RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 LINC00862A6NCI5 91 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 TSPAN13O95857 204 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 RAB4AP20338 218 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 RAB5AP20339 215 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 CKS2P33552 79 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 CKS1BP61024 79 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 SLC51BQ86UW2 128 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 SMIM7Q9BQ49 75 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 C20orf78Q9BR46 151 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 EIF5A2Q9GZV4 153 aaKnown RBP2.76□□□□□ -1.97
HIF1A-209ENST00000556827 SMDT1Q9H4I9 107 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 HMCN2Q8NDA2 5059 aa2.76□□□□□ -1.97
HIF1A-209ENST00000556827 LRP1Q07954 4544 aaKnown RBP2.75□□□□□ -1.97
HIF1A-209ENST00000556827 IGHV3OR16-9A0A0B4J2B5 98 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 TRBV30A0A0K0K1B3 111 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 A0A1B0GVX0 72 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 ZNF727A8MUV8 499 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 NDUFC2-KCTD14E9PQ53 114 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 F8W036 122 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 SMKR1H3BMG3 65 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 NUPR1O60356 82 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 S100A8P05109 93 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 CRYGAP11844 174 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 IFI27P40305 119 aaPredicted RBP2.75□□□□□ -1.97
HIF1A-209ENST00000556827 RPL28P46779 137 aaKnown RBP2.75□□□□□ -1.97
HIF1A-209ENST00000556827 C6orf226Q5I0X4 101 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 Q6ZUT4 128 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 C2orf88Q9BSF0 95 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 OSTCQ9NRP0 149 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 NAT8BQ9UHF3 227 aa2.75□□□□□ -1.97
HIF1A-209ENST00000556827 PPBPP02775 128 aa2.74□□□□□ -1.97
HIF1A-209ENST00000556827 MRPS36P82909 103 aaKnown RBP2.74□□□□□ -1.97
HIF1A-209ENST00000556827 C5orf47Q569G3 176 aa2.74□□□□□ -1.97
HIF1A-209ENST00000556827 FAM104BQ5XKR9 115 aa2.74□□□□□ -1.97
HIF1A-209ENST00000556827 C6orf48Q9UBA6 75 aa2.74□□□□□ -1.97
HIF1A-209ENST00000556827 RPL39P62891 51 aaKnown RBP2.73□□□□□ -1.97
HIF1A-209ENST00000556827 SEC11AP67812 179 aa2.73□□□□□ -1.97
HIF1A-209ENST00000556827 MRPL51Q4U2R6 128 aaKnown RBP2.73□□□□□ -1.97
HIF1A-209ENST00000556827 C2orf82Q6UX34 121 aa2.73□□□□□ -1.97
HIF1A-209ENST00000556827 TEX43Q6ZNM6 134 aa2.73□□□□□ -1.97
HIF1A-209ENST00000556827 SMIM2Q9BVW6 85 aa2.73□□□□□ -1.97
HIF1A-209ENST00000556827 TOMM7Q9P0U1 55 aa2.73□□□□□ -1.97
HIF1A-209ENST00000556827 C22orf24Q9Y442 160 aa2.73□□□□□ -1.97
HIF1A-209ENST00000556827 TRBV24-1A0A075B6N3 115 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 IGKV2D-26A0A0A0MRZ7 120 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 COLCA2A8K830 154 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 D6R8Y8 96 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 BCE1O60756 84 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 G0S2P27469 103 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 ALKAL2Q6UX46 152 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 MRPL55Q7Z7F7 128 aaKnown RBP2.72□□□□□ -1.97
HIF1A-209ENST00000556827 TCTE3Q8IZS6 198 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 ORMDL3Q8N138 153 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 TMEM141Q96I45 108 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
HIF1A-209ENST00000556827 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
HIF1A-209ENST00000556827 F8VRH5 84 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 ADIRFQ15847 76 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 TMEM136Q6ZRR5 245 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 LINC00469Q8N7U9 141 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 XAGE1AQ9HD64 81 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 TP73-AS1Q9UF72 201 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 NAT8Q9UHE5 227 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 CYSLTR1Q9Y271 337 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 V9GYV3 84 aa2.71□□□□□ -1.98
HIF1A-209ENST00000556827 SMIM27A0A1W2PRY6 76 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 NPYP01303 97 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 HERVK_113P63121 156 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 CTAG1AP78358 180 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 ORMDL2Q53FV1 153 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 Q5W150 140 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 MRPL54Q6P161 138 aaKnown RBP2.7□□□□□ -1.98
HIF1A-209ENST00000556827 Q8IZM0 81 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 LINC00337Q8N6G1 96 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 LINC00304Q8N9R0 145 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 PRELID3AQ96N28 172 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 MAP1LC3AQ9H492 121 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 LAMTOR2Q9Y2Q5 125 aa2.7□□□□□ -1.98
HIF1A-209ENST00000556827 LOC389332A0A1B0GUA5 103 aa2.69□□□□□ -1.98
HIF1A-209ENST00000556827 K7EMI3 77 aa2.69□□□□□ -1.98
HIF1A-209ENST00000556827 SRP19P09132 144 aaKnown RBP2.69□□□□□ -1.98
HIF1A-209ENST00000556827 RPL23P62829 140 aaKnown RBP2.69□□□□□ -1.98
HIF1A-209ENST00000556827 PEA15Q15121 130 aa2.69□□□□□ -1.98
HIF1A-209ENST00000556827 TPRXLQ17RH7 258 aa2.69□□□□□ -1.98
HIF1A-209ENST00000556827 FAM229BQ4G0N7 80 aa2.69□□□□□ -1.98
HIF1A-209ENST00000556827 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
HIF1A-209ENST00000556827 AKAP14Q86UN6 197 aa2.69□□□□□ -1.98
HIF1A-209ENST00000556827 FAT3Q8TDW7 4589 aa2.68□□□□□ -1.98
HIF1A-209ENST00000556827 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
HIF1A-209ENST00000556827 ATP5L2Q7Z4Y8 100 aa2.68□□□□□ -1.98
HIF1A-209ENST00000556827 RETNLBQ9BQ08 111 aa2.68□□□□□ -1.98
HIF1A-209ENST00000556827 NXT2Q9NPJ8 142 aaKnown RBP2.68□□□□□ -1.98
HIF1A-209ENST00000556827 DNAH8Q96JB1 4490 aa2.68□□□□□ -1.98
HIF1A-209ENST00000556827 A0A1B0GVG6 124 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 LINC01549A6NIU2 74 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 H3BRM9 83 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 RAB5BP61020 215 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 LRP2P98164 4655 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 PDZD11Q5EBL8 140 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms