211ENST00000560881 SRRM2Q9UQ35 2752 aaKnown RBP10.45□□□□□ -0.74
RPL28-211ENST00000560881 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
RPL28-211ENST00000560881 RPL13AP40429 203 aaKnown RBP10.44□□□□□ -0.74
RPL28-211ENST00000560881 KRTAP10-4P60372 401 aaPredicted RBP10.44□□□□□ -0.74
RPL28-211ENST00000560881 ATXN8Q156A1 80 aa10.44□□□□□ -0.74
RPL28-211ENST00000560881 FAM19A5Q7Z5A7 132 aaPredicted RBP10.44□□□□□ -0.74
RPL28-211ENST00000560881 KRTAP7-1Q8IUC3 87 aa10.44□□□□□ -0.74
RPL28-211ENST00000560881 PFN2P35080 140 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms