RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 CHTF8P0CG12 524 aa8.69□□□□□ -1.02
HMBOX1-213ENST00000560269 IFITM1P13164 125 aa8.69□□□□□ -1.02
HMBOX1-213ENST00000560269 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMBOX1-213ENST00000560269 SOSTDC1Q6X4U4 206 aa8.69□□□□□ -1.02
HMBOX1-213ENST00000560269 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
HMBOX1-213ENST00000560269 LRP1BQ9NZR2 4599 aa8.69□□□□□ -1.02
HMBOX1-213ENST00000560269 PANO1I0J062 215 aa8.68□□□□□ -1.02
HMBOX1-213ENST00000560269 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
HMBOX1-213ENST00000560269 HNRNPA3P51991 378 aaKnown RBP8.68□□□□□ -1.02
HMBOX1-213ENST00000560269 TAL2Q16559 108 aa8.68□□□□□ -1.02
HMBOX1-213ENST00000560269 Q6ZSA8 131 aa8.68□□□□□ -1.02
HMBOX1-213ENST00000560269 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
HMBOX1-213ENST00000560269 PLA2G2DQ9UNK4 145 aa8.68□□□□□ -1.02
HMBOX1-213ENST00000560269 NPC2P61916 151 aa8.67□□□□□ -1.02
HMBOX1-213ENST00000560269 MUSTN1Q8IVN3 82 aa8.67□□□□□ -1.02
HMBOX1-213ENST00000560269 COPS9Q8WXC6 57 aa8.67□□□□□ -1.02
HMBOX1-213ENST00000560269 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
HMBOX1-213ENST00000560269 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
HMBOX1-213ENST00000560269 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
HMBOX1-213ENST00000560269 HSD52Q0P140 79 aa8.65□□□□□ -1.02
HMBOX1-213ENST00000560269 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.02
HMBOX1-213ENST00000560269 Q8NDZ9 215 aa8.65□□□□□ -1.02
HMBOX1-213ENST00000560269 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
HMBOX1-213ENST00000560269 NDUFC2O95298 119 aa8.64□□□□□ -1.03
HMBOX1-213ENST00000560269 VPREB1P12018 145 aa8.64□□□□□ -1.03
HMBOX1-213ENST00000560269 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
HMBOX1-213ENST00000560269 A0A1W2PNN7 141 aa8.63□□□□□ -1.03
HMBOX1-213ENST00000560269 DDTP30046 118 aa8.63□□□□□ -1.03
HMBOX1-213ENST00000560269 RPL24P83731 157 aaKnown RBP8.63□□□□□ -1.03
HMBOX1-213ENST00000560269 SERTAD4-AS1Q5TG53 156 aa8.63□□□□□ -1.03
HMBOX1-213ENST00000560269 CEND1Q8N111 149 aa8.63□□□□□ -1.03
HMBOX1-213ENST00000560269 DPH3Q96FX2 82 aa8.63□□□□□ -1.03
HMBOX1-213ENST00000560269 PLAC8Q9NZF1 115 aa8.63□□□□□ -1.03
HMBOX1-213ENST00000560269 A0A087WYN8 130 aa8.62□□□□□ -1.03
HMBOX1-213ENST00000560269 EPPK1P58107 5090 aaKnown RBP8.61□□□□□ -1.03
HMBOX1-213ENST00000560269 APOBP04114 4563 aaKnown RBP8.61□□□□□ -1.03
HMBOX1-213ENST00000560269 CTAG1AP78358 180 aa8.61□□□□□ -1.03
HMBOX1-213ENST00000560269 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
HMBOX1-213ENST00000560269 A4D1N5 150 aa8.6□□□□□ -1.03
HMBOX1-213ENST00000560269 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
HMBOX1-213ENST00000560269 TRBV10-2A0A0K0K1G8 114 aa8.59□□□□□ -1.03
HMBOX1-213ENST00000560269 PRR3P79522 188 aaKnown RBP8.59□□□□□ -1.03
HMBOX1-213ENST00000560269 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
HMBOX1-213ENST00000560269 C22orf24Q9Y442 160 aa8.59□□□□□ -1.03
HMBOX1-213ENST00000560269 IGKV2-28A0A075B6P5 120 aa8.58□□□□□ -1.04
HMBOX1-213ENST00000560269 M0QXV9 152 aa8.58□□□□□ -1.04
HMBOX1-213ENST00000560269 M0R378 163 aa8.58□□□□□ -1.04
HMBOX1-213ENST00000560269 NCR3O14931 201 aa8.58□□□□□ -1.04
HMBOX1-213ENST00000560269 IGKV2D-28P01615 120 aa8.58□□□□□ -1.04
HMBOX1-213ENST00000560269 FXYD2P54710 66 aa8.58□□□□□ -1.04
HMBOX1-213ENST00000560269 SCXQ7RTU7 201 aa8.58□□□□□ -1.04
HMBOX1-213ENST00000560269 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
HMBOX1-213ENST00000560269 A6NJY4 79 aa8.57□□□□□ -1.04
HMBOX1-213ENST00000560269 M0R143 59 aa8.56□□□□□ -1.04
HMBOX1-213ENST00000560269 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
HMBOX1-213ENST00000560269 BVES-AS1Q5T3Y7 98 aa8.56□□□□□ -1.04
HMBOX1-213ENST00000560269 MRPL55Q7Z7F7 128 aaKnown RBP8.56□□□□□ -1.04
HMBOX1-213ENST00000560269 C7orf33Q8WU49 177 aa8.56□□□□□ -1.04
HMBOX1-213ENST00000560269 HINT1P49773 126 aaPredicted RBP8.55□□□□□ -1.04
HMBOX1-213ENST00000560269 XGP55808 180 aa8.55□□□□□ -1.04
HMBOX1-213ENST00000560269 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-213ENST00000560269 LINC00337Q8N6G1 96 aa8.55□□□□□ -1.04
HMBOX1-213ENST00000560269 LINC00167Q96N53 147 aa8.55□□□□□ -1.04
HMBOX1-213ENST00000560269 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
HMBOX1-213ENST00000560269 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
HMBOX1-213ENST00000560269 CFC1P0CG37 223 aa8.54□□□□□ -1.04
HMBOX1-213ENST00000560269 HAMPP81172 84 aa8.54□□□□□ -1.04
HMBOX1-213ENST00000560269 TRAV13-2A0A0B4J235 113 aa8.53□□□□□ -1.04
HMBOX1-213ENST00000560269 A0A1B0GWB2 263 aa8.53□□□□□ -1.04
HMBOX1-213ENST00000560269 IGLV6-57P01721 117 aa8.53□□□□□ -1.04
HMBOX1-213ENST00000560269 IGLV1-50A0A075B6I6 118 aa8.52□□□□□ -1.05
HMBOX1-213ENST00000560269 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
HMBOX1-213ENST00000560269 PCP4L1A6NKN8 68 aa8.52□□□□□ -1.05
HMBOX1-213ENST00000560269 CDK2AP2O75956 126 aa8.52□□□□□ -1.05
HMBOX1-213ENST00000560269 TMEM126AQ9H061 195 aa8.52□□□□□ -1.05
HMBOX1-213ENST00000560269 TRBV10-3A0A0K0K1G6 114 aa8.51□□□□□ -1.05
HMBOX1-213ENST00000560269 S100A7L2Q5SY68 101 aa8.51□□□□□ -1.05
HMBOX1-213ENST00000560269 OR13C6PQ8NH95 151 aa8.51□□□□□ -1.05
HMBOX1-213ENST00000560269 NHP2Q9NX24 153 aaKnown RBP8.51□□□□□ -1.05
HMBOX1-213ENST00000560269 A6NDN8 102 aa8.5□□□□□ -1.05
HMBOX1-213ENST00000560269 RPL37AP8A6NKH3 93 aa8.5□□□□□ -1.05
HMBOX1-213ENST00000560269 KRTAP11-1Q8IUC1 163 aa8.5□□□□□ -1.05
HMBOX1-213ENST00000560269 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
HMBOX1-213ENST00000560269 UBE2BP63146 152 aa8.49□□□□□ -1.05
HMBOX1-213ENST00000560269 KCNQ1DNQ9H478 68 aa8.49□□□□□ -1.05
HMBOX1-213ENST00000560269 PRO1854Q9UHT4 67 aa8.49□□□□□ -1.05
HMBOX1-213ENST00000560269 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-213ENST00000560269 CBY1Q9Y3M2 126 aa8.48□□□□□ -1.05
HMBOX1-213ENST00000560269 K7ERJ3 54 aa8.47□□□□□ -1.05
HMBOX1-213ENST00000560269 PRYO14603 147 aa8.47□□□□□ -1.05
HMBOX1-213ENST00000560269 RYR1P21817 5038 aa8.47□□□□□ -1.05
HMBOX1-213ENST00000560269 HSPG2P98160 4391 aa8.46□□□□□ -1.05
HMBOX1-213ENST00000560269 TRAV23DV6A0A075B6W5 121 aa8.46□□□□□ -1.06
HMBOX1-213ENST00000560269 BATFQ16520 125 aa8.46□□□□□ -1.06
HMBOX1-213ENST00000560269 SNHG12Q9BXW3 62 aa8.46□□□□□ -1.06
HMBOX1-213ENST00000560269 SPRR1AP35321 89 aa8.45□□□□□ -1.06
HMBOX1-213ENST00000560269 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
HMBOX1-213ENST00000560269 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
HMBOX1-213ENST00000560269 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
HMBOX1-213ENST00000560269 PSORS1C2Q9UIG4 136 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms