RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CHTF8P0CG12 524 aa4.81□□□□□ -1.64
ABCD4-220ENST00000553998 LGALS3P17931 250 aaKnown RBP4.81□□□□□ -1.64
ABCD4-220ENST00000553998 MAJINQ3KP22 176 aa4.81□□□□□ -1.64
ABCD4-220ENST00000553998 C9orf116Q5BN46 136 aaPredicted RBP4.81□□□□□ -1.64
ABCD4-220ENST00000553998 STPG4Q8N801 248 aa4.81□□□□□ -1.64
ABCD4-220ENST00000553998 DPH3Q96FX2 82 aa4.81□□□□□ -1.64
ABCD4-220ENST00000553998 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
ABCD4-220ENST00000553998 TMA7Q9Y2S6 64 aaKnown RBP4.81□□□□□ -1.64
ABCD4-220ENST00000553998 TSPEAR-AS2P59090 65 aa4.8□□□□□ -1.64
ABCD4-220ENST00000553998 GAGE2EQ4V326 116 aa4.8□□□□□ -1.64
ABCD4-220ENST00000553998 GAGE2DQ9UEU5 116 aa4.8□□□□□ -1.64
ABCD4-220ENST00000553998 HSBP1L1C9JCN9 74 aa4.79□□□□□ -1.64
ABCD4-220ENST00000553998 SCGB1D1O95968 90 aa4.79□□□□□ -1.64
ABCD4-220ENST00000553998 PRR3P79522 188 aaKnown RBP4.79□□□□□ -1.64
ABCD4-220ENST00000553998 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.64
ABCD4-220ENST00000553998 SPINK6Q6UWN8 80 aa4.79□□□□□ -1.64
ABCD4-220ENST00000553998 C7orf33Q8WU49 177 aa4.79□□□□□ -1.64
ABCD4-220ENST00000553998 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
ABCD4-220ENST00000553998 PFN2P35080 140 aa4.78□□□□□ -1.64
ABCD4-220ENST00000553998 LINC00158P58513 81 aa4.78□□□□□ -1.64
ABCD4-220ENST00000553998 JOSD1Q15040 202 aaPredicted RBP4.78□□□□□ -1.64
ABCD4-220ENST00000553998 MEIG1Q5JSS6 88 aa4.78□□□□□ -1.64
ABCD4-220ENST00000553998 C9orf129Q5T035 196 aaKnown RBP4.78□□□□□ -1.64
ABCD4-220ENST00000553998 REG3GQ6UW15 175 aa4.78□□□□□ -1.64
ABCD4-220ENST00000553998 ATOH7Q8N100 152 aa4.78□□□□□ -1.64
ABCD4-220ENST00000553998 IGKV2D-26A0A0A0MRZ7 120 aa4.77□□□□□ -1.65
ABCD4-220ENST00000553998 A0A1W2PNN7 141 aa4.77□□□□□ -1.65
ABCD4-220ENST00000553998 ZNF815PA8K554 130 aa4.77□□□□□ -1.65
ABCD4-220ENST00000553998 ANKRD39Q53RE8 183 aa4.77□□□□□ -1.65
ABCD4-220ENST00000553998 SND1-IT1Q9HBX3 110 aa4.77□□□□□ -1.65
ABCD4-220ENST00000553998 XAGE1AQ9HD64 81 aa4.77□□□□□ -1.65
ABCD4-220ENST00000553998 A0A0J9YXY3 114 aa4.76□□□□□ -1.65
ABCD4-220ENST00000553998 TIMM17BO60830 172 aa4.76□□□□□ -1.65
ABCD4-220ENST00000553998 SMIM13P0DJ93 91 aa4.76□□□□□ -1.65
ABCD4-220ENST00000553998 IGLV5-37A0A075B6J1 123 aa4.75□□□□□ -1.65
ABCD4-220ENST00000553998 LOC107984156A0A0G2JMH3 177 aa4.75□□□□□ -1.65
ABCD4-220ENST00000553998 RPL24P83731 157 aaKnown RBP4.75□□□□□ -1.65
ABCD4-220ENST00000553998 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
ABCD4-220ENST00000553998 FAM19A5Q7Z5A7 132 aaPredicted RBP4.75□□□□□ -1.65
ABCD4-220ENST00000553998 ARL17AQ8IVW1 177 aa4.75□□□□□ -1.65
ABCD4-220ENST00000553998 MIR7-3HGQ8N6C7 128 aa4.75□□□□□ -1.65
ABCD4-220ENST00000553998 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
ABCD4-220ENST00000553998 A0A0U1RRA0 63 aa4.74□□□□□ -1.65
ABCD4-220ENST00000553998 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
ABCD4-220ENST00000553998 M0QXV9 152 aa4.74□□□□□ -1.65
ABCD4-220ENST00000553998 LBHQ53QV2 105 aaPredicted RBP4.74□□□□□ -1.65
ABCD4-220ENST00000553998 PYY3Q5JQD4 70 aa4.74□□□□□ -1.65
ABCD4-220ENST00000553998 KRTAP7-1Q8IUC3 87 aa4.74□□□□□ -1.65
ABCD4-220ENST00000553998 TTTY13Q9BZ97 58 aa4.74□□□□□ -1.65
ABCD4-220ENST00000553998 C22orf24Q9Y442 160 aa4.74□□□□□ -1.65
ABCD4-220ENST00000553998 TMEM238C9JI98 176 aa4.73□□□□□ -1.65
ABCD4-220ENST00000553998 VPREB1P12018 145 aa4.73□□□□□ -1.65
ABCD4-220ENST00000553998 SCGB1D4Q6XE38 83 aa4.73□□□□□ -1.65
ABCD4-220ENST00000553998 Q6ZVH6 145 aa4.73□□□□□ -1.65
ABCD4-220ENST00000553998 PCP2Q8IVA1 136 aa4.73□□□□□ -1.65
ABCD4-220ENST00000553998 LITAFQ99732 161 aa4.73□□□□□ -1.65
ABCD4-220ENST00000553998 MIEN1Q9BRT3 115 aa4.73□□□□□ -1.65
ABCD4-220ENST00000553998 VAMP8Q9BV40 100 aa4.73□□□□□ -1.65
ABCD4-220ENST00000553998 A0A0U1RQV1 116 aa4.72□□□□□ -1.65
ABCD4-220ENST00000553998 DLEU1O43261 78 aa4.72□□□□□ -1.65
ABCD4-220ENST00000553998 COX8AP10176 69 aa4.72□□□□□ -1.65
ABCD4-220ENST00000553998 ADAMTSL4-AS1Q5T5F5 129 aa4.72□□□□□ -1.65
ABCD4-220ENST00000553998 PHF5AQ7RTV0 110 aaKnown RBP4.72□□□□□ -1.65
ABCD4-220ENST00000553998 MRPL55Q7Z7F7 128 aaKnown RBP4.72□□□□□ -1.65
ABCD4-220ENST00000553998 BOD1L2Q8IYS8 172 aa4.72□□□□□ -1.65
ABCD4-220ENST00000553998 NKAPP1Q8N9T2 125 aa4.72□□□□□ -1.65
ABCD4-220ENST00000553998 COPS9Q8WXC6 57 aa4.72□□□□□ -1.65
ABCD4-220ENST00000553998 PPDPFQ9H3Y8 114 aa4.72□□□□□ -1.65
ABCD4-220ENST00000553998 NDUFC2O95298 119 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 IFITM1P13164 125 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 UBE2BP63146 152 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 SPATA45Q537H7 98 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 DAND5Q8N907 189 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 SPANXDQ9BXN6 97 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 SPANXCQ9NY87 97 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 PAM16Q9Y3D7 125 aa4.71□□□□□ -1.66
ABCD4-220ENST00000553998 TRBV10-2A0A0K0K1G8 114 aa4.7□□□□□ -1.66
ABCD4-220ENST00000553998 M0R378 163 aa4.7□□□□□ -1.66
ABCD4-220ENST00000553998 SPANXB1Q9NS25 103 aaPredicted RBP4.7□□□□□ -1.66
ABCD4-220ENST00000553998 S100A12P80511 92 aa4.69□□□□□ -1.66
ABCD4-220ENST00000553998 SLC25A34Q6PIV7 304 aa4.69□□□□□ -1.66
ABCD4-220ENST00000553998 SOSTDC1Q6X4U4 206 aa4.69□□□□□ -1.66
ABCD4-220ENST00000553998 Q8NDZ9 215 aa4.69□□□□□ -1.66
ABCD4-220ENST00000553998 LINC00167Q96N53 147 aa4.69□□□□□ -1.66
ABCD4-220ENST00000553998 PSORS1C2Q9UIG4 136 aa4.69□□□□□ -1.66
ABCD4-220ENST00000553998 IGLV1-50A0A075B6I6 118 aa4.68□□□□□ -1.66
ABCD4-220ENST00000553998 C14orf144Q96I85 54 aa4.68□□□□□ -1.66
ABCD4-220ENST00000553998 MUC17Q685J3 4493 aa4.68□□□□□ -1.66
ABCD4-220ENST00000553998 GAGE10A6NGK3 116 aa4.67□□□□□ -1.66
ABCD4-220ENST00000553998 EIF4EBP3O60516 100 aaPredicted RBP4.67□□□□□ -1.66
ABCD4-220ENST00000553998 SMIM6P0DI80 62 aa4.67□□□□□ -1.66
ABCD4-220ENST00000553998 NPC2P61916 151 aa4.67□□□□□ -1.66
ABCD4-220ENST00000553998 C1orf137Q5JT78 98 aa4.67□□□□□ -1.66
ABCD4-220ENST00000553998 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
ABCD4-220ENST00000553998 LINC00518Q8N0U6 118 aa4.67□□□□□ -1.66
ABCD4-220ENST00000553998 HIGD1BQ9P298 99 aa4.67□□□□□ -1.66
ABCD4-220ENST00000553998 RPL37AP8A6NKH3 93 aa4.66□□□□□ -1.66
ABCD4-220ENST00000553998 NCR3O14931 201 aa4.66□□□□□ -1.66
ABCD4-220ENST00000553998 MUSTN1Q8IVN3 82 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms