RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 COPS9Q8WXC6 57 aa10.52□□□□□ -0.73
PCNX4-213ENST00000556907 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
PCNX4-213ENST00000556907 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
PCNX4-213ENST00000556907 LINC00308Q8TCZ7 52 aa10.51□□□□□ -0.73
PCNX4-213ENST00000556907 LOC107984156A0A0G2JMH3 177 aa10.5□□□□□ -0.73
PCNX4-213ENST00000556907 XGP55808 180 aa10.5□□□□□ -0.73
PCNX4-213ENST00000556907 BVES-AS1Q5T3Y7 98 aa10.5□□□□□ -0.73
PCNX4-213ENST00000556907 SOSTDC1Q6X4U4 206 aa10.5□□□□□ -0.73
PCNX4-213ENST00000556907 ARL17AQ8IVW1 177 aa10.5□□□□□ -0.73
PCNX4-213ENST00000556907 FAM30AQ9NZY2 134 aa10.5□□□□□ -0.73
PCNX4-213ENST00000556907 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
PCNX4-213ENST00000556907 FXYD2P54710 66 aa10.48□□□□□ -0.73
PCNX4-213ENST00000556907 RPL24P83731 157 aaKnown RBP10.48□□□□□ -0.73
PCNX4-213ENST00000556907 MUSTN1Q8IVN3 82 aa10.48□□□□□ -0.73
PCNX4-213ENST00000556907 SND1-IT1Q9HBX3 110 aa10.48□□□□□ -0.73
PCNX4-213ENST00000556907 KIAA1109Q2LD37 5005 aa10.48□□□□□ -0.73
PCNX4-213ENST00000556907 APOBP04114 4563 aaKnown RBP10.48□□□□□ -0.73
PCNX4-213ENST00000556907 TMEM238LA0A1B0GVL6 79 aa10.47□□□□□ -0.73
PCNX4-213ENST00000556907 A6NJY4 79 aa10.47□□□□□ -0.73
PCNX4-213ENST00000556907 HINT1P49773 126 aaPredicted RBP10.47□□□□□ -0.73
PCNX4-213ENST00000556907 NPC2P61916 151 aa10.47□□□□□ -0.73
PCNX4-213ENST00000556907 Q6ZRP5 223 aa10.47□□□□□ -0.73
PCNX4-213ENST00000556907 EIF4EBP3O60516 100 aaPredicted RBP10.46□□□□□ -0.73
PCNX4-213ENST00000556907 RPL18AQ02543 176 aaKnown RBP10.46□□□□□ -0.73
PCNX4-213ENST00000556907 SPACA4Q8TDM5 124 aa10.46□□□□□ -0.73
PCNX4-213ENST00000556907 DPH3Q96FX2 82 aa10.45□□□□□ -0.74
PCNX4-213ENST00000556907 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
PCNX4-213ENST00000556907 RYR1P21817 5038 aa10.45□□□□□ -0.74
PCNX4-213ENST00000556907 A4D1N5 150 aa10.44□□□□□ -0.74
PCNX4-213ENST00000556907 SCXQ7RTU7 201 aa10.44□□□□□ -0.74
PCNX4-213ENST00000556907 CIRBP-AS1Q8TBR5 109 aa10.44□□□□□ -0.74
PCNX4-213ENST00000556907 SNHG12Q9BXW3 62 aa10.44□□□□□ -0.74
PCNX4-213ENST00000556907 A0A096LNI7 61 aa10.43□□□□□ -0.74
PCNX4-213ENST00000556907 IGKV2-24A0A0C4DH68 120 aa10.43□□□□□ -0.74
PCNX4-213ENST00000556907 NDUFC2O95298 119 aa10.42□□□□□ -0.74
PCNX4-213ENST00000556907 GAGE2BQ13066 116 aa10.42□□□□□ -0.74
PCNX4-213ENST00000556907 GAGE2EQ4V326 116 aa10.42□□□□□ -0.74
PCNX4-213ENST00000556907 XAGE1AQ9HD64 81 aa10.42□□□□□ -0.74
PCNX4-213ENST00000556907 GAGE2DQ9UEU5 116 aa10.42□□□□□ -0.74
PCNX4-213ENST00000556907 A0A0B4J2C4 111 aa10.41□□□□□ -0.74
PCNX4-213ENST00000556907 A0A1B0GWB2 263 aa10.41□□□□□ -0.74
PCNX4-213ENST00000556907 A6NDN8 102 aa10.41□□□□□ -0.74
PCNX4-213ENST00000556907 PANO1I0J062 215 aa10.41□□□□□ -0.74
PCNX4-213ENST00000556907 CHTF8P0CG12 524 aa10.41□□□□□ -0.74
PCNX4-213ENST00000556907 BATFQ16520 125 aa10.41□□□□□ -0.74
PCNX4-213ENST00000556907 C9orf129Q5T035 196 aaKnown RBP10.41□□□□□ -0.74
PCNX4-213ENST00000556907 PLAC8Q9NZF1 115 aa10.41□□□□□ -0.74
PCNX4-213ENST00000556907 A0A087WYN8 130 aa10.4□□□□□ -0.74
PCNX4-213ENST00000556907 NHP2Q9NX24 153 aaKnown RBP10.4□□□□□ -0.74
PCNX4-213ENST00000556907 PLA2G2DQ9UNK4 145 aa10.4□□□□□ -0.74
PCNX4-213ENST00000556907 Q8N1X5 172 aa10.39□□□□□ -0.75
PCNX4-213ENST00000556907 HSPG2P98160 4391 aa10.39□□□□□ -0.75
PCNX4-213ENST00000556907 CFC1BP0CG36 223 aa10.38□□□□□ -0.75
PCNX4-213ENST00000556907 CFC1P0CG37 223 aa10.38□□□□□ -0.75
PCNX4-213ENST00000556907 VPREB1P12018 145 aa10.38□□□□□ -0.75
PCNX4-213ENST00000556907 Q8NDZ9 215 aa10.38□□□□□ -0.75
PCNX4-213ENST00000556907 EPM2AB3EWF7 344 aa10.37□□□□□ -0.75
PCNX4-213ENST00000556907 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
PCNX4-213ENST00000556907 HAMPP81172 84 aa10.37□□□□□ -0.75
PCNX4-213ENST00000556907 IGLV5-37A0A075B6J1 123 aa10.36□□□□□ -0.75
PCNX4-213ENST00000556907 IGKV2-28A0A075B6P5 120 aa10.36□□□□□ -0.75
PCNX4-213ENST00000556907 IGKV2D-28P01615 120 aa10.36□□□□□ -0.75
PCNX4-213ENST00000556907 HERC2O95714 4834 aa10.36□□□□□ -0.75
PCNX4-213ENST00000556907 TRBV10-2A0A0K0K1G8 114 aa10.35□□□□□ -0.75
PCNX4-213ENST00000556907 K7ERJ3 54 aa10.35□□□□□ -0.75
PCNX4-213ENST00000556907 SMR3BP02814 79 aaPredicted RBP10.34□□□□□ -0.75
PCNX4-213ENST00000556907 LINC00337Q8N6G1 96 aa10.34□□□□□ -0.75
PCNX4-213ENST00000556907 RAB37Q96AX2 223 aa10.34□□□□□ -0.75
PCNX4-213ENST00000556907 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
PCNX4-213ENST00000556907 NCR3O14931 201 aa10.33□□□□□ -0.76
PCNX4-213ENST00000556907 COL5A1-AS1Q5SY13 56 aa10.33□□□□□ -0.76
PCNX4-213ENST00000556907 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
PCNX4-213ENST00000556907 LINC00528Q8N1L1 170 aa10.32□□□□□ -0.76
PCNX4-213ENST00000556907 C7orf33Q8WU49 177 aa10.32□□□□□ -0.76
PCNX4-213ENST00000556907 PRO1854Q9UHT4 67 aa10.32□□□□□ -0.76
PCNX4-213ENST00000556907 A0A1W2PNN7 141 aa10.31□□□□□ -0.76
PCNX4-213ENST00000556907 FAM168BA1KXE4 195 aa10.31□□□□□ -0.76
PCNX4-213ENST00000556907 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
PCNX4-213ENST00000556907 RPL13AP40429 203 aaKnown RBP10.31□□□□□ -0.76
PCNX4-213ENST00000556907 LBHQ53QV2 105 aaPredicted RBP10.31□□□□□ -0.76
PCNX4-213ENST00000556907 KRTAP7-1Q8IUC3 87 aa10.31□□□□□ -0.76
PCNX4-213ENST00000556907 M0R378 163 aa10.3□□□□□ -0.76
PCNX4-213ENST00000556907 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
PCNX4-213ENST00000556907 NKAPP1Q8N9T2 125 aa10.3□□□□□ -0.76
PCNX4-213ENST00000556907 PRR3P79522 188 aaKnown RBP10.29□□□□□ -0.76
PCNX4-213ENST00000556907 Q5VSD8 79 aa10.29□□□□□ -0.76
PCNX4-213ENST00000556907 TAX1BP3O14907 124 aa10.28□□□□□ -0.76
PCNX4-213ENST00000556907 FAT1Q14517 4588 aa10.28□□□□□ -0.76
PCNX4-213ENST00000556907 M0QXV9 152 aa10.27□□□□□ -0.77
PCNX4-213ENST00000556907 TSPAN13O95857 204 aa10.27□□□□□ -0.77
PCNX4-213ENST00000556907 IGLV6-57P01721 117 aa10.27□□□□□ -0.77
PCNX4-213ENST00000556907 TMEM126AQ9H061 195 aa10.27□□□□□ -0.77
PCNX4-213ENST00000556907 RPL37AP61513 92 aaKnown RBP10.25□□□□□ -0.77
PCNX4-213ENST00000556907 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
PCNX4-213ENST00000556907 MRPL55Q7Z7F7 128 aaKnown RBP10.25□□□□□ -0.77
PCNX4-213ENST00000556907 OR13C6PQ8NH95 151 aa10.25□□□□□ -0.77
PCNX4-213ENST00000556907 C22orf24Q9Y442 160 aa10.25□□□□□ -0.77
PCNX4-213ENST00000556907 TRBV10-3A0A0K0K1G6 114 aa10.24□□□□□ -0.77
PCNX4-213ENST00000556907 Q1RN00 199 aa10.24□□□□□ -0.77
PCNX4-213ENST00000556907 KRTAP17-1Q9BYP8 105 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms