RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 LBHQ53QV2 105 aaPredicted RBP11.28□□□□□ -0.6
HDAC7-227ENST00000548080 COL5A1-AS1Q5SY13 56 aa11.28□□□□□ -0.6
HDAC7-227ENST00000548080 C14orf177Q52M58 125 aa11.27□□□□□ -0.6
HDAC7-227ENST00000548080 PPDPFQ9H3Y8 114 aa11.27□□□□□ -0.6
HDAC7-227ENST00000548080 A4D1N5 150 aa11.26□□□□□ -0.61
HDAC7-227ENST00000548080 SOSTDC1Q6X4U4 206 aa11.26□□□□□ -0.61
HDAC7-227ENST00000548080 NHP2Q9NX24 153 aaKnown RBP11.26□□□□□ -0.61
HDAC7-227ENST00000548080 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-227ENST00000548080 SLPIP03973 132 aa11.25□□□□□ -0.61
HDAC7-227ENST00000548080 RNF151Q2KHN1 245 aa11.25□□□□□ -0.61
HDAC7-227ENST00000548080 CARD19Q96LW7 228 aa11.25□□□□□ -0.61
HDAC7-227ENST00000548080 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-227ENST00000548080 HAMPP81172 84 aa11.24□□□□□ -0.61
HDAC7-227ENST00000548080 A0A1B0GWB2 263 aa11.23□□□□□ -0.61
HDAC7-227ENST00000548080 APOBP04114 4563 aaKnown RBP11.22□□□□□ -0.61
HDAC7-227ENST00000548080 RYR1P21817 5038 aa11.22□□□□□ -0.61
HDAC7-227ENST00000548080 SND1-IT1Q9HBX3 110 aa11.22□□□□□ -0.61
HDAC7-227ENST00000548080 LOC107984156A0A0G2JMH3 177 aa11.21□□□□□ -0.61
HDAC7-227ENST00000548080 K7ERJ3 54 aa11.21□□□□□ -0.61
HDAC7-227ENST00000548080 CFC1BP0CG36 223 aa11.21□□□□□ -0.61
HDAC7-227ENST00000548080 CFC1P0CG37 223 aa11.21□□□□□ -0.61
HDAC7-227ENST00000548080 ARL17AQ8IVW1 177 aa11.21□□□□□ -0.61
HDAC7-227ENST00000548080 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
HDAC7-227ENST00000548080 CNBPP62633 177 aaKnown RBP11.2□□□□□ -0.62
HDAC7-227ENST00000548080 FAM30AQ9NZY2 134 aa11.19□□□□□ -0.62
HDAC7-227ENST00000548080 HERC2O95714 4834 aa11.19□□□□□ -0.62
HDAC7-227ENST00000548080 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
HDAC7-227ENST00000548080 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
HDAC7-227ENST00000548080 RAB37Q96AX2 223 aa11.19□□□□□ -0.62
HDAC7-227ENST00000548080 TLX1NBP0CAT3 122 aa11.18□□□□□ -0.62
HDAC7-227ENST00000548080 HSPG2P98160 4391 aa11.17□□□□□ -0.62
HDAC7-227ENST00000548080 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
HDAC7-227ENST00000548080 KRTAP17-1Q9BYP8 105 aa11.17□□□□□ -0.62
HDAC7-227ENST00000548080 PRO1854Q9UHT4 67 aa11.17□□□□□ -0.62
HDAC7-227ENST00000548080 DNAH8Q96JB1 4490 aa11.15□□□□□ -0.62
HDAC7-227ENST00000548080 XGP55808 180 aa11.15□□□□□ -0.62
HDAC7-227ENST00000548080 GAGE2EQ4V326 116 aa11.15□□□□□ -0.62
HDAC7-227ENST00000548080 Q6ZRP5 223 aa11.15□□□□□ -0.62
HDAC7-227ENST00000548080 XAGE1AQ9HD64 81 aa11.15□□□□□ -0.62
HDAC7-227ENST00000548080 GAGE2DQ9UEU5 116 aa11.15□□□□□ -0.62
HDAC7-227ENST00000548080 NDUFC2O95298 119 aa11.14□□□□□ -0.63
HDAC7-227ENST00000548080 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
HDAC7-227ENST00000548080 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
HDAC7-227ENST00000548080 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
HDAC7-227ENST00000548080 C9orf118A6NHY6 69 aa11.12□□□□□ -0.63
HDAC7-227ENST00000548080 IGKV2-28A0A075B6P5 120 aa11.12□□□□□ -0.63
HDAC7-227ENST00000548080 IGKV2D-28P01615 120 aa11.12□□□□□ -0.63
HDAC7-227ENST00000548080 TRAV13-2A0A0B4J235 113 aa11.11□□□□□ -0.63
HDAC7-227ENST00000548080 TSPAN13O95857 204 aa11.1□□□□□ -0.63
HDAC7-227ENST00000548080 GAGE2BQ13066 116 aa11.1□□□□□ -0.63
HDAC7-227ENST00000548080 Q8NDZ9 215 aa11.1□□□□□ -0.63
HDAC7-227ENST00000548080 H3BUT2 72 aa11.09□□□□□ -0.63
HDAC7-227ENST00000548080 PANO1I0J062 215 aa11.09□□□□□ -0.63
HDAC7-227ENST00000548080 SMR3BP02814 79 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-227ENST00000548080 RPL13AP40429 203 aaKnown RBP11.09□□□□□ -0.63
HDAC7-227ENST00000548080 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
HDAC7-227ENST00000548080 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
HDAC7-227ENST00000548080 Q6ZSA8 131 aa11.09□□□□□ -0.63
HDAC7-227ENST00000548080 LINC00337Q8N6G1 96 aa11.09□□□□□ -0.63
HDAC7-227ENST00000548080 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
HDAC7-227ENST00000548080 H7C2G1 150 aa11.08□□□□□ -0.64
HDAC7-227ENST00000548080 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
HDAC7-227ENST00000548080 A0A1B0GV90 55 aa11.07□□□□□ -0.64
HDAC7-227ENST00000548080 SDIM1Q6ZPB5 146 aa11.07□□□□□ -0.64
HDAC7-227ENST00000548080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.07□□□□□ -0.64
HDAC7-227ENST00000548080 CHTF8P0CG12 524 aa11.06□□□□□ -0.64
HDAC7-227ENST00000548080 Q1RN00 199 aa11.06□□□□□ -0.64
HDAC7-227ENST00000548080 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
HDAC7-227ENST00000548080 VPREB1P12018 145 aa11.06□□□□□ -0.64
HDAC7-227ENST00000548080 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
HDAC7-227ENST00000548080 KRTAP4-5Q9BYR2 181 aa11.06□□□□□ -0.64
HDAC7-227ENST00000548080 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
HDAC7-227ENST00000548080 NCR3O14931 201 aa11.05□□□□□ -0.64
HDAC7-227ENST00000548080 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
HDAC7-227ENST00000548080 A0A096LNI7 61 aa11.04□□□□□ -0.64
HDAC7-227ENST00000548080 A0A1W2PPM0 123 aa11.04□□□□□ -0.64
HDAC7-227ENST00000548080 IGKV2-24A0A0C4DH68 120 aa11.03□□□□□ -0.64
HDAC7-227ENST00000548080 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
HDAC7-227ENST00000548080 PSMB2P49721 201 aa11.02□□□□□ -0.65
HDAC7-227ENST00000548080 M0R378 163 aa11.01□□□□□ -0.65
HDAC7-227ENST00000548080 FABP2P12104 132 aa11.01□□□□□ -0.65
HDAC7-227ENST00000548080 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
HDAC7-227ENST00000548080 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
HDAC7-227ENST00000548080 Q8N1X5 172 aa11.01□□□□□ -0.65
HDAC7-227ENST00000548080 TMEM126AQ9H061 195 aa11.01□□□□□ -0.65
HDAC7-227ENST00000548080 IGLV5-37A0A075B6J1 123 aa11□□□□□ -0.65
HDAC7-227ENST00000548080 VAMP3Q15836 100 aa11□□□□□ -0.65
HDAC7-227ENST00000548080 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
HDAC7-227ENST00000548080 DPH3Q96FX2 82 aa11□□□□□ -0.65
HDAC7-227ENST00000548080 FAM168BA1KXE4 195 aa10.99□□□□□ -0.65
HDAC7-227ENST00000548080 TRIAP1O43715 76 aa10.99□□□□□ -0.65
HDAC7-227ENST00000548080 IGLV6-57P01721 117 aa10.99□□□□□ -0.65
HDAC7-227ENST00000548080 SCGB1C2P0DMR2 95 aa10.99□□□□□ -0.65
HDAC7-227ENST00000548080 FAT1Q14517 4588 aa10.98□□□□□ -0.65
HDAC7-227ENST00000548080 RPL28P46779 137 aaKnown RBP10.98□□□□□ -0.65
HDAC7-227ENST00000548080 LYRM7Q5U5X0 104 aa10.98□□□□□ -0.65
HDAC7-227ENST00000548080 SMIM11BQ8TCY0 68 aa10.98□□□□□ -0.65
HDAC7-227ENST00000548080 SPACA4Q8TDM5 124 aa10.98□□□□□ -0.65
HDAC7-227ENST00000548080 LINC00474Q9P2X8 69 aa10.98□□□□□ -0.65
HDAC7-227ENST00000548080 TRBV10-3A0A0K0K1G6 114 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms