RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 Q6ZVH6 145 aa7.76□□□□□ -1.17
ERBB3-216ENST00000550869 TMEM238C9JI98 176 aa7.75□□□□□ -1.17
ERBB3-216ENST00000550869 PFN2P35080 140 aa7.75□□□□□ -1.17
ERBB3-216ENST00000550869 LINC00158P58513 81 aa7.75□□□□□ -1.17
ERBB3-216ENST00000550869 SDIM1Q6ZPB5 146 aa7.75□□□□□ -1.17
ERBB3-216ENST00000550869 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
ERBB3-216ENST00000550869 TAL2Q16559 108 aa7.74□□□□□ -1.17
ERBB3-216ENST00000550869 Q6ZRP5 223 aa7.74□□□□□ -1.17
ERBB3-216ENST00000550869 MIR7-3HGQ8N6C7 128 aa7.74□□□□□ -1.17
ERBB3-216ENST00000550869 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
ERBB3-216ENST00000550869 LOC107984640A0A0U1RRK4 108 aa7.73□□□□□ -1.17
ERBB3-216ENST00000550869 IFITM1P13164 125 aa7.73□□□□□ -1.17
ERBB3-216ENST00000550869 HNRNPA3P51991 378 aaKnown RBP7.73□□□□□ -1.17
ERBB3-216ENST00000550869 SOSTDC1Q6X4U4 206 aa7.73□□□□□ -1.17
ERBB3-216ENST00000550869 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
ERBB3-216ENST00000550869 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
ERBB3-216ENST00000550869 DDTP30046 118 aa7.72□□□□□ -1.17
ERBB3-216ENST00000550869 DAND5Q8N907 189 aa7.72□□□□□ -1.17
ERBB3-216ENST00000550869 SND1-IT1Q9HBX3 110 aa7.72□□□□□ -1.17
ERBB3-216ENST00000550869 SRSF9Q13242 221 aaKnown RBP eCLIP7.71□□□□□ -1.18
ERBB3-216ENST00000550869 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
ERBB3-216ENST00000550869 PKIGQ9Y2B9 76 aa7.71□□□□□ -1.18
ERBB3-216ENST00000550869 HSD52Q0P140 79 aa7.7□□□□□ -1.18
ERBB3-216ENST00000550869 C9orf129Q5T035 196 aaKnown RBP7.7□□□□□ -1.18
ERBB3-216ENST00000550869 MUSTN1Q8IVN3 82 aa7.7□□□□□ -1.18
ERBB3-216ENST00000550869 FLG2Q5D862 2391 aaPredicted RBP7.7□□□□□ -1.18
ERBB3-216ENST00000550869 A0A096LNI7 61 aa7.69□□□□□ -1.18
ERBB3-216ENST00000550869 CTAG1AP78358 180 aa7.69□□□□□ -1.18
ERBB3-216ENST00000550869 LINC01620Q4KN68 170 aa7.69□□□□□ -1.18
ERBB3-216ENST00000550869 CEND1Q8N111 149 aa7.69□□□□□ -1.18
ERBB3-216ENST00000550869 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
ERBB3-216ENST00000550869 PLA2G2DQ9UNK4 145 aa7.69□□□□□ -1.18
ERBB3-216ENST00000550869 DNAH8Q96JB1 4490 aa7.69□□□□□ -1.18
ERBB3-216ENST00000550869 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
ERBB3-216ENST00000550869 GAGE2BQ13066 116 aa7.68□□□□□ -1.18
ERBB3-216ENST00000550869 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
ERBB3-216ENST00000550869 COPS9Q8WXC6 57 aa7.68□□□□□ -1.18
ERBB3-216ENST00000550869 XAGE1AQ9HD64 81 aa7.68□□□□□ -1.18
ERBB3-216ENST00000550869 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
ERBB3-216ENST00000550869 NDUFC2O95298 119 aa7.67□□□□□ -1.18
ERBB3-216ENST00000550869 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
ERBB3-216ENST00000550869 KRTAP7-1Q8IUC3 87 aa7.67□□□□□ -1.18
ERBB3-216ENST00000550869 Q8NDZ9 215 aa7.67□□□□□ -1.18
ERBB3-216ENST00000550869 PANO1I0J062 215 aa7.66□□□□□ -1.18
ERBB3-216ENST00000550869 HAMPP81172 84 aa7.66□□□□□ -1.18
ERBB3-216ENST00000550869 RPL24P83731 157 aaKnown RBP7.66□□□□□ -1.18
ERBB3-216ENST00000550869 BVES-AS1Q5T3Y7 98 aa7.66□□□□□ -1.18
ERBB3-216ENST00000550869 Q6ZSA8 131 aa7.66□□□□□ -1.18
ERBB3-216ENST00000550869 LINC00474Q9P2X8 69 aa7.66□□□□□ -1.18
ERBB3-216ENST00000550869 IGLV5-37A0A075B6J1 123 aa7.65□□□□□ -1.18
ERBB3-216ENST00000550869 A4D1N5 150 aa7.65□□□□□ -1.18
ERBB3-216ENST00000550869 J3QL48 77 aa7.65□□□□□ -1.18
ERBB3-216ENST00000550869 CHTF8P0CG12 524 aa7.65□□□□□ -1.18
ERBB3-216ENST00000550869 VPREB1P12018 145 aa7.65□□□□□ -1.18
ERBB3-216ENST00000550869 FXYD2P54710 66 aa7.65□□□□□ -1.18
ERBB3-216ENST00000550869 NPC2P61916 151 aa7.65□□□□□ -1.18
ERBB3-216ENST00000550869 SPACA4Q8TDM5 124 aa7.65□□□□□ -1.18
ERBB3-216ENST00000550869 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.65□□□□□ -1.18
ERBB3-216ENST00000550869 A0A1W2PNN7 141 aa7.64□□□□□ -1.19
ERBB3-216ENST00000550869 FAM30AQ9NZY2 134 aa7.64□□□□□ -1.19
ERBB3-216ENST00000550869 IGKV2-28A0A075B6P5 120 aa7.63□□□□□ -1.19
ERBB3-216ENST00000550869 IGKV2-24A0A0C4DH68 120 aa7.63□□□□□ -1.19
ERBB3-216ENST00000550869 A0A1B0GWB2 263 aa7.63□□□□□ -1.19
ERBB3-216ENST00000550869 IGKV2D-28P01615 120 aa7.63□□□□□ -1.19
ERBB3-216ENST00000550869 SERTAD4-AS1Q5TG53 156 aa7.63□□□□□ -1.19
ERBB3-216ENST00000550869 TRBV10-2A0A0K0K1G8 114 aa7.62□□□□□ -1.19
ERBB3-216ENST00000550869 FAM168BA1KXE4 195 aa7.62□□□□□ -1.19
ERBB3-216ENST00000550869 PCP4L1A6NKN8 68 aa7.62□□□□□ -1.19
ERBB3-216ENST00000550869 KRTAP29-1A8MX34 341 aaPredicted RBP7.62□□□□□ -1.19
ERBB3-216ENST00000550869 M0R143 59 aa7.62□□□□□ -1.19
ERBB3-216ENST00000550869 CFC1BP0CG36 223 aa7.62□□□□□ -1.19
ERBB3-216ENST00000550869 CFC1P0CG37 223 aa7.62□□□□□ -1.19
ERBB3-216ENST00000550869 LINC00528Q8N1L1 170 aa7.62□□□□□ -1.19
ERBB3-216ENST00000550869 TMEM238LA0A1B0GVL6 79 aa7.61□□□□□ -1.19
ERBB3-216ENST00000550869 A6NJY4 79 aa7.61□□□□□ -1.19
ERBB3-216ENST00000550869 HINT1P49773 126 aaPredicted RBP7.61□□□□□ -1.19
ERBB3-216ENST00000550869 PRR3P79522 188 aaKnown RBP7.61□□□□□ -1.19
ERBB3-216ENST00000550869 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
ERBB3-216ENST00000550869 A0A087WYN8 130 aa7.6□□□□□ -1.19
ERBB3-216ENST00000550869 A0A0B4J2C4 111 aa7.6□□□□□ -1.19
ERBB3-216ENST00000550869 C22orf24Q9Y442 160 aa7.6□□□□□ -1.19
ERBB3-216ENST00000550869 LINC00337Q8N6G1 96 aa7.59□□□□□ -1.19
ERBB3-216ENST00000550869 SNHG12Q9BXW3 62 aa7.59□□□□□ -1.19
ERBB3-216ENST00000550869 M0R378 163 aa7.58□□□□□ -1.2
ERBB3-216ENST00000550869 TRAV13-2A0A0B4J235 113 aa7.57□□□□□ -1.2
ERBB3-216ENST00000550869 IGLV6-57P01721 117 aa7.57□□□□□ -1.2
ERBB3-216ENST00000550869 SCXQ7RTU7 201 aa7.57□□□□□ -1.2
ERBB3-216ENST00000550869 NHP2Q9NX24 153 aaKnown RBP7.57□□□□□ -1.2
ERBB3-216ENST00000550869 NCR3O14931 201 aa7.56□□□□□ -1.2
ERBB3-216ENST00000550869 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
ERBB3-216ENST00000550869 MRPL55Q7Z7F7 128 aaKnown RBP7.56□□□□□ -1.2
ERBB3-216ENST00000550869 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
ERBB3-216ENST00000550869 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
ERBB3-216ENST00000550869 A6NDN8 102 aa7.55□□□□□ -1.2
ERBB3-216ENST00000550869 M0QXV9 152 aa7.55□□□□□ -1.2
ERBB3-216ENST00000550869 NKAPP1Q8N9T2 125 aa7.55□□□□□ -1.2
ERBB3-216ENST00000550869 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
ERBB3-216ENST00000550869 TMEM126AQ9H061 195 aa7.55□□□□□ -1.2
ERBB3-216ENST00000550869 PRO1854Q9UHT4 67 aa7.55□□□□□ -1.2
ERBB3-216ENST00000550869 LRP1Q07954 4544 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms