RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 MIR7-3HGQ8N6C7 128 aa7.39□□□□□ -1.23
SNHG1-221ENST00000544983 IGLV5-37A0A075B6J1 123 aa7.38□□□□□ -1.23
SNHG1-221ENST00000544983 FAM19A5Q7Z5A7 132 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-221ENST00000544983 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
SNHG1-221ENST00000544983 MIEN1Q9BRT3 115 aa7.38□□□□□ -1.23
SNHG1-221ENST00000544983 DNAH8Q96JB1 4490 aa7.38□□□□□ -1.23
SNHG1-221ENST00000544983 A0A0U1RRA0 63 aa7.37□□□□□ -1.23
SNHG1-221ENST00000544983 FAM168BA1KXE4 195 aa7.37□□□□□ -1.23
SNHG1-221ENST00000544983 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
SNHG1-221ENST00000544983 M0QXV9 152 aa7.37□□□□□ -1.23
SNHG1-221ENST00000544983 SMR3BP02814 79 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-221ENST00000544983 PLA2G1BP04054 148 aaKnown RBP7.37□□□□□ -1.23
SNHG1-221ENST00000544983 Q6ZVH6 145 aa7.37□□□□□ -1.23
SNHG1-221ENST00000544983 LINC00528Q8N1L1 170 aa7.37□□□□□ -1.23
SNHG1-221ENST00000544983 NKAPP1Q8N9T2 125 aa7.37□□□□□ -1.23
SNHG1-221ENST00000544983 VAMP8Q9BV40 100 aa7.37□□□□□ -1.23
SNHG1-221ENST00000544983 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
SNHG1-221ENST00000544983 PYY3Q5JQD4 70 aa7.36□□□□□ -1.23
SNHG1-221ENST00000544983 PCP2Q8IVA1 136 aa7.36□□□□□ -1.23
SNHG1-221ENST00000544983 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
SNHG1-221ENST00000544983 C22orf24Q9Y442 160 aa7.36□□□□□ -1.23
SNHG1-221ENST00000544983 DLEU1O43261 78 aa7.35□□□□□ -1.23
SNHG1-221ENST00000544983 SERTAD4-AS1Q5TG53 156 aa7.35□□□□□ -1.23
SNHG1-221ENST00000544983 MRPL55Q7Z7F7 128 aaKnown RBP7.35□□□□□ -1.23
SNHG1-221ENST00000544983 LITAFQ99732 161 aa7.35□□□□□ -1.23
SNHG1-221ENST00000544983 PPDPFQ9H3Y8 114 aa7.35□□□□□ -1.23
SNHG1-221ENST00000544983 NDUFC2O95298 119 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 COX8AP10176 69 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 VPREB1P12018 145 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 IFITM1P13164 125 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 SPATA45Q537H7 98 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 Q5VSD8 79 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 BOD1L2Q8IYS8 172 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 SPANXDQ9BXN6 97 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 SPANXCQ9NY87 97 aa7.34□□□□□ -1.23
SNHG1-221ENST00000544983 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
SNHG1-221ENST00000544983 UBE2BP63146 152 aa7.33□□□□□ -1.24
SNHG1-221ENST00000544983 S100A12P80511 92 aa7.33□□□□□ -1.24
SNHG1-221ENST00000544983 PHF5AQ7RTV0 110 aaKnown RBP7.33□□□□□ -1.24
SNHG1-221ENST00000544983 DAND5Q8N907 189 aa7.33□□□□□ -1.24
SNHG1-221ENST00000544983 PAM16Q9Y3D7 125 aa7.33□□□□□ -1.24
SNHG1-221ENST00000544983 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
SNHG1-221ENST00000544983 M0R378 163 aa7.32□□□□□ -1.24
SNHG1-221ENST00000544983 LINC00308Q8TCZ7 52 aa7.32□□□□□ -1.24
SNHG1-221ENST00000544983 SRRM2Q9UQ35 2752 aaKnown RBP7.32□□□□□ -1.24
SNHG1-221ENST00000544983 HSPG2P98160 4391 aa7.32□□□□□ -1.24
SNHG1-221ENST00000544983 SLC25A34Q6PIV7 304 aa7.31□□□□□ -1.24
SNHG1-221ENST00000544983 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
SNHG1-221ENST00000544983 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-221ENST00000544983 SMIM6P0DI80 62 aa7.29□□□□□ -1.24
SNHG1-221ENST00000544983 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
SNHG1-221ENST00000544983 SRSF9Q13242 221 aaKnown RBP eCLIP7.29□□□□□ -1.24
SNHG1-221ENST00000544983 LINC00518Q8N0U6 118 aa7.29□□□□□ -1.24
SNHG1-221ENST00000544983 PSORS1C2Q9UIG4 136 aa7.29□□□□□ -1.24
SNHG1-221ENST00000544983 CBY1Q9Y3M2 126 aa7.29□□□□□ -1.24
SNHG1-221ENST00000544983 IGLV1-50A0A075B6I6 118 aa7.28□□□□□ -1.24
SNHG1-221ENST00000544983 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
SNHG1-221ENST00000544983 C14orf144Q96I85 54 aa7.28□□□□□ -1.24
SNHG1-221ENST00000544983 HIGD1BQ9P298 99 aa7.28□□□□□ -1.24
SNHG1-221ENST00000544983 GAGE10A6NGK3 116 aa7.27□□□□□ -1.25
SNHG1-221ENST00000544983 KRTAP10-4P60372 401 aaPredicted RBP7.27□□□□□ -1.25
SNHG1-221ENST00000544983 Q8NDZ9 215 aa7.27□□□□□ -1.25
SNHG1-221ENST00000544983 RPL37AP8A6NKH3 93 aa7.26□□□□□ -1.25
SNHG1-221ENST00000544983 NPC2P61916 151 aa7.26□□□□□ -1.25
SNHG1-221ENST00000544983 C1orf137Q5JT78 98 aa7.26□□□□□ -1.25
SNHG1-221ENST00000544983 NCR3O14931 201 aa7.25□□□□□ -1.25
SNHG1-221ENST00000544983 EIF4EBP3O60516 100 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-221ENST00000544983 S100A7L2Q5SY68 101 aa7.25□□□□□ -1.25
SNHG1-221ENST00000544983 MUSTN1Q8IVN3 82 aa7.25□□□□□ -1.25
SNHG1-221ENST00000544983 HIST1H4GQ99525 98 aa7.25□□□□□ -1.25
SNHG1-221ENST00000544983 VPS13BQ7Z7G8 4022 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 IGKV2-28A0A075B6P5 120 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 LOC105371267A0A1B0GV96 52 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 PRYO14603 147 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 BCE1O60756 84 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 IGKV2D-28P01615 120 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 IGLV6-57P01721 117 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 DDTP30046 118 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 REG3GQ6UW15 175 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 KRTAP11-1Q8IUC1 163 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 TMEM126AQ9H061 195 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 KCNQ1DNQ9H478 68 aa7.24□□□□□ -1.25
SNHG1-221ENST00000544983 TRBV10-3A0A0K0K1G6 114 aa7.23□□□□□ -1.25
SNHG1-221ENST00000544983 IGLV7-43P04211 117 aa7.23□□□□□ -1.25
SNHG1-221ENST00000544983 TAL2Q16559 108 aa7.23□□□□□ -1.25
SNHG1-221ENST00000544983 SPINK6Q6UWN8 80 aa7.23□□□□□ -1.25
SNHG1-221ENST00000544983 UQCR10Q9UDW1 63 aa7.23□□□□□ -1.25
SNHG1-221ENST00000544983 DMBT1Q9UGM3 2413 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-221ENST00000544983 FAT1Q14517 4588 aa7.22□□□□□ -1.25
SNHG1-221ENST00000544983 TRAV13-2A0A0B4J235 113 aa7.22□□□□□ -1.25
SNHG1-221ENST00000544983 RPL28P46779 137 aaKnown RBP7.22□□□□□ -1.25
SNHG1-221ENST00000544983 INAFM2P0DMQ5 153 aa7.21□□□□□ -1.26
SNHG1-221ENST00000544983 C2orf91Q6ZV80 131 aa7.21□□□□□ -1.26
SNHG1-221ENST00000544983 H0Y9J4 135 aa7.2□□□□□ -1.26
SNHG1-221ENST00000544983 ZNF861PO60384 105 aa7.2□□□□□ -1.26
SNHG1-221ENST00000544983 SPRR1AP35321 89 aa7.2□□□□□ -1.26
SNHG1-221ENST00000544983 LINC00337Q8N6G1 96 aa7.2□□□□□ -1.26
SNHG1-221ENST00000544983 OR13C6PQ8NH95 151 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms