RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 VPREB1P12018 145 aa6.24□□□□□ -1.41
SPTLC2-205ENST00000556607 SFTA2Q6UW10 78 aa6.24□□□□□ -1.41
SPTLC2-205ENST00000556607 TMEM126AQ9H061 195 aa6.24□□□□□ -1.41
SPTLC2-205ENST00000556607 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
SPTLC2-205ENST00000556607 TMEM238C9JI98 176 aa6.23□□□□□ -1.41
SPTLC2-205ENST00000556607 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
SPTLC2-205ENST00000556607 H0Y8G0 127 aa6.22□□□□□ -1.41
SPTLC2-205ENST00000556607 MEIG1Q5JSS6 88 aa6.22□□□□□ -1.41
SPTLC2-205ENST00000556607 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.42
SPTLC2-205ENST00000556607 CBLN2Q8IUK8 224 aa6.21□□□□□ -1.42
SPTLC2-205ENST00000556607 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
SPTLC2-205ENST00000556607 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.42
SPTLC2-205ENST00000556607 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
SPTLC2-205ENST00000556607 M0R378 163 aa6.2□□□□□ -1.42
SPTLC2-205ENST00000556607 HSBP1O75506 76 aa6.2□□□□□ -1.42
SPTLC2-205ENST00000556607 FAM229BQ4G0N7 80 aa6.2□□□□□ -1.42
SPTLC2-205ENST00000556607 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
SPTLC2-205ENST00000556607 LINC00304Q8N9R0 145 aa6.2□□□□□ -1.42
SPTLC2-205ENST00000556607 TRAV12-1A0A0B4J245 112 aa6.19□□□□□ -1.42
SPTLC2-205ENST00000556607 SMIM13P0DJ93 91 aa6.19□□□□□ -1.42
SPTLC2-205ENST00000556607 FAM19A2Q8N3H0 131 aa6.19□□□□□ -1.42
SPTLC2-205ENST00000556607 Q8NDZ9 215 aa6.19□□□□□ -1.42
SPTLC2-205ENST00000556607 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
SPTLC2-205ENST00000556607 NCR3O14931 201 aa6.18□□□□□ -1.42
SPTLC2-205ENST00000556607 HERV-K104P63124 156 aa6.17□□□□□ -1.42
SPTLC2-205ENST00000556607 C4orf48Q5BLP8 95 aa6.17□□□□□ -1.42
SPTLC2-205ENST00000556607 BOD1L2Q8IYS8 172 aa6.17□□□□□ -1.42
SPTLC2-205ENST00000556607 MIR7-3HGQ8N6C7 128 aa6.17□□□□□ -1.42
SPTLC2-205ENST00000556607 PLEKHB2Q96CS7 222 aa6.17□□□□□ -1.42
SPTLC2-205ENST00000556607 LINC00587B1AMM8 73 aa6.16□□□□□ -1.42
SPTLC2-205ENST00000556607 NDUFA12Q9UI09 145 aa6.16□□□□□ -1.42
SPTLC2-205ENST00000556607 MYMXA0A1B0GTQ4 84 aa6.15□□□□□ -1.42
SPTLC2-205ENST00000556607 LEPROTL1O95214 131 aa6.15□□□□□ -1.42
SPTLC2-205ENST00000556607 TRGC2P03986 189 aa6.15□□□□□ -1.42
SPTLC2-205ENST00000556607 S100A12P80511 92 aa6.15□□□□□ -1.42
SPTLC2-205ENST00000556607 C3orf22Q8N5N4 141 aa6.15□□□□□ -1.42
SPTLC2-205ENST00000556607 YPEL4Q96NS1 127 aa6.15□□□□□ -1.42
SPTLC2-205ENST00000556607 MAP1LC3CQ9BXW4 147 aa6.15□□□□□ -1.42
SPTLC2-205ENST00000556607 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
SPTLC2-205ENST00000556607 ZNF706Q9Y5V0 76 aaPredicted RBP6.14□□□□□ -1.43
SPTLC2-205ENST00000556607 A0A0U1RQV1 116 aa6.13□□□□□ -1.43
SPTLC2-205ENST00000556607 PRYO14603 147 aa6.13□□□□□ -1.43
SPTLC2-205ENST00000556607 FABP4P15090 132 aa6.13□□□□□ -1.43
SPTLC2-205ENST00000556607 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
SPTLC2-205ENST00000556607 LEPROTO15243 131 aa6.12□□□□□ -1.43
SPTLC2-205ENST00000556607 SERF1AO75920 110 aa6.12□□□□□ -1.43
SPTLC2-205ENST00000556607 HERVK_113P61574 105 aa6.12□□□□□ -1.43
SPTLC2-205ENST00000556607 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
SPTLC2-205ENST00000556607 SPRR4Q96PI1 79 aa6.12□□□□□ -1.43
SPTLC2-205ENST00000556607 PPDPFQ9H3Y8 114 aa6.12□□□□□ -1.43
SPTLC2-205ENST00000556607 IGLV7-46A0A075B6I9 117 aa6.11□□□□□ -1.43
SPTLC2-205ENST00000556607 TRBV10-3A0A0K0K1G6 114 aa6.11□□□□□ -1.43
SPTLC2-205ENST00000556607 PLNP26678 52 aa6.11□□□□□ -1.43
SPTLC2-205ENST00000556607 DAND5Q8N907 189 aa6.11□□□□□ -1.43
SPTLC2-205ENST00000556607 MIEN1Q9BRT3 115 aa6.11□□□□□ -1.43
SPTLC2-205ENST00000556607 HSPB8Q9UJY1 196 aa6.11□□□□□ -1.43
SPTLC2-205ENST00000556607 LGALS3P17931 250 aaKnown RBP6.1□□□□□ -1.43
SPTLC2-205ENST00000556607 SPAG11AQ6PDA7 123 aa6.1□□□□□ -1.43
SPTLC2-205ENST00000556607 LINC00337Q8N6G1 96 aa6.1□□□□□ -1.43
SPTLC2-205ENST00000556607 PMCHL2Q9BQD1 86 aa6.1□□□□□ -1.43
SPTLC2-205ENST00000556607 KCNQ1DNQ9H478 68 aa6.1□□□□□ -1.43
SPTLC2-205ENST00000556607 J3QQQ9 107 aa6.09□□□□□ -1.43
SPTLC2-205ENST00000556607 DPM2O94777 84 aa6.09□□□□□ -1.43
SPTLC2-205ENST00000556607 IGKCP01834 107 aa6.09□□□□□ -1.43
SPTLC2-205ENST00000556607 DDTP30046 118 aa6.09□□□□□ -1.43
SPTLC2-205ENST00000556607 TSPEAR-AS2P59090 65 aa6.09□□□□□ -1.43
SPTLC2-205ENST00000556607 SPRR1AP35321 89 aa6.08□□□□□ -1.44
SPTLC2-205ENST00000556607 NPC2P61916 151 aa6.08□□□□□ -1.44
SPTLC2-205ENST00000556607 CTAG1AP78358 180 aa6.08□□□□□ -1.44
SPTLC2-205ENST00000556607 S100A7L2Q5SY68 101 aa6.08□□□□□ -1.44
SPTLC2-205ENST00000556607 GAGE2AQ6NT46 116 aa6.08□□□□□ -1.44
SPTLC2-205ENST00000556607 Q8NBF4 154 aa6.08□□□□□ -1.44
SPTLC2-205ENST00000556607 IGLV9-49A0A0B4J1Y8 123 aa6.07□□□□□ -1.44
SPTLC2-205ENST00000556607 LINC00310P59036 64 aa6.07□□□□□ -1.44
SPTLC2-205ENST00000556607 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
SPTLC2-205ENST00000556607 NMUP48645 174 aa6.06□□□□□ -1.44
SPTLC2-205ENST00000556607 SLC7A5P1Q8MH63 180 aa6.06□□□□□ -1.44
SPTLC2-205ENST00000556607 TRBV10-2A0A0K0K1G8 114 aa6.05□□□□□ -1.44
SPTLC2-205ENST00000556607 B5MCH6 92 aa6.05□□□□□ -1.44
SPTLC2-205ENST00000556607 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
SPTLC2-205ENST00000556607 SPANXB1Q9NS25 103 aaPredicted RBP6.05□□□□□ -1.44
SPTLC2-205ENST00000556607 ERC2-IT1O76042 136 aa6.04□□□□□ -1.44
SPTLC2-205ENST00000556607 MOBPQ13875 183 aa6.04□□□□□ -1.44
SPTLC2-205ENST00000556607 TRAV23DV6A0A075B6W5 121 aa6.03□□□□□ -1.44
SPTLC2-205ENST00000556607 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
SPTLC2-205ENST00000556607 COLCA2A8K830 154 aa6.03□□□□□ -1.44
SPTLC2-205ENST00000556607 SPINK1P00995 79 aa6.03□□□□□ -1.44
SPTLC2-205ENST00000556607 JOSD1Q15040 202 aaPredicted RBP6.03□□□□□ -1.44
SPTLC2-205ENST00000556607 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
SPTLC2-205ENST00000556607 A0A0J9YXY3 114 aa6.02□□□□□ -1.45
SPTLC2-205ENST00000556607 NDUFC2O95298 119 aa6.02□□□□□ -1.45
SPTLC2-205ENST00000556607 HINT1P49773 126 aaPredicted RBP6.02□□□□□ -1.45
SPTLC2-205ENST00000556607 C9orf153Q5TBE3 101 aa6.02□□□□□ -1.45
SPTLC2-205ENST00000556607 Q6ZRX8 168 aa6.02□□□□□ -1.45
SPTLC2-205ENST00000556607 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
SPTLC2-205ENST00000556607 Q9BRP9 147 aa6.02□□□□□ -1.45
SPTLC2-205ENST00000556607 MUC2Q02817 5179 aa6.02□□□□□ -1.45
SPTLC2-205ENST00000556607 E9PLD3 99 aa6.01□□□□□ -1.45
SPTLC2-205ENST00000556607 LINC00483Q53H64 154 aa6.01□□□□□ -1.45
SPTLC2-205ENST00000556607 OR13C6PQ8NH95 151 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms