RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 IFITM1P13164 125 aa7.9□□□□□ -1.14
SHMT2-221ENST00000555773 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.14
SHMT2-221ENST00000555773 DAND5Q8N907 189 aa7.9□□□□□ -1.14
SHMT2-221ENST00000555773 C12orf57Q99622 126 aa7.9□□□□□ -1.14
SHMT2-221ENST00000555773 MIEN1Q9BRT3 115 aa7.9□□□□□ -1.14
SHMT2-221ENST00000555773 SPANXDQ9BXN6 97 aa7.9□□□□□ -1.14
SHMT2-221ENST00000555773 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-221ENST00000555773 SPANXCQ9NY87 97 aa7.9□□□□□ -1.14
SHMT2-221ENST00000555773 HIGD1BQ9P298 99 aa7.9□□□□□ -1.14
SHMT2-221ENST00000555773 A0A1W2PNN7 141 aa7.89□□□□□ -1.15
SHMT2-221ENST00000555773 SRSF9Q13242 221 aaKnown RBP eCLIP7.89□□□□□ -1.15
SHMT2-221ENST00000555773 CIRBP-AS1Q8TBR5 109 aa7.89□□□□□ -1.15
SHMT2-221ENST00000555773 LINC00308Q8TCZ7 52 aa7.89□□□□□ -1.15
SHMT2-221ENST00000555773 PPDPFQ9H3Y8 114 aa7.89□□□□□ -1.15
SHMT2-221ENST00000555773 UQCR10Q9UDW1 63 aa7.89□□□□□ -1.15
SHMT2-221ENST00000555773 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
SHMT2-221ENST00000555773 APOBP04114 4563 aaKnown RBP7.87□□□□□ -1.15
SHMT2-221ENST00000555773 XGP55808 180 aa7.87□□□□□ -1.15
SHMT2-221ENST00000555773 SCXQ7RTU7 201 aa7.87□□□□□ -1.15
SHMT2-221ENST00000555773 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
SHMT2-221ENST00000555773 FAM168BA1KXE4 195 aa7.86□□□□□ -1.15
SHMT2-221ENST00000555773 NDUFC2O95298 119 aa7.86□□□□□ -1.15
SHMT2-221ENST00000555773 LBHQ53QV2 105 aaPredicted RBP7.86□□□□□ -1.15
SHMT2-221ENST00000555773 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
SHMT2-221ENST00000555773 TP73-AS1Q9UF72 201 aa7.86□□□□□ -1.15
SHMT2-221ENST00000555773 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
SHMT2-221ENST00000555773 VPREB1P12018 145 aa7.85□□□□□ -1.15
SHMT2-221ENST00000555773 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
SHMT2-221ENST00000555773 SOSTDC1Q6X4U4 206 aa7.85□□□□□ -1.15
SHMT2-221ENST00000555773 C2orf91Q6ZV80 131 aa7.85□□□□□ -1.15
SHMT2-221ENST00000555773 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
SHMT2-221ENST00000555773 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
SHMT2-221ENST00000555773 HIST1H4GQ99525 98 aa7.85□□□□□ -1.15
SHMT2-221ENST00000555773 C22orf24Q9Y442 160 aa7.85□□□□□ -1.15
SHMT2-221ENST00000555773 NPC2P61916 151 aa7.84□□□□□ -1.15
SHMT2-221ENST00000555773 TAL2Q16559 108 aa7.84□□□□□ -1.15
SHMT2-221ENST00000555773 NKAPP1Q8N9T2 125 aa7.84□□□□□ -1.15
SHMT2-221ENST00000555773 PRO1933Q9H354 126 aa7.84□□□□□ -1.15
SHMT2-221ENST00000555773 TSTD3H0UI37 97 aa7.83□□□□□ -1.16
SHMT2-221ENST00000555773 M0QXV9 152 aa7.83□□□□□ -1.16
SHMT2-221ENST00000555773 M0R378 163 aa7.83□□□□□ -1.16
SHMT2-221ENST00000555773 EIF4EBP3O60516 100 aaPredicted RBP7.83□□□□□ -1.16
SHMT2-221ENST00000555773 RYR1P21817 5038 aa7.83□□□□□ -1.16
SHMT2-221ENST00000555773 TRBV10-2A0A0K0K1G8 114 aa7.82□□□□□ -1.16
SHMT2-221ENST00000555773 MRPL55Q7Z7F7 128 aaKnown RBP7.82□□□□□ -1.16
SHMT2-221ENST00000555773 Q8NDZ9 215 aa7.82□□□□□ -1.16
SHMT2-221ENST00000555773 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
SHMT2-221ENST00000555773 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
SHMT2-221ENST00000555773 HAMPP81172 84 aa7.81□□□□□ -1.16
SHMT2-221ENST00000555773 PHF5AQ7RTV0 110 aaKnown RBP7.81□□□□□ -1.16
SHMT2-221ENST00000555773 C7orf33Q8WU49 177 aa7.81□□□□□ -1.16
SHMT2-221ENST00000555773 PRR3P79522 188 aaKnown RBP7.8□□□□□ -1.16
SHMT2-221ENST00000555773 LINC00167Q96N53 147 aa7.8□□□□□ -1.16
SHMT2-221ENST00000555773 HSD52Q0P140 79 aa7.79□□□□□ -1.16
SHMT2-221ENST00000555773 CEND1Q8N111 149 aa7.79□□□□□ -1.16
SHMT2-221ENST00000555773 A4D1N5 150 aa7.78□□□□□ -1.16
SHMT2-221ENST00000555773 UBE2BP63146 152 aa7.78□□□□□ -1.16
SHMT2-221ENST00000555773 IGLV1-50A0A075B6I6 118 aa7.77□□□□□ -1.17
SHMT2-221ENST00000555773 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
SHMT2-221ENST00000555773 GAGE10A6NGK3 116 aa7.77□□□□□ -1.17
SHMT2-221ENST00000555773 NCR3O14931 201 aa7.77□□□□□ -1.17
SHMT2-221ENST00000555773 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
SHMT2-221ENST00000555773 CBY1Q9Y3M2 126 aa7.77□□□□□ -1.17
SHMT2-221ENST00000555773 FAT1Q14517 4588 aa7.76□□□□□ -1.17
SHMT2-221ENST00000555773 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
SHMT2-221ENST00000555773 TMEM238LA0A1B0GVL6 79 aa7.76□□□□□ -1.17
SHMT2-221ENST00000555773 A6NJY4 79 aa7.76□□□□□ -1.17
SHMT2-221ENST00000555773 PCP4L1A6NKN8 68 aa7.76□□□□□ -1.17
SHMT2-221ENST00000555773 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
SHMT2-221ENST00000555773 DDTP30046 118 aa7.76□□□□□ -1.17
SHMT2-221ENST00000555773 S100A7L2Q5SY68 101 aa7.76□□□□□ -1.17
SHMT2-221ENST00000555773 TMEM126AQ9H061 195 aa7.76□□□□□ -1.17
SHMT2-221ENST00000555773 HSPG2P98160 4391 aa7.75□□□□□ -1.17
SHMT2-221ENST00000555773 RPL37AP8A6NKH3 93 aa7.75□□□□□ -1.17
SHMT2-221ENST00000555773 IGLV6-57P01721 117 aa7.75□□□□□ -1.17
SHMT2-221ENST00000555773 TRBV10-3A0A0K0K1G6 114 aa7.74□□□□□ -1.17
SHMT2-221ENST00000555773 FAM229AH3BQW9 127 aa7.74□□□□□ -1.17
SHMT2-221ENST00000555773 CTAG1AP78358 180 aa7.74□□□□□ -1.17
SHMT2-221ENST00000555773 LINC00528Q8N1L1 170 aa7.74□□□□□ -1.17
SHMT2-221ENST00000555773 OR13C6PQ8NH95 151 aa7.74□□□□□ -1.17
SHMT2-221ENST00000555773 KCNQ1DNQ9H478 68 aa7.74□□□□□ -1.17
SHMT2-221ENST00000555773 A6NDN8 102 aa7.73□□□□□ -1.17
SHMT2-221ENST00000555773 KRTAP11-1Q8IUC1 163 aa7.73□□□□□ -1.17
SHMT2-221ENST00000555773 LINC00337Q8N6G1 96 aa7.73□□□□□ -1.17
SHMT2-221ENST00000555773 M0R143 59 aa7.72□□□□□ -1.17
SHMT2-221ENST00000555773 CFC1BP0CG36 223 aa7.72□□□□□ -1.17
SHMT2-221ENST00000555773 CFC1P0CG37 223 aa7.72□□□□□ -1.17
SHMT2-221ENST00000555773 FXYD2P54710 66 aa7.72□□□□□ -1.17
SHMT2-221ENST00000555773 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
SHMT2-221ENST00000555773 A0A0B4J2C4 111 aa7.71□□□□□ -1.18
SHMT2-221ENST00000555773 PRYO14603 147 aa7.71□□□□□ -1.18
SHMT2-221ENST00000555773 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
SHMT2-221ENST00000555773 RPL37AP61513 92 aaKnown RBP7.71□□□□□ -1.18
SHMT2-221ENST00000555773 BVES-AS1Q5T3Y7 98 aa7.71□□□□□ -1.18
SHMT2-221ENST00000555773 REG3GQ6UW15 175 aa7.71□□□□□ -1.18
SHMT2-221ENST00000555773 Q8N1X5 172 aa7.71□□□□□ -1.18
SHMT2-221ENST00000555773 RAB37Q96AX2 223 aa7.7□□□□□ -1.18
SHMT2-221ENST00000555773 TRAV23DV6A0A075B6W5 121 aa7.69□□□□□ -1.18
SHMT2-221ENST00000555773 BCE1O60756 84 aa7.69□□□□□ -1.18
SHMT2-221ENST00000555773 SPRR1AP35321 89 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 313.5 ms