RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TAL2Q16559 108 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 HSD52Q0P140 79 aa11.56□□□□□ -0.56
CLPX-203ENST00000558958 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
CLPX-203ENST00000558958 PKHD1P08F94 4074 aa11.55□□□□□ -0.56
CLPX-203ENST00000558958 IGKV2-24A0A0C4DH68 120 aa11.55□□□□□ -0.56
CLPX-203ENST00000558958 CTAG1AP78358 180 aa11.55□□□□□ -0.56
CLPX-203ENST00000558958 COPS9Q8WXC6 57 aa11.55□□□□□ -0.56
CLPX-203ENST00000558958 PPDPFQ9H3Y8 114 aa11.55□□□□□ -0.56
CLPX-203ENST00000558958 CHTF8P0CG12 524 aa11.53□□□□□ -0.56
CLPX-203ENST00000558958 CEND1Q8N111 149 aa11.52□□□□□ -0.56
CLPX-203ENST00000558958 LINC00474Q9P2X8 69 aa11.52□□□□□ -0.56
CLPX-203ENST00000558958 DNAH8Q96JB1 4490 aa11.52□□□□□ -0.57
CLPX-203ENST00000558958 PANO1I0J062 215 aa11.51□□□□□ -0.57
CLPX-203ENST00000558958 KRTAP10-1P60331 282 aa11.51□□□□□ -0.57
CLPX-203ENST00000558958 Q8NDZ9 215 aa11.51□□□□□ -0.57
CLPX-203ENST00000558958 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
CLPX-203ENST00000558958 PCP4L1A6NKN8 68 aa11.5□□□□□ -0.57
CLPX-203ENST00000558958 RPL24P83731 157 aaKnown RBP11.5□□□□□ -0.57
CLPX-203ENST00000558958 SPACA4Q8TDM5 124 aa11.5□□□□□ -0.57
CLPX-203ENST00000558958 DYNC1H1Q14204 4646 aaKnown RBP11.49□□□□□ -0.57
CLPX-203ENST00000558958 PLA2G2DQ9UNK4 145 aa11.49□□□□□ -0.57
CLPX-203ENST00000558958 FAM168BA1KXE4 195 aa11.48□□□□□ -0.57
CLPX-203ENST00000558958 A4D1N5 150 aa11.48□□□□□ -0.57
CLPX-203ENST00000558958 NDUFC2O95298 119 aa11.48□□□□□ -0.57
CLPX-203ENST00000558958 FXYD2P54710 66 aa11.48□□□□□ -0.57
CLPX-203ENST00000558958 VPREB1P12018 145 aa11.47□□□□□ -0.57
CLPX-203ENST00000558958 SERTAD4-AS1Q5TG53 156 aa11.47□□□□□ -0.57
CLPX-203ENST00000558958 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
CLPX-203ENST00000558958 BVES-AS1Q5T3Y7 98 aa11.46□□□□□ -0.57
CLPX-203ENST00000558958 KRTAP7-1Q8IUC3 87 aa11.46□□□□□ -0.57
CLPX-203ENST00000558958 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
CLPX-203ENST00000558958 HINT1P49773 126 aaPredicted RBP11.45□□□□□ -0.58
CLPX-203ENST00000558958 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
CLPX-203ENST00000558958 Q6ZSA8 131 aa11.45□□□□□ -0.58
CLPX-203ENST00000558958 FAM30AQ9NZY2 134 aa11.45□□□□□ -0.58
CLPX-203ENST00000558958 TMEM238LA0A1B0GVL6 79 aa11.44□□□□□ -0.58
CLPX-203ENST00000558958 A6NJY4 79 aa11.44□□□□□ -0.58
CLPX-203ENST00000558958 M0R143 59 aa11.44□□□□□ -0.58
CLPX-203ENST00000558958 FAM19A5Q7Z5A7 132 aaPredicted RBP11.44□□□□□ -0.58
CLPX-203ENST00000558958 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
CLPX-203ENST00000558958 IGLV5-37A0A075B6J1 123 aa11.44□□□□□ -0.58
CLPX-203ENST00000558958 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
CLPX-203ENST00000558958 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
CLPX-203ENST00000558958 A0A087WYN8 130 aa11.42□□□□□ -0.58
CLPX-203ENST00000558958 EPM2AB3EWF7 344 aa11.42□□□□□ -0.58
CLPX-203ENST00000558958 NCR3O14931 201 aa11.42□□□□□ -0.58
CLPX-203ENST00000558958 TRBV10-2A0A0K0K1G8 114 aa11.41□□□□□ -0.58
CLPX-203ENST00000558958 CFC1BP0CG36 223 aa11.41□□□□□ -0.58
CLPX-203ENST00000558958 CFC1P0CG37 223 aa11.41□□□□□ -0.58
CLPX-203ENST00000558958 NKAPP1Q8N9T2 125 aa11.41□□□□□ -0.58
CLPX-203ENST00000558958 PLAC8Q9NZF1 115 aa11.41□□□□□ -0.58
CLPX-203ENST00000558958 C22orf24Q9Y442 160 aa11.41□□□□□ -0.58
CLPX-203ENST00000558958 M0R378 163 aa11.39□□□□□ -0.59
CLPX-203ENST00000558958 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
CLPX-203ENST00000558958 M0QXV9 152 aa11.38□□□□□ -0.59
CLPX-203ENST00000558958 NHP2Q9NX24 153 aaKnown RBP11.38□□□□□ -0.59
CLPX-203ENST00000558958 A0A0B4J2C4 111 aa11.38□□□□□ -0.59
CLPX-203ENST00000558958 A0A1B0GWB2 263 aa11.38□□□□□ -0.59
CLPX-203ENST00000558958 MRPL55Q7Z7F7 128 aaKnown RBP11.38□□□□□ -0.59
CLPX-203ENST00000558958 C7orf33Q8WU49 177 aa11.38□□□□□ -0.59
CLPX-203ENST00000558958 TRAV13-2A0A0B4J235 113 aa11.37□□□□□ -0.59
CLPX-203ENST00000558958 BATFQ16520 125 aa11.37□□□□□ -0.59
CLPX-203ENST00000558958 EPPK1P58107 5090 aaKnown RBP11.36□□□□□ -0.59
CLPX-203ENST00000558958 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
CLPX-203ENST00000558958 CIRBP-AS1Q8TBR5 109 aa11.36□□□□□ -0.59
CLPX-203ENST00000558958 RAB37Q96AX2 223 aa11.36□□□□□ -0.59
CLPX-203ENST00000558958 SNHG12Q9BXW3 62 aa11.36□□□□□ -0.59
CLPX-203ENST00000558958 A6NDN8 102 aa11.35□□□□□ -0.59
CLPX-203ENST00000558958 GAGE10A6NGK3 116 aa11.35□□□□□ -0.59
CLPX-203ENST00000558958 PHF5AQ7RTV0 110 aaKnown RBP11.35□□□□□ -0.59
CLPX-203ENST00000558958 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
CLPX-203ENST00000558958 K7ERJ3 54 aa11.34□□□□□ -0.59
CLPX-203ENST00000558958 IGLV6-57P01721 117 aa11.34□□□□□ -0.59
CLPX-203ENST00000558958 LBHQ53QV2 105 aaPredicted RBP11.34□□□□□ -0.59
CLPX-203ENST00000558958 S100A7L2Q5SY68 101 aa11.34□□□□□ -0.59
CLPX-203ENST00000558958 OR13C6PQ8NH95 151 aa11.34□□□□□ -0.59
CLPX-203ENST00000558958 TMEM126AQ9H061 195 aa11.33□□□□□ -0.6
CLPX-203ENST00000558958 PRO1854Q9UHT4 67 aa11.33□□□□□ -0.6
CLPX-203ENST00000558958 TRBV10-3A0A0K0K1G6 114 aa11.32□□□□□ -0.6
CLPX-203ENST00000558958 APOBP04114 4563 aaKnown RBP11.32□□□□□ -0.6
CLPX-203ENST00000558958 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
CLPX-203ENST00000558958 HAMPP81172 84 aa11.32□□□□□ -0.6
CLPX-203ENST00000558958 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
CLPX-203ENST00000558958 RPL37AP8A6NKH3 93 aa11.31□□□□□ -0.6
CLPX-203ENST00000558958 XGP55808 180 aa11.29□□□□□ -0.6
CLPX-203ENST00000558958 KCNQ1DNQ9H478 68 aa11.28□□□□□ -0.6
CLPX-203ENST00000558958 H7C2G1 150 aa11.27□□□□□ -0.6
CLPX-203ENST00000558958 UBE2BP63146 152 aa11.27□□□□□ -0.6
CLPX-203ENST00000558958 KRTAP11-1Q8IUC1 163 aa11.27□□□□□ -0.6
CLPX-203ENST00000558958 TRAV23DV6A0A075B6W5 121 aa11.25□□□□□ -0.61
CLPX-203ENST00000558958 SMIM11BQ8TCY0 68 aa11.25□□□□□ -0.61
CLPX-203ENST00000558958 CBY1Q9Y3M2 126 aa11.25□□□□□ -0.61
CLPX-203ENST00000558958 PRYO14603 147 aa11.24□□□□□ -0.61
CLPX-203ENST00000558958 TSPAN13O95857 204 aa11.24□□□□□ -0.61
CLPX-203ENST00000558958 COL5A1-AS1Q5SY13 56 aa11.24□□□□□ -0.61
CLPX-203ENST00000558958 RPL28P46779 137 aaKnown RBP11.23□□□□□ -0.61
CLPX-203ENST00000558958 Q1RN00 199 aa11.23□□□□□ -0.61
CLPX-203ENST00000558958 ZNF73O43830 326 aaPredicted RBP11.22□□□□□ -0.61
CLPX-203ENST00000558958 RYR1P21817 5038 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms