RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 MUSTN1Q8IVN3 82 aa18.45■□□□□ 0.54
BRF1-213ENST00000548421 LOC107984156A0A0G2JMH3 177 aa18.43■□□□□ 0.54
BRF1-213ENST00000548421 ARL17AQ8IVW1 177 aa18.43■□□□□ 0.54
BRF1-213ENST00000548421 PPDPFQ9H3Y8 114 aa18.43■□□□□ 0.54
BRF1-213ENST00000548421 EIF4EBP3O60516 100 aaPredicted RBP18.42■□□□□ 0.54
BRF1-213ENST00000548421 PCP4L1A6NKN8 68 aa18.41■□□□□ 0.54
BRF1-213ENST00000548421 C9orf129Q5T035 196 aaKnown RBP18.41■□□□□ 0.54
BRF1-213ENST00000548421 CEND1Q8N111 149 aa18.41■□□□□ 0.54
BRF1-213ENST00000548421 IGKV2-24A0A0C4DH68 120 aa18.4■□□□□ 0.54
BRF1-213ENST00000548421 RPL24P83731 157 aaKnown RBP18.39■□□□□ 0.53
BRF1-213ENST00000548421 LINC00474Q9P2X8 69 aa18.39■□□□□ 0.53
BRF1-213ENST00000548421 CHTF8P0CG12 524 aa18.37■□□□□ 0.53
BRF1-213ENST00000548421 PKHD1P08F94 4074 aa18.37■□□□□ 0.53
BRF1-213ENST00000548421 A4D1N5 150 aa18.33■□□□□ 0.52
BRF1-213ENST00000548421 M0R143 59 aa18.33■□□□□ 0.52
BRF1-213ENST00000548421 FXYD2P54710 66 aa18.33■□□□□ 0.52
BRF1-213ENST00000548421 NDUFC2O95298 119 aa18.32■□□□□ 0.52
BRF1-213ENST00000548421 HINT1P49773 126 aaPredicted RBP18.32■□□□□ 0.52
BRF1-213ENST00000548421 PLA2G2DQ9UNK4 145 aa18.32■□□□□ 0.52
BRF1-213ENST00000548421 TMEM238LA0A1B0GVL6 79 aa18.31■□□□□ 0.52
BRF1-213ENST00000548421 A6NJY4 79 aa18.31■□□□□ 0.52
BRF1-213ENST00000548421 BVES-AS1Q5T3Y7 98 aa18.31■□□□□ 0.52
BRF1-213ENST00000548421 Q8NDZ9 215 aa18.31■□□□□ 0.52
BRF1-213ENST00000548421 SPACA4Q8TDM5 124 aa18.31■□□□□ 0.52
BRF1-213ENST00000548421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.31■□□□□ 0.52
BRF1-213ENST00000548421 PANO1I0J062 215 aa18.3■□□□□ 0.52
BRF1-213ENST00000548421 FAM168BA1KXE4 195 aa18.29■□□□□ 0.52
BRF1-213ENST00000548421 KRTAP10-1P60331 282 aa18.29■□□□□ 0.52
BRF1-213ENST00000548421 VPREB1P12018 145 aa18.28■□□□□ 0.52
BRF1-213ENST00000548421 DNAH8Q96JB1 4490 aa18.28■□□□□ 0.52
BRF1-213ENST00000548421 SERTAD4-AS1Q5TG53 156 aa18.27■□□□□ 0.52
BRF1-213ENST00000548421 DPH3Q96FX2 82 aa18.26■□□□□ 0.51
BRF1-213ENST00000548421 FAM19A5Q7Z5A7 132 aaPredicted RBP18.25■□□□□ 0.51
BRF1-213ENST00000548421 A0A1W2PNN7 141 aa18.24■□□□□ 0.51
BRF1-213ENST00000548421 PRR3P79522 188 aaKnown RBP18.24■□□□□ 0.51
BRF1-213ENST00000548421 IGLV5-37A0A075B6J1 123 aa18.23■□□□□ 0.51
BRF1-213ENST00000548421 IGKV2-28A0A075B6P5 120 aa18.23■□□□□ 0.51
BRF1-213ENST00000548421 IGKV2D-28P01615 120 aa18.23■□□□□ 0.51
BRF1-213ENST00000548421 KRTAP7-1Q8IUC3 87 aa18.23■□□□□ 0.51
BRF1-213ENST00000548421 NCR3O14931 201 aa18.22■□□□□ 0.51
BRF1-213ENST00000548421 NKAPP1Q8N9T2 125 aa18.22■□□□□ 0.51
BRF1-213ENST00000548421 TRBV10-2A0A0K0K1G8 114 aa18.2■□□□□ 0.5
BRF1-213ENST00000548421 CFC1BP0CG36 223 aa18.2■□□□□ 0.5
BRF1-213ENST00000548421 CFC1P0CG37 223 aa18.2■□□□□ 0.5
BRF1-213ENST00000548421 BATFQ16520 125 aa18.2■□□□□ 0.5
BRF1-213ENST00000548421 Q6ZSA8 131 aa18.2■□□□□ 0.5
BRF1-213ENST00000548421 NHP2Q9NX24 153 aaKnown RBP18.2■□□□□ 0.5
BRF1-213ENST00000548421 EPPK1P58107 5090 aaKnown RBP18.2■□□□□ 0.5
BRF1-213ENST00000548421 LRP1BQ9NZR2 4599 aa18.2■□□□□ 0.5
BRF1-213ENST00000548421 FAM30AQ9NZY2 134 aa18.2■□□□□ 0.5
BRF1-213ENST00000548421 DYNC1H1Q14204 4646 aaKnown RBP18.19■□□□□ 0.5
BRF1-213ENST00000548421 A0A087WYN8 130 aa18.19■□□□□ 0.5
BRF1-213ENST00000548421 A0A0B4J2C4 111 aa18.18■□□□□ 0.5
BRF1-213ENST00000548421 C22orf24Q9Y442 160 aa18.18■□□□□ 0.5
BRF1-213ENST00000548421 M0R378 163 aa18.17■□□□□ 0.5
BRF1-213ENST00000548421 LINC00337Q8N6G1 96 aa18.17■□□□□ 0.5
BRF1-213ENST00000548421 A6NDN8 102 aa18.16■□□□□ 0.5
BRF1-213ENST00000548421 M0QXV9 152 aa18.16■□□□□ 0.5
BRF1-213ENST00000548421 RAB37Q96AX2 223 aa18.16■□□□□ 0.5
BRF1-213ENST00000548421 TRAV13-2A0A0B4J235 113 aa18.15■□□□□ 0.5
BRF1-213ENST00000548421 A0A1B0GWB2 263 aa18.15■□□□□ 0.5
BRF1-213ENST00000548421 EPM2AB3EWF7 344 aa18.15■□□□□ 0.5
BRF1-213ENST00000548421 PLAC8Q9NZF1 115 aa18.15■□□□□ 0.5
BRF1-213ENST00000548421 MRPL55Q7Z7F7 128 aaKnown RBP18.14■□□□□ 0.5
BRF1-213ENST00000548421 SNHG12Q9BXW3 62 aa18.14■□□□□ 0.5
BRF1-213ENST00000548421 K7ERJ3 54 aa18.13■□□□□ 0.49
BRF1-213ENST00000548421 C7orf33Q8WU49 177 aa18.13■□□□□ 0.49
BRF1-213ENST00000548421 S100A7L2Q5SY68 101 aa18.12■□□□□ 0.49
BRF1-213ENST00000548421 OR13C6PQ8NH95 151 aa18.12■□□□□ 0.49
BRF1-213ENST00000548421 LBHQ53QV2 105 aaPredicted RBP18.1■□□□□ 0.49
BRF1-213ENST00000548421 PRO1854Q9UHT4 67 aa18.1■□□□□ 0.49
BRF1-213ENST00000548421 GAGE10A6NGK3 116 aa18.09■□□□□ 0.49
BRF1-213ENST00000548421 TMEM126AQ9H061 195 aa18.09■□□□□ 0.49
BRF1-213ENST00000548421 IGLV6-57P01721 117 aa18.08■□□□□ 0.49
BRF1-213ENST00000548421 SCXQ7RTU7 201 aa18.08■□□□□ 0.49
BRF1-213ENST00000548421 CIRBP-AS1Q8TBR5 109 aa18.08■□□□□ 0.49
BRF1-213ENST00000548421 LINC00167Q96N53 147 aa18.08■□□□□ 0.49
BRF1-213ENST00000548421 TRBV10-3A0A0K0K1G6 114 aa18.07■□□□□ 0.48
BRF1-213ENST00000548421 RPL13AP40429 203 aaKnown RBP18.07■□□□□ 0.48
BRF1-213ENST00000548421 PHF5AQ7RTV0 110 aaKnown RBP18.07■□□□□ 0.48
BRF1-213ENST00000548421 BIRC6Q9NR09 4857 aa18.04■□□□□ 0.48
BRF1-213ENST00000548421 IGLV1-50A0A075B6I6 118 aa18.02■□□□□ 0.48
BRF1-213ENST00000548421 RPL37AP8A6NKH3 93 aa18.02■□□□□ 0.48
BRF1-213ENST00000548421 H7C2G1 150 aa18.01■□□□□ 0.47
BRF1-213ENST00000548421 UBE2BP63146 152 aa18.01■□□□□ 0.47
BRF1-213ENST00000548421 HAMPP81172 84 aa18.01■□□□□ 0.47
BRF1-213ENST00000548421 CBY1Q9Y3M2 126 aa18■□□□□ 0.47
BRF1-213ENST00000548421 APOBP04114 4563 aaKnown RBP17.98■□□□□ 0.47
BRF1-213ENST00000548421 TRAV23DV6A0A075B6W5 121 aa17.98■□□□□ 0.47
BRF1-213ENST00000548421 Q1RN00 199 aa17.98■□□□□ 0.47
BRF1-213ENST00000548421 COL5A1-AS1Q5SY13 56 aa17.98■□□□□ 0.47
BRF1-213ENST00000548421 KCNQ1DNQ9H478 68 aa17.96■□□□□ 0.47
BRF1-213ENST00000548421 TSPAN13O95857 204 aa17.95■□□□□ 0.46
BRF1-213ENST00000548421 SMIM11BQ8TCY0 68 aa17.95■□□□□ 0.46
BRF1-213ENST00000548421 PRYO14603 147 aa17.95■□□□□ 0.46
BRF1-213ENST00000548421 XGP55808 180 aa17.93■□□□□ 0.46
BRF1-213ENST00000548421 KRTAP11-1Q8IUC1 163 aa17.92■□□□□ 0.46
BRF1-213ENST00000548421 TAX1BP3O14907 124 aa17.91■□□□□ 0.46
BRF1-213ENST00000548421 RPL28P46779 137 aaKnown RBP17.91■□□□□ 0.46
BRF1-213ENST00000548421 ZNF73O43830 326 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms