RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 C6orf48Q9UBA6 75 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 SS18L2Q9UHA2 77 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 PYGO1Q9Y3Y4 419 aa3.38□□□□□ -1.87
SMAD3-209ENST00000558894 IGLV4-3A0A075B6K6 122 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 A0A087WZ39 114 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 C9orf118A6NHY6 69 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 F8W1H4 67 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 SPAG11BQ08648 103 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 BVES-AS1Q5T3Y7 98 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 Q6Q795 121 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 UNQ6190/PRO20217Q6UXQ8 127 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 LINC00173Q6ZV60 143 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 PKIGQ9Y2B9 76 aa3.37□□□□□ -1.87
SMAD3-209ENST00000558894 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 M0QXV9 152 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 MT-ND6P03923 174 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 IGLV7-43P04211 117 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 KRTAP1-4P0C5Y4 121 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
SMAD3-209ENST00000558894 ZC2HC1BQ5TFG8 222 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 REG3GQ6UW15 175 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 TMEM136Q6ZRR5 245 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 ERASQ7Z444 233 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 ATP5L2Q7Z4Y8 100 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 FAM19A3Q7Z5A8 133 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 ORMDL3Q8N138 153 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 OR13C6PQ8NH95 151 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 PRELID3AQ96N28 172 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 AMELXQ99217 191 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 TRAPPC1Q9Y5R8 145 aa3.36□□□□□ -1.87
SMAD3-209ENST00000558894 A0A1B0GX51 115 aa3.35□□□□□ -1.87
SMAD3-209ENST00000558894 IGIPA6NJ69 53 aa3.35□□□□□ -1.87
SMAD3-209ENST00000558894 UBE2D1P51668 147 aa3.35□□□□□ -1.87
SMAD3-209ENST00000558894 RPS28P62857 69 aaKnown RBP3.35□□□□□ -1.87
SMAD3-209ENST00000558894 RPL18AQ02543 176 aaKnown RBP3.35□□□□□ -1.87
SMAD3-209ENST00000558894 C1orf137Q5JT78 98 aa3.35□□□□□ -1.87
SMAD3-209ENST00000558894 C2orf82Q6UX34 121 aa3.35□□□□□ -1.87
SMAD3-209ENST00000558894 Q8N8P6 123 aa3.35□□□□□ -1.87
SMAD3-209ENST00000558894 NDUFA1O15239 70 aa3.34□□□□□ -1.87
SMAD3-209ENST00000558894 IFI27P40305 119 aaPredicted RBP3.34□□□□□ -1.87
SMAD3-209ENST00000558894 SLC25A34Q6PIV7 304 aa3.34□□□□□ -1.87
SMAD3-209ENST00000558894 C2orf66Q6UXQ4 117 aa3.34□□□□□ -1.87
SMAD3-209ENST00000558894 LINC01561Q8N1V8 128 aa3.34□□□□□ -1.87
SMAD3-209ENST00000558894 C18orf32Q8TCD1 76 aa3.34□□□□□ -1.87
SMAD3-209ENST00000558894 TRBV30A0A0K0K1B3 111 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 LOC389332A0A1B0GUA5 103 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 H0Y9J4 135 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 TRIAP1O43715 76 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 SPINK8P0C7L1 97 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 FABP2P12104 132 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 GAGE2EQ4V326 116 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 FAM19A5Q7Z5A7 132 aaPredicted RBP3.33□□□□□ -1.88
SMAD3-209ENST00000558894 PRR26Q8N8Z3 221 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 TMEM141Q96I45 108 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 SPANXB1Q9NS25 103 aaPredicted RBP3.33□□□□□ -1.88
SMAD3-209ENST00000558894 GAGE2DQ9UEU5 116 aa3.33□□□□□ -1.88
SMAD3-209ENST00000558894 A0A1W2PPM0 123 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 LINC01546A6NGU7 62 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 NDUFC2-KCTD14E9PQ53 114 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 J3KT08 172 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 K7EMI3 77 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 SERF1AO75920 110 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 KRTDAPP60985 99 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 PMVKQ15126 192 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 BAGE3Q86Y29 109 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 MAP1LC3CQ9BXW4 147 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 GNB1LQ9BYB4 327 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 MAP1LC3AQ9H492 121 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 CDKN2A-AS1Q9UH64 79 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 SPCS1Q9Y6A9 102 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
SMAD3-209ENST00000558894 C3orf79P0CE67 100 aa3.31□□□□□ -1.88
SMAD3-209ENST00000558894 LINC00310P59036 64 aa3.31□□□□□ -1.88
SMAD3-209ENST00000558894 ORMDL2Q53FV1 153 aa3.31□□□□□ -1.88
SMAD3-209ENST00000558894 Q8IZM0 81 aa3.31□□□□□ -1.88
SMAD3-209ENST00000558894 DIRC1Q969H9 104 aa3.31□□□□□ -1.88
SMAD3-209ENST00000558894 IGLV5-45A0A087WSX0 123 aa3.3□□□□□ -1.88
SMAD3-209ENST00000558894 H3BMG7 143 aa3.3□□□□□ -1.88
SMAD3-209ENST00000558894 NUPR1O60356 82 aa3.3□□□□□ -1.88
SMAD3-209ENST00000558894 KIAA1644Q3SXP7 199 aa3.3□□□□□ -1.88
SMAD3-209ENST00000558894 Q6ZVH6 145 aa3.3□□□□□ -1.88
SMAD3-209ENST00000558894 TOMM6Q96B49 74 aa3.3□□□□□ -1.88
SMAD3-209ENST00000558894 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
SMAD3-209ENST00000558894 C22orf24Q9Y442 160 aa3.3□□□□□ -1.88
SMAD3-209ENST00000558894 IGLV1-50A0A075B6I6 118 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 SMIM1B2RUZ4 78 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 SYS1-DBNDD2H3BUS1 97 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 ZNF861PO60384 105 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 COX8AP10176 69 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 HERVK_113P63121 156 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 URB1-AS1Q96HZ7 61 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 PPDPFQ9H3Y8 114 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 XAGE1AQ9HD64 81 aa3.29□□□□□ -1.88
SMAD3-209ENST00000558894 NXT2Q9NPJ8 142 aaKnown RBP3.29□□□□□ -1.88
SMAD3-209ENST00000558894 A0A087X002 238 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 A0A096LNJ9 63 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 TINCRA0A1B0GVN0 87 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 F8VRH5 84 aa3.28□□□□□ -1.88
SMAD3-209ENST00000558894 H3BUT2 72 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms