RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
ZEB1-211ENST00000558440 FP248Q71RG6 208 aaPredicted RBP3.42□□□□□ -1.86
ZEB1-211ENST00000558440 KRTAP13-1Q8IUC0 172 aa3.42□□□□□ -1.86
ZEB1-211ENST00000558440 NKAPP1Q8N9T2 125 aa3.42□□□□□ -1.86
ZEB1-211ENST00000558440 EIF5A2Q9GZV4 153 aaKnown RBP3.42□□□□□ -1.86
ZEB1-211ENST00000558440 BATF3Q9NR55 127 aa3.42□□□□□ -1.86
ZEB1-211ENST00000558440 V9GYV3 84 aa3.42□□□□□ -1.86
ZEB1-211ENST00000558440 F8W036 122 aa3.41□□□□□ -1.86
ZEB1-211ENST00000558440 PPBPP02775 128 aa3.41□□□□□ -1.86
ZEB1-211ENST00000558440 S100A8P05109 93 aa3.41□□□□□ -1.86
ZEB1-211ENST00000558440 CXCL5P42830 114 aa3.41□□□□□ -1.86
ZEB1-211ENST00000558440 PNRC1Q12796 327 aaPredicted RBP3.41□□□□□ -1.86
ZEB1-211ENST00000558440 FAM74A3Q4VXF1 159 aa3.41□□□□□ -1.86
ZEB1-211ENST00000558440 SPAG11AQ6PDA7 123 aa3.41□□□□□ -1.86
ZEB1-211ENST00000558440 VCX2Q9H322 139 aa3.41□□□□□ -1.86
ZEB1-211ENST00000558440 IGKV2-28A0A075B6P5 120 aa3.4□□□□□ -1.87
ZEB1-211ENST00000558440 SMIM27A0A1W2PRY6 76 aa3.4□□□□□ -1.87
ZEB1-211ENST00000558440 IGKV2D-28P01615 120 aa3.4□□□□□ -1.87
ZEB1-211ENST00000558440 SEC11AP67812 179 aa3.4□□□□□ -1.87
ZEB1-211ENST00000558440 PRLHP81277 87 aa3.4□□□□□ -1.87
ZEB1-211ENST00000558440 MRPL54Q6P161 138 aaKnown RBP3.4□□□□□ -1.87
ZEB1-211ENST00000558440 FAM19A1Q7Z5A9 133 aa3.4□□□□□ -1.87
ZEB1-211ENST00000558440 ORMDL3Q8N138 153 aa3.4□□□□□ -1.87
ZEB1-211ENST00000558440 CYSLTR1Q9Y271 337 aa3.4□□□□□ -1.87
ZEB1-211ENST00000558440 HERVK_113P63121 156 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 ADIRFQ15847 76 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 C2orf66Q6UXQ4 117 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 TMEM136Q6ZRR5 245 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 C3orf22Q8N5N4 141 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 PRELID3AQ96N28 172 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 AMELXQ99217 191 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 GEMIN7Q9H840 131 aaKnown RBP3.39□□□□□ -1.87
ZEB1-211ENST00000558440 CDKN2A-AS1Q9UH64 79 aa3.39□□□□□ -1.87
ZEB1-211ENST00000558440 LOC389332A0A1B0GUA5 103 aa3.38□□□□□ -1.87
ZEB1-211ENST00000558440 A0A1B0GVG6 124 aa3.38□□□□□ -1.87
ZEB1-211ENST00000558440 SRP19P09132 144 aaKnown RBP3.38□□□□□ -1.87
ZEB1-211ENST00000558440 RAB5BP61020 215 aa3.38□□□□□ -1.87
ZEB1-211ENST00000558440 RPL23P62829 140 aaKnown RBP3.38□□□□□ -1.87
ZEB1-211ENST00000558440 ALKAL2Q6UX46 152 aa3.38□□□□□ -1.87
ZEB1-211ENST00000558440 FAM19A3Q7Z5A8 133 aa3.38□□□□□ -1.87
ZEB1-211ENST00000558440 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
ZEB1-211ENST00000558440 A0A1B0GXF2 115 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 SCO1O75880 301 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 ORMDL2Q53FV1 153 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 CBLN2Q8IUK8 224 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 TCTE3Q8IZS6 198 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 COX7B2Q8TF08 81 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 GNB1LQ9BYB4 327 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 TMEM126AQ9H061 195 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 MAP1LC3AQ9H492 121 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 NAT8Q9UHE5 227 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 NDUFA12Q9UI09 145 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 LAMTOR2Q9Y2Q5 125 aa3.37□□□□□ -1.87
ZEB1-211ENST00000558440 TMEM238C9JI98 176 aa3.36□□□□□ -1.87
ZEB1-211ENST00000558440 PDZD11Q5EBL8 140 aa3.36□□□□□ -1.87
ZEB1-211ENST00000558440 Q8N8P6 123 aa3.36□□□□□ -1.87
ZEB1-211ENST00000558440 DAND5Q8N907 189 aa3.36□□□□□ -1.87
ZEB1-211ENST00000558440 Q8NBF4 154 aa3.36□□□□□ -1.87
ZEB1-211ENST00000558440 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
ZEB1-211ENST00000558440 ZNF706Q9Y5V0 76 aaPredicted RBP3.36□□□□□ -1.87
ZEB1-211ENST00000558440 IGIPA6NJ69 53 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 K7EMI3 77 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 M0R378 163 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 ATP5LO75964 103 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 SPINK1P00995 79 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 G0S2P27469 103 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 ATP5L2Q7Z4Y8 100 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 FAM19A2Q8N3H0 131 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 SPRR4Q96PI1 79 aa3.35□□□□□ -1.87
ZEB1-211ENST00000558440 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
ZEB1-211ENST00000558440 PFN2P35080 140 aa3.34□□□□□ -1.87
ZEB1-211ENST00000558440 TIMM17AQ99595 171 aa3.34□□□□□ -1.87
ZEB1-211ENST00000558440 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
ZEB1-211ENST00000558440 SPINK8P0C7L1 97 aa3.33□□□□□ -1.88
ZEB1-211ENST00000558440 VPREB1P12018 145 aa3.33□□□□□ -1.88
ZEB1-211ENST00000558440 RAB14P61106 215 aa3.33□□□□□ -1.88
ZEB1-211ENST00000558440 SNRPEP62304 92 aaKnown RBP3.33□□□□□ -1.88
ZEB1-211ENST00000558440 NXT2Q9NPJ8 142 aaKnown RBP3.33□□□□□ -1.88
ZEB1-211ENST00000558440 H3BRM9 83 aa3.32□□□□□ -1.88
ZEB1-211ENST00000558440 MT1HP80294 61 aa3.32□□□□□ -1.88
ZEB1-211ENST00000558440 ERASQ7Z444 233 aa3.32□□□□□ -1.88
ZEB1-211ENST00000558440 TOMM6Q96B49 74 aa3.32□□□□□ -1.88
ZEB1-211ENST00000558440 SCGB3A1Q96QR1 104 aa3.32□□□□□ -1.88
ZEB1-211ENST00000558440 SND1-IT1Q9HBX3 110 aa3.32□□□□□ -1.88
ZEB1-211ENST00000558440 SLC25A20O43772 301 aa3.31□□□□□ -1.88
ZEB1-211ENST00000558440 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
ZEB1-211ENST00000558440 PEA15Q15121 130 aa3.31□□□□□ -1.88
ZEB1-211ENST00000558440 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
ZEB1-211ENST00000558440 AKAP14Q86UN6 197 aa3.31□□□□□ -1.88
ZEB1-211ENST00000558440 ERG28Q9UKR5 140 aa3.31□□□□□ -1.88
ZEB1-211ENST00000558440 SSPOA2VEC9 5147 aa3.31□□□□□ -1.88
ZEB1-211ENST00000558440 C9JQL5 133 aa3.3□□□□□ -1.88
ZEB1-211ENST00000558440 M0R2T5 61 aa3.3□□□□□ -1.88
ZEB1-211ENST00000558440 RPS29P62273 56 aaKnown RBP3.3□□□□□ -1.88
ZEB1-211ENST00000558440 COX17Q14061 63 aa3.3□□□□□ -1.88
ZEB1-211ENST00000558440 Q8N377 158 aa3.3□□□□□ -1.88
ZEB1-211ENST00000558440 CST9LQ9H4G1 147 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms