RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 NHLRC4P0CG21 123 aaPredicted RBP8.43□□□□□ -1.06
NPC1L1-204ENST00000546276 LINC00474Q9P2X8 69 aa8.43□□□□□ -1.06
NPC1L1-204ENST00000546276 HCG22E2RYF7 251 aa8.42□□□□□ -1.06
NPC1L1-204ENST00000546276 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
NPC1L1-204ENST00000546276 C6orf48Q9UBA6 75 aa8.42□□□□□ -1.06
NPC1L1-204ENST00000546276 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
NPC1L1-204ENST00000546276 BRCA2P51587 3418 aa8.42□□□□□ -1.06
NPC1L1-204ENST00000546276 PSPHP1O15172 72 aa8.41□□□□□ -1.06
NPC1L1-204ENST00000546276 Q9BRP9 147 aa8.41□□□□□ -1.06
NPC1L1-204ENST00000546276 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
NPC1L1-204ENST00000546276 C4orf26Q17RF5 130 aa8.41□□□□□ -1.06
NPC1L1-204ENST00000546276 PMAIP1Q13794 54 aa8.4□□□□□ -1.07
NPC1L1-204ENST00000546276 ELOF1P60002 83 aaKnown RBP8.4□□□□□ -1.07
NPC1L1-204ENST00000546276 HTTP42858 3142 aa8.39□□□□□ -1.07
NPC1L1-204ENST00000546276 SMIM29Q86T20 159 aa8.39□□□□□ -1.07
NPC1L1-204ENST00000546276 H0Y9P7 68 aa8.39□□□□□ -1.07
NPC1L1-204ENST00000546276 DEFB116Q30KQ4 102 aa8.39□□□□□ -1.07
NPC1L1-204ENST00000546276 MTORP42345 2549 aa8.39□□□□□ -1.07
NPC1L1-204ENST00000546276 C7orf33Q8WU49 177 aa8.38□□□□□ -1.07
NPC1L1-204ENST00000546276 X6R8D5 127 aa8.38□□□□□ -1.07
NPC1L1-204ENST00000546276 hDV103S1A0JD37 113 aa8.37□□□□□ -1.07
NPC1L1-204ENST00000546276 POLQO75417 2590 aa8.37□□□□□ -1.07
NPC1L1-204ENST00000546276 C22orf24Q9Y442 160 aa8.36□□□□□ -1.07
NPC1L1-204ENST00000546276 A0A1B0GW54 56 aa8.35□□□□□ -1.07
NPC1L1-204ENST00000546276 M0R2N4 97 aa8.35□□□□□ -1.07
NPC1L1-204ENST00000546276 PCOTHQ58A44 107 aa8.34□□□□□ -1.07
NPC1L1-204ENST00000546276 FSHBP01225 129 aa8.34□□□□□ -1.07
NPC1L1-204ENST00000546276 PRLHP81277 87 aa8.34□□□□□ -1.07
NPC1L1-204ENST00000546276 LINC01556Q5JQF7 62 aa8.34□□□□□ -1.07
NPC1L1-204ENST00000546276 TM2D3Q9BRN9 247 aa8.34□□□□□ -1.07
NPC1L1-204ENST00000546276 IGHV6-1A0A0B4J1U7 121 aa8.33□□□□□ -1.08
NPC1L1-204ENST00000546276 CHD7Q9P2D1 2997 aa8.33□□□□□ -1.08
NPC1L1-204ENST00000546276 ZNF575Q86XF7 245 aa8.32□□□□□ -1.08
NPC1L1-204ENST00000546276 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
NPC1L1-204ENST00000546276 ANKRD17O75179 2603 aaKnown RBP8.31□□□□□ -1.08
NPC1L1-204ENST00000546276 IGLV6-57P01721 117 aa8.31□□□□□ -1.08
NPC1L1-204ENST00000546276 GVQW2A0A096LPI5 108 aaPredicted RBP8.31□□□□□ -1.08
NPC1L1-204ENST00000546276 Q8NBF4 154 aa8.3□□□□□ -1.08
NPC1L1-204ENST00000546276 C1orf64Q8NEQ6 169 aa8.3□□□□□ -1.08
NPC1L1-204ENST00000546276 H3BNG1 76 aa8.29□□□□□ -1.08
NPC1L1-204ENST00000546276 RANBP2P49792 3224 aaKnown RBP8.29□□□□□ -1.08
NPC1L1-204ENST00000546276 C5orf42Q9H799 3197 aa8.29□□□□□ -1.08
NPC1L1-204ENST00000546276 FLNBO75369 2602 aaKnown RBP8.28□□□□□ -1.08
NPC1L1-204ENST00000546276 K7ERS5 55 aa8.28□□□□□ -1.08
NPC1L1-204ENST00000546276 Q6ZRX8 168 aa8.28□□□□□ -1.08
NPC1L1-204ENST00000546276 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
NPC1L1-204ENST00000546276 CHD9Q3L8U1 2897 aa8.27□□□□□ -1.09
NPC1L1-204ENST00000546276 LAMA3Q16787 3333 aa8.26□□□□□ -1.09
NPC1L1-204ENST00000546276 VPREB1P12018 145 aa8.26□□□□□ -1.09
NPC1L1-204ENST00000546276 CSNK1G2-AS1Q8NCQ2 148 aa8.26□□□□□ -1.09
NPC1L1-204ENST00000546276 Q8NAQ8 132 aa8.25□□□□□ -1.09
NPC1L1-204ENST00000546276 CIRBP-AS1Q8TBR5 109 aa8.25□□□□□ -1.09
NPC1L1-204ENST00000546276 LAMA2P24043 3122 aaKnown RBP8.25□□□□□ -1.09
NPC1L1-204ENST00000546276 ERC2-IT1O76042 136 aa8.24□□□□□ -1.09
NPC1L1-204ENST00000546276 LINC01600Q96MT4 127 aa8.24□□□□□ -1.09
NPC1L1-204ENST00000546276 LINC00476Q8WZB0 136 aa8.24□□□□□ -1.09
NPC1L1-204ENST00000546276 ACANP16112 2415 aa8.24□□□□□ -1.09
NPC1L1-204ENST00000546276 NUPR2A6NF83 97 aa8.23□□□□□ -1.09
NPC1L1-204ENST00000546276 ST20-AS1Q8NBB2 130 aa8.22□□□□□ -1.09
NPC1L1-204ENST00000546276 KLKP1Q107X0 134 aa8.22□□□□□ -1.09
NPC1L1-204ENST00000546276 H3BPC8 53 aa8.21□□□□□ -1.1
NPC1L1-204ENST00000546276 Q6ZRP5 223 aa8.21□□□□□ -1.1
NPC1L1-204ENST00000546276 MKI67P46013 3256 aaKnown RBP8.21□□□□□ -1.1
NPC1L1-204ENST00000546276 C9orf129Q5T035 196 aaKnown RBP8.2□□□□□ -1.1
NPC1L1-204ENST00000546276 GIG44P09565 113 aaPredicted RBP8.2□□□□□ -1.1
NPC1L1-204ENST00000546276 TP53AIP1Q9HCN2 124 aa8.2□□□□□ -1.1
NPC1L1-204ENST00000546276 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
NPC1L1-204ENST00000546276 TRBV7-4A0A0J9YYF1 115 aa8.18□□□□□ -1.1
NPC1L1-204ENST00000546276 LY6G6CO95867 125 aa8.17□□□□□ -1.1
NPC1L1-204ENST00000546276 IGLV5-52A0A0A0MRZ9 124 aa8.17□□□□□ -1.1
NPC1L1-204ENST00000546276 A0A096LNT2 108 aa8.16□□□□□ -1.1
NPC1L1-204ENST00000546276 H7BZZ5 65 aa8.16□□□□□ -1.1
NPC1L1-204ENST00000546276 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
NPC1L1-204ENST00000546276 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
NPC1L1-204ENST00000546276 PRR34Q9NV39 138 aa8.16□□□□□ -1.1
NPC1L1-204ENST00000546276 C19orf73Q9NVV2 129 aa8.15□□□□□ -1.1
NPC1L1-204ENST00000546276 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.1
NPC1L1-204ENST00000546276 TRANK1O15050 2925 aa8.15□□□□□ -1.11
NPC1L1-204ENST00000546276 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.11
NPC1L1-204ENST00000546276 K7EQZ3 153 aa8.15□□□□□ -1.11
NPC1L1-204ENST00000546276 SERTAD4-AS1Q5TG53 156 aa8.14□□□□□ -1.11
NPC1L1-204ENST00000546276 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
NPC1L1-204ENST00000546276 CFAP54Q96N23 3096 aa8.13□□□□□ -1.11
NPC1L1-204ENST00000546276 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
NPC1L1-204ENST00000546276 HECTD1Q9ULT8 2610 aa8.12□□□□□ -1.11
NPC1L1-204ENST00000546276 EPM2AB3EWF7 344 aa8.12□□□□□ -1.11
NPC1L1-204ENST00000546276 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
NPC1L1-204ENST00000546276 FAM104AQ969W3 186 aa8.12□□□□□ -1.11
NPC1L1-204ENST00000546276 XIRP2A4UGR9 3374 aa8.12□□□□□ -1.11
NPC1L1-204ENST00000546276 PHF5AQ7RTV0 110 aaKnown RBP8.12□□□□□ -1.11
NPC1L1-204ENST00000546276 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
NPC1L1-204ENST00000546276 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
NPC1L1-204ENST00000546276 FAM168BA1KXE4 195 aa8.11□□□□□ -1.11
NPC1L1-204ENST00000546276 DNAH10OSP0CZ25 163 aa8.11□□□□□ -1.11
NPC1L1-204ENST00000546276 SPAG11AQ6PDA7 123 aa8.11□□□□□ -1.11
NPC1L1-204ENST00000546276 MOBPQ13875 183 aa8.1□□□□□ -1.11
NPC1L1-204ENST00000546276 F8P00451 2351 aa8.1□□□□□ -1.11
NPC1L1-204ENST00000546276 DNAH14Q0VDD8 3507 aa8.09□□□□□ -1.11
NPC1L1-204ENST00000546276 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.11
NPC1L1-204ENST00000546276 Q8N377 158 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms