RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
SLIRP-207ENST00000556831 CBY1Q9Y3M2 126 aa8.93□□□□□ -0.98
SLIRP-207ENST00000556831 FAT3Q8TDW7 4589 aa8.92□□□□□ -0.98
SLIRP-207ENST00000556831 TINCRA0A1B0GVN0 87 aa8.92□□□□□ -0.98
SLIRP-207ENST00000556831 F8VRH5 84 aa8.92□□□□□ -0.98
SLIRP-207ENST00000556831 NMUP48645 174 aa8.92□□□□□ -0.98
SLIRP-207ENST00000556831 C2orf91Q6ZV80 131 aa8.92□□□□□ -0.98
SLIRP-207ENST00000556831 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
SLIRP-207ENST00000556831 TRBV30A0A0K0K1B3 111 aa8.91□□□□□ -0.98
SLIRP-207ENST00000556831 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
SLIRP-207ENST00000556831 HERVK_113P61574 105 aa8.91□□□□□ -0.98
SLIRP-207ENST00000556831 UNQ6190/PRO20217Q6UXQ8 127 aa8.91□□□□□ -0.98
SLIRP-207ENST00000556831 Q8IZM0 81 aa8.91□□□□□ -0.98
SLIRP-207ENST00000556831 CDKN2A-AS1Q9UH64 79 aa8.91□□□□□ -0.98
SLIRP-207ENST00000556831 C9orf118A6NHY6 69 aa8.89□□□□□ -0.99
SLIRP-207ENST00000556831 CXCL5P42830 114 aa8.89□□□□□ -0.99
SLIRP-207ENST00000556831 KIAA0087Q14695 138 aa8.89□□□□□ -0.99
SLIRP-207ENST00000556831 C10orf25Q5T742 122 aa8.89□□□□□ -0.99
SLIRP-207ENST00000556831 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
SLIRP-207ENST00000556831 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
SLIRP-207ENST00000556831 CHTOPQ9Y3Y2 248 aaKnown RBP8.89□□□□□ -0.99
SLIRP-207ENST00000556831 GAGE2EQ4V326 116 aa8.88□□□□□ -0.99
SLIRP-207ENST00000556831 GAGE2DQ9UEU5 116 aa8.88□□□□□ -0.99
SLIRP-207ENST00000556831 TLX1NBP0CAT3 122 aa8.87□□□□□ -0.99
SLIRP-207ENST00000556831 SMIM13P0DJ93 91 aa8.87□□□□□ -0.99
SLIRP-207ENST00000556831 PLA2G2DQ9UNK4 145 aa8.87□□□□□ -0.99
SLIRP-207ENST00000556831 IGLV5-45A0A087WSX0 123 aa8.86□□□□□ -0.99
SLIRP-207ENST00000556831 TMEM238LA0A1B0GVL6 79 aa8.86□□□□□ -0.99
SLIRP-207ENST00000556831 GAGE10A6NGK3 116 aa8.86□□□□□ -0.99
SLIRP-207ENST00000556831 A6NJY4 79 aa8.86□□□□□ -0.99
SLIRP-207ENST00000556831 SMIM1B2RUZ4 78 aa8.86□□□□□ -0.99
SLIRP-207ENST00000556831 NDUFC2-KCTD14E9PQ53 114 aa8.86□□□□□ -0.99
SLIRP-207ENST00000556831 C9orf116Q5BN46 136 aaPredicted RBP8.86□□□□□ -0.99
SLIRP-207ENST00000556831 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
SLIRP-207ENST00000556831 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
SLIRP-207ENST00000556831 FABP2P12104 132 aa8.85□□□□□ -0.99
SLIRP-207ENST00000556831 Q6ZRP5 223 aa8.85□□□□□ -0.99
SLIRP-207ENST00000556831 K7ERU9 68 aa8.84□□□□□ -0.99
SLIRP-207ENST00000556831 E9PLD3 99 aa8.83□□□□□ -1
SLIRP-207ENST00000556831 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
SLIRP-207ENST00000556831 LYRM7Q5U5X0 104 aa8.83□□□□□ -1
SLIRP-207ENST00000556831 FAM19A5Q7Z5A7 132 aaPredicted RBP8.83□□□□□ -1
SLIRP-207ENST00000556831 PCP2Q8IVA1 136 aa8.83□□□□□ -1
SLIRP-207ENST00000556831 MYMXA0A1B0GTQ4 84 aa8.82□□□□□ -1
SLIRP-207ENST00000556831 A0A1W2PNN7 141 aa8.82□□□□□ -1
SLIRP-207ENST00000556831 K7EP34 96 aa8.82□□□□□ -1
SLIRP-207ENST00000556831 TMEM170BQ5T4T1 132 aa8.82□□□□□ -1
SLIRP-207ENST00000556831 CEND1Q8N111 149 aa8.82□□□□□ -1
SLIRP-207ENST00000556831 A0A1W2PPM0 123 aa8.8□□□□□ -1
SLIRP-207ENST00000556831 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
SLIRP-207ENST00000556831 ZNF22P17026 224 aaPredicted RBP8.8□□□□□ -1
SLIRP-207ENST00000556831 HIST1H4GQ99525 98 aa8.8□□□□□ -1
SLIRP-207ENST00000556831 H3BUT2 72 aa8.79□□□□□ -1
SLIRP-207ENST00000556831 M0QXV9 152 aa8.79□□□□□ -1
SLIRP-207ENST00000556831 OXTP01178 125 aa8.79□□□□□ -1
SLIRP-207ENST00000556831 UBE2BP63146 152 aa8.79□□□□□ -1
SLIRP-207ENST00000556831 PHF5AQ7RTV0 110 aaKnown RBP8.79□□□□□ -1
SLIRP-207ENST00000556831 IGKV2D-26A0A0A0MRZ7 120 aa8.78□□□□□ -1
SLIRP-207ENST00000556831 FAM168BA1KXE4 195 aa8.78□□□□□ -1
SLIRP-207ENST00000556831 C11orf86A6NJI1 115 aa8.78□□□□□ -1
SLIRP-207ENST00000556831 SFTA2Q6UW10 78 aa8.78□□□□□ -1
SLIRP-207ENST00000556831 SPCS1Q9Y6A9 102 aa8.78□□□□□ -1
SLIRP-207ENST00000556831 SCGB1D4Q6XE38 83 aa8.77□□□□□ -1.01
SLIRP-207ENST00000556831 XAGE1AQ9HD64 81 aa8.77□□□□□ -1.01
SLIRP-207ENST00000556831 TP73-AS1Q9UF72 201 aa8.77□□□□□ -1.01
SLIRP-207ENST00000556831 IGLV5-39A0A0G2JS06 123 aa8.76□□□□□ -1.01
SLIRP-207ENST00000556831 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
SLIRP-207ENST00000556831 C9orf129Q5T035 196 aaKnown RBP8.76□□□□□ -1.01
SLIRP-207ENST00000556831 A0A1B0GWB2 263 aa8.75□□□□□ -1.01
SLIRP-207ENST00000556831 ZNF815PA8K554 130 aa8.75□□□□□ -1.01
SLIRP-207ENST00000556831 J3QR89 54 aa8.75□□□□□ -1.01
SLIRP-207ENST00000556831 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
SLIRP-207ENST00000556831 NHP2Q9NX24 153 aaKnown RBP8.75□□□□□ -1.01
SLIRP-207ENST00000556831 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
SLIRP-207ENST00000556831 LGALS3P17931 250 aaKnown RBP8.74□□□□□ -1.01
SLIRP-207ENST00000556831 FXYD2P54710 66 aa8.74□□□□□ -1.01
SLIRP-207ENST00000556831 OCIAD2Q56VL3 154 aa8.74□□□□□ -1.01
SLIRP-207ENST00000556831 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
SLIRP-207ENST00000556831 SPINK6Q6UWN8 80 aa8.74□□□□□ -1.01
SLIRP-207ENST00000556831 Q6ZVH6 145 aa8.74□□□□□ -1.01
SLIRP-207ENST00000556831 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-207ENST00000556831 PFN2P35080 140 aa8.73□□□□□ -1.01
SLIRP-207ENST00000556831 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.01
SLIRP-207ENST00000556831 NKAPP1Q8N9T2 125 aa8.72□□□□□ -1.01
SLIRP-207ENST00000556831 RAB37Q96AX2 223 aa8.72□□□□□ -1.01
SLIRP-207ENST00000556831 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
SLIRP-207ENST00000556831 TMEM223A0PJW6 202 aa8.71□□□□□ -1.02
SLIRP-207ENST00000556831 F8W1H4 67 aa8.71□□□□□ -1.02
SLIRP-207ENST00000556831 LEPROTO15243 131 aa8.71□□□□□ -1.02
SLIRP-207ENST00000556831 COX17Q14061 63 aa8.71□□□□□ -1.02
SLIRP-207ENST00000556831 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
SLIRP-207ENST00000556831 C22orf24Q9Y442 160 aa8.7□□□□□ -1.02
SLIRP-207ENST00000556831 TMEM238C9JI98 176 aa8.69□□□□□ -1.02
SLIRP-207ENST00000556831 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
SLIRP-207ENST00000556831 VPS25Q9BRG1 176 aa8.69□□□□□ -1.02
SLIRP-207ENST00000556831 TNXBP22105 4242 aa8.69□□□□□ -1.02
SLIRP-207ENST00000556831 J3QQQ9 107 aa8.68□□□□□ -1.02
SLIRP-207ENST00000556831 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
SLIRP-207ENST00000556831 TTTY13Q9BZ97 58 aa8.68□□□□□ -1.02
SLIRP-207ENST00000556831 MUC2Q02817 5179 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms