RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 OBSCN-AS1Q96MR7 158 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 TMEM243Q9BU79 118 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 IGSF10Q6WRI0 2623 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 C5orf47Q569G3 176 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 Q6JHZ5 121 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 SERP2Q8N6R1 65 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 TRGV2A0A075B6R0 118 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 A0A096LNT2 108 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 IGHV3OR16-9A0A0B4J2B5 98 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 GIG44P09565 113 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-207ENST00000554439 ENHOQ6UWT2 76 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 HRCT1Q6UXD1 115 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 TRBV10-1A0A0K0K1A3 114 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 PLAC8L1A1L4L8 177 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 H0YGX0 51 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 M0R2N4 97 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 CCKP06307 115 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 RPL35AP18077 110 aaKnown RBP1.76□□□□□ -2.13
PRPF39-207ENST00000554439 XCL1P47992 114 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 NANOS2P60321 138 aaKnown RBP1.76□□□□□ -2.13
PRPF39-207ENST00000554439 RPS28P62857 69 aaKnown RBP1.76□□□□□ -2.13
PRPF39-207ENST00000554439 C9orf116Q5BN46 136 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-207ENST00000554439 Q5XG85 94 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 Q8NDZ9 215 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 SPATA3Q8NHX4 192 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 MTORP42345 2549 aa1.76□□□□□ -2.13
PRPF39-207ENST00000554439 A0A096LPF7 62 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 TRGV4A0A0C4DH28 118 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 TRBV6-4A0A1B0GX49 114 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 IBA57-AS1B1ANH7 110 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 TMEM258P61165 79 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 C6orf226Q5I0X4 101 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 C20orf197Q8N268 126 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 C4orf3Q8WVX3 66 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 OVOL2Q9BRP0 275 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 ANK3Q12955 4377 aaKnown RBP1.75□□□□□ -2.13
PRPF39-207ENST00000554439 ACANP16112 2415 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 TRBV6-8A0A0A6YYG3 113 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 LINC00959A0A1B0GUT2 108 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 Q6ZVQ6 151 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 Q8N814 137 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 PIEZO1Q92508 2521 aa1.75□□□□□ -2.13
PRPF39-207ENST00000554439 VWFP04275 2813 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 ITPR3Q14573 2671 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 IGLV10-54A0A075B6I4 117 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 LY6G6DO95868 133 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 DEFB130BP0DP73 79 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 DEFB130AP0DP74 79 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 KRTAP1-5Q9BYS1 174 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 TRRAPQ9Y4A5 3859 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 TRAV10A0A0B4J240 114 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 C6orf99Q4VX62 202 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 SNURFQ9Y675 71 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 FLNAP21333 2647 aaKnown RBP1.74□□□□□ -2.13
PRPF39-207ENST00000554439 ZNF462Q96JM2 2506 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 DNAJC9-AS1A6NH13 148 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 TMEM256-PLSCR3K7ERE1 68 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 DSCR9P59020 149 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 SCXQ7RTU7 201 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 LINC00269Q8N2A0 174 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 LINC00167Q96N53 147 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 ESM1Q9NQ30 184 aa1.74□□□□□ -2.13
PRPF39-207ENST00000554439 H7BZZ5 65 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 PRB1P04280 392 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 HAMPP81172 84 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 LYPD5Q6UWN5 251 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 C6orf223Q8N319 242 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 TMEM86BQ8N661 226 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 CSNK1G2-AS1Q8NCQ2 148 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 WFDC11Q8NEX6 87 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 C16orf74Q96GX8 76 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 UBL5Q9BZL1 73 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 TRAV25A0A0B4J276 109 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 JMJD7-PLA2G4BH0Y9G9 81 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 J3QLI3 93 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 KIAA0087Q14695 138 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 Q6ZQT0 140 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 Q8IZM0 81 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 RMI2Q96E14 147 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 LAMTOR3Q9UHA4 124 aa1.73□□□□□ -2.13
PRPF39-207ENST00000554439 FAM236DA0A1B0GTK5 79 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 DEFB4AO15263 64 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 NDUFC2O95298 119 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 FAM236CP0DP71 79 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 LINC01547P58512 204 aaPredicted RBP1.72□□□□□ -2.13
PRPF39-207ENST00000554439 RBM3P98179 157 aaKnown RBP1.72□□□□□ -2.13
PRPF39-207ENST00000554439 LINC00575Q6W349 94 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 PKD1L1Q8TDX9 2849 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 F8WEM9 126 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 S100A7L2Q5SY68 101 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 ATP5EP2Q5VTU8 51 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 UNQ6190/PRO20217Q6UXQ8 127 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 Q6ZQY7 126 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 LINC00336Q6ZUF6 198 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 LINC01006Q8NI28 216 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 CHCHD10Q8WYQ3 142 aaPredicted RBP1.72□□□□□ -2.13
PRPF39-207ENST00000554439 PRAC1Q96KF2 57 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 LINC00474Q9P2X8 69 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 HIVEP2P31629 2446 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms