RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 HERVK_113P63121 156 aa6.07□□□□□ -1.44
TNFRSF1A-214ENST00000543048 GEMIN7Q9H840 131 aaKnown RBP6.07□□□□□ -1.44
TNFRSF1A-214ENST00000543048 C6orf48Q9UBA6 75 aa6.07□□□□□ -1.44
TNFRSF1A-214ENST00000543048 IGLV5-45A0A087WSX0 123 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 TRBV30A0A0K0K1B3 111 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 PRSS2P07478 247 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 ZNF22P17026 224 aaPredicted RBP6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 HERVK_113P61574 105 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 TMEM170BQ5T4T1 132 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 Q6ZRP5 223 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 LINC00469Q8N7U9 141 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 PAM16Q9Y3D7 125 aa6.06□□□□□ -1.44
TNFRSF1A-214ENST00000543048 H3BRM9 83 aa6.05□□□□□ -1.44
TNFRSF1A-214ENST00000543048 SPATA45Q537H7 98 aa6.05□□□□□ -1.44
TNFRSF1A-214ENST00000543048 C2orf82Q6UX34 121 aa6.05□□□□□ -1.44
TNFRSF1A-214ENST00000543048 TOMM7Q9P0U1 55 aa6.05□□□□□ -1.44
TNFRSF1A-214ENST00000543048 CDKN2A-AS1Q9UH64 79 aa6.05□□□□□ -1.44
TNFRSF1A-214ENST00000543048 CKS1BP61024 79 aa6.04□□□□□ -1.44
TNFRSF1A-214ENST00000543048 GAGE2EQ4V326 116 aa6.04□□□□□ -1.44
TNFRSF1A-214ENST00000543048 Q8IZM0 81 aa6.04□□□□□ -1.44
TNFRSF1A-214ENST00000543048 GAGE2DQ9UEU5 116 aa6.04□□□□□ -1.44
TNFRSF1A-214ENST00000543048 TMEM223A0PJW6 202 aa6.03□□□□□ -1.44
TNFRSF1A-214ENST00000543048 E9PLD3 99 aa6.03□□□□□ -1.44
TNFRSF1A-214ENST00000543048 SRSF9Q13242 221 aaKnown RBP eCLIP6.03□□□□□ -1.44
TNFRSF1A-214ENST00000543048 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
TNFRSF1A-214ENST00000543048 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
TNFRSF1A-214ENST00000543048 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
TNFRSF1A-214ENST00000543048 NDUFC2-KCTD14E9PQ53 114 aa6.02□□□□□ -1.45
TNFRSF1A-214ENST00000543048 NMUP48645 174 aa6.02□□□□□ -1.45
TNFRSF1A-214ENST00000543048 PHF5AQ7RTV0 110 aaKnown RBP6.02□□□□□ -1.45
TNFRSF1A-214ENST00000543048 IGKV2D-26A0A0A0MRZ7 120 aa6.01□□□□□ -1.45
TNFRSF1A-214ENST00000543048 FAM168BA1KXE4 195 aa6.01□□□□□ -1.45
TNFRSF1A-214ENST00000543048 SMIM1B2RUZ4 78 aa6.01□□□□□ -1.45
TNFRSF1A-214ENST00000543048 TSTD3H0UI37 97 aa6.01□□□□□ -1.45
TNFRSF1A-214ENST00000543048 SPINK8P0C7L1 97 aa6.01□□□□□ -1.45
TNFRSF1A-214ENST00000543048 PLEKHB2Q96CS7 222 aa6.01□□□□□ -1.45
TNFRSF1A-214ENST00000543048 PSORS1C2Q9UIG4 136 aa6.01□□□□□ -1.45
TNFRSF1A-214ENST00000543048 IGLV5-39A0A0G2JS06 123 aa6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 LEPROTO15243 131 aa6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 MT1HL1P0DM35 61 aa6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 COX8AP10176 69 aa6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 REG3GQ6UW15 175 aa6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 FAM19A5Q7Z5A7 132 aaPredicted RBP6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 COX7B2Q8TF08 81 aa6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 LINC01600Q96MT4 127 aa6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 TNXBP22105 4242 aa6□□□□□ -1.45
TNFRSF1A-214ENST00000543048 J3QQQ9 107 aa5.99□□□□□ -1.45
TNFRSF1A-214ENST00000543048 LGALS3P17931 250 aaKnown RBP5.99□□□□□ -1.45
TNFRSF1A-214ENST00000543048 CXCL5P42830 114 aa5.99□□□□□ -1.45
TNFRSF1A-214ENST00000543048 C1orf137Q5JT78 98 aa5.99□□□□□ -1.45
TNFRSF1A-214ENST00000543048 C9orf129Q5T035 196 aaKnown RBP5.99□□□□□ -1.45
TNFRSF1A-214ENST00000543048 PRO1933Q9H354 126 aa5.99□□□□□ -1.45
TNFRSF1A-214ENST00000543048 UQCR10Q9UDW1 63 aa5.99□□□□□ -1.45
TNFRSF1A-214ENST00000543048 TSPEAR-AS2P59090 65 aa5.98□□□□□ -1.45
TNFRSF1A-214ENST00000543048 SLC25A34Q6PIV7 304 aa5.98□□□□□ -1.45
TNFRSF1A-214ENST00000543048 KRTAP7-1Q8IUC3 87 aa5.98□□□□□ -1.45
TNFRSF1A-214ENST00000543048 PCP2Q8IVA1 136 aa5.98□□□□□ -1.45
TNFRSF1A-214ENST00000543048 C14orf144Q96I85 54 aa5.98□□□□□ -1.45
TNFRSF1A-214ENST00000543048 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
TNFRSF1A-214ENST00000543048 ZNF815PA8K554 130 aa5.97□□□□□ -1.45
TNFRSF1A-214ENST00000543048 DLEU1O43261 78 aa5.97□□□□□ -1.45
TNFRSF1A-214ENST00000543048 BOD1L2Q8IYS8 172 aa5.97□□□□□ -1.45
TNFRSF1A-214ENST00000543048 MIEN1Q9BRT3 115 aa5.97□□□□□ -1.45
TNFRSF1A-214ENST00000543048 TTTY13Q9BZ97 58 aa5.97□□□□□ -1.45
TNFRSF1A-214ENST00000543048 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
TNFRSF1A-214ENST00000543048 M0QXV9 152 aa5.96□□□□□ -1.46
TNFRSF1A-214ENST00000543048 IGLV7-43P04211 117 aa5.96□□□□□ -1.46
TNFRSF1A-214ENST00000543048 UBE2BP63146 152 aa5.96□□□□□ -1.46
TNFRSF1A-214ENST00000543048 KRTAP11-1Q8IUC1 163 aa5.96□□□□□ -1.46
TNFRSF1A-214ENST00000543048 TP73-AS1Q9UF72 201 aa5.96□□□□□ -1.46
TNFRSF1A-214ENST00000543048 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
TNFRSF1A-214ENST00000543048 LBHQ53QV2 105 aaPredicted RBP5.95□□□□□ -1.46
TNFRSF1A-214ENST00000543048 SFTA2Q6UW10 78 aa5.95□□□□□ -1.46
TNFRSF1A-214ENST00000543048 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
TNFRSF1A-214ENST00000543048 XAGE1AQ9HD64 81 aa5.95□□□□□ -1.46
TNFRSF1A-214ENST00000543048 NDUFA12Q9UI09 145 aa5.95□□□□□ -1.46
TNFRSF1A-214ENST00000543048 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
TNFRSF1A-214ENST00000543048 DDTP30046 118 aa5.94□□□□□ -1.46
TNFRSF1A-214ENST00000543048 DIRC1Q969H9 104 aa5.94□□□□□ -1.46
TNFRSF1A-214ENST00000543048 ZNF625Q96I27 306 aaPredicted RBP5.94□□□□□ -1.46
TNFRSF1A-214ENST00000543048 HERV-K104P63124 156 aa5.93□□□□□ -1.46
TNFRSF1A-214ENST00000543048 SCGB1D4Q6XE38 83 aa5.93□□□□□ -1.46
TNFRSF1A-214ENST00000543048 C2orf91Q6ZV80 131 aa5.93□□□□□ -1.46
TNFRSF1A-214ENST00000543048 PCP4L1A6NKN8 68 aa5.92□□□□□ -1.46
TNFRSF1A-214ENST00000543048 HIGD1BQ9P298 99 aa5.92□□□□□ -1.46
TNFRSF1A-214ENST00000543048 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
TNFRSF1A-214ENST00000543048 A0A0J9YXY3 114 aa5.91□□□□□ -1.46
TNFRSF1A-214ENST00000543048 MRPL55Q7Z7F7 128 aaKnown RBP5.91□□□□□ -1.46
TNFRSF1A-214ENST00000543048 TMEM238C9JI98 176 aa5.9□□□□□ -1.46
TNFRSF1A-214ENST00000543048 H0Y9J4 135 aa5.9□□□□□ -1.46
TNFRSF1A-214ENST00000543048 TIMM17BO60830 172 aa5.9□□□□□ -1.46
TNFRSF1A-214ENST00000543048 PFN2P35080 140 aa5.9□□□□□ -1.46
TNFRSF1A-214ENST00000543048 COX17Q14061 63 aa5.9□□□□□ -1.46
TNFRSF1A-214ENST00000543048 LINC00167Q96N53 147 aa5.9□□□□□ -1.46
TNFRSF1A-214ENST00000543048 LINC00587B1AMM8 73 aa5.89□□□□□ -1.47
TNFRSF1A-214ENST00000543048 HSD52Q0P140 79 aa5.89□□□□□ -1.47
TNFRSF1A-214ENST00000543048 MEIG1Q5JSS6 88 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms