RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 SACSQ9NZJ4 4579 aa8.23□□□□□ -1.09
SMAD3-204ENST00000540846 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
SMAD3-204ENST00000540846 COX6CP09669 75 aa8.22□□□□□ -1.09
SMAD3-204ENST00000540846 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
SMAD3-204ENST00000540846 C6orf48Q9UBA6 75 aa8.22□□□□□ -1.09
SMAD3-204ENST00000540846 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
SMAD3-204ENST00000540846 KMT2CQ8NEZ4 4911 aaKnown RBP8.22□□□□□ -1.09
SMAD3-204ENST00000540846 NDUFC2O95298 119 aa8.22□□□□□ -1.09
SMAD3-204ENST00000540846 Q6ZRN7 208 aaPredicted RBP8.22□□□□□ -1.09
SMAD3-204ENST00000540846 RMI2Q96E14 147 aa8.22□□□□□ -1.09
SMAD3-204ENST00000540846 M0R2N4 97 aa8.21□□□□□ -1.1
SMAD3-204ENST00000540846 ATXN8Q156A1 80 aa8.21□□□□□ -1.1
SMAD3-204ENST00000540846 CAMK2N2Q96S95 79 aa8.21□□□□□ -1.1
SMAD3-204ENST00000540846 DNAH10Q8IVF4 4471 aa8.2□□□□□ -1.1
SMAD3-204ENST00000540846 K7ERU9 68 aa8.2□□□□□ -1.1
SMAD3-204ENST00000540846 WFDC2Q14508 124 aa8.19□□□□□ -1.1
SMAD3-204ENST00000540846 RPL28P46779 137 aaKnown RBP8.18□□□□□ -1.1
SMAD3-204ENST00000540846 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-204ENST00000540846 Q6ZRU5 148 aa8.18□□□□□ -1.1
SMAD3-204ENST00000540846 MTURNQ8N3F0 131 aa8.18□□□□□ -1.1
SMAD3-204ENST00000540846 DNAH2Q9P225 4427 aa8.18□□□□□ -1.1
SMAD3-204ENST00000540846 LST1O00453 97 aa8.18□□□□□ -1.1
SMAD3-204ENST00000540846 LINC01620Q4KN68 170 aa8.17□□□□□ -1.1
SMAD3-204ENST00000540846 Q8NDZ9 215 aa8.17□□□□□ -1.1
SMAD3-204ENST00000540846 CLEC2BQ92478 149 aa8.17□□□□□ -1.1
SMAD3-204ENST00000540846 M0QXV9 152 aa8.16□□□□□ -1.1
SMAD3-204ENST00000540846 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
SMAD3-204ENST00000540846 SMIM11BQ8TCY0 68 aa8.16□□□□□ -1.1
SMAD3-204ENST00000540846 RYR2Q92736 4967 aa8.16□□□□□ -1.1
SMAD3-204ENST00000540846 C9JAW5 83 aa8.15□□□□□ -1.1
SMAD3-204ENST00000540846 USP17L23D6RBM5 183 aa8.15□□□□□ -1.1
SMAD3-204ENST00000540846 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
SMAD3-204ENST00000540846 FRAS1Q86XX4 4008 aa8.14□□□□□ -1.11
SMAD3-204ENST00000540846 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
SMAD3-204ENST00000540846 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
SMAD3-204ENST00000540846 LINC01600Q96MT4 127 aa8.14□□□□□ -1.11
SMAD3-204ENST00000540846 SLC25A20O43772 301 aa8.14□□□□□ -1.11
SMAD3-204ENST00000540846 PRR3P79522 188 aaKnown RBP8.14□□□□□ -1.11
SMAD3-204ENST00000540846 RNF151Q2KHN1 245 aa8.14□□□□□ -1.11
SMAD3-204ENST00000540846 ETDBQ3ZM63 59 aa8.14□□□□□ -1.11
SMAD3-204ENST00000540846 TRBV10-2A0A0K0K1G8 114 aa8.13□□□□□ -1.11
SMAD3-204ENST00000540846 LRCOL1A6NCL2 159 aa8.13□□□□□ -1.11
SMAD3-204ENST00000540846 RTL8CO15255 209 aa8.13□□□□□ -1.11
SMAD3-204ENST00000540846 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
SMAD3-204ENST00000540846 CARD19Q96LW7 228 aa8.13□□□□□ -1.11
SMAD3-204ENST00000540846 NCR3O14931 201 aa8.12□□□□□ -1.11
SMAD3-204ENST00000540846 PCP4P48539 62 aa8.12□□□□□ -1.11
SMAD3-204ENST00000540846 TMEM126AQ9H061 195 aa8.12□□□□□ -1.11
SMAD3-204ENST00000540846 XAGE1AQ9HD64 81 aa8.12□□□□□ -1.11
SMAD3-204ENST00000540846 TRACP01848 142 aa8.11□□□□□ -1.11
SMAD3-204ENST00000540846 TLX1NBP0CAT3 122 aa8.11□□□□□ -1.11
SMAD3-204ENST00000540846 VPS25Q9BRG1 176 aa8.11□□□□□ -1.11
SMAD3-204ENST00000540846 H0YGX0 51 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 H3BT86 120 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 SLPIP03973 132 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 TEN1Q86WV5 123 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 ANKRD29Q8N6D5 301 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 FAM218AQ96MZ4 157 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 DNAH17Q9UFH2 4485 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 LECT2O14960 151 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 VPREB1P12018 145 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 Q6ZRP5 223 aa8.1□□□□□ -1.11
SMAD3-204ENST00000540846 J3QR89 54 aa8.09□□□□□ -1.11
SMAD3-204ENST00000540846 PSCAO43653 123 aa8.09□□□□□ -1.11
SMAD3-204ENST00000540846 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
SMAD3-204ENST00000540846 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
SMAD3-204ENST00000540846 A0A087WTM6 91 aa8.07□□□□□ -1.12
SMAD3-204ENST00000540846 GAGE2EQ4V326 116 aa8.07□□□□□ -1.12
SMAD3-204ENST00000540846 GAGE2DQ9UEU5 116 aa8.07□□□□□ -1.12
SMAD3-204ENST00000540846 FAT2Q9NYQ8 4349 aa8.07□□□□□ -1.12
SMAD3-204ENST00000540846 TNP2Q05952 138 aa8.06□□□□□ -1.12
SMAD3-204ENST00000540846 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
SMAD3-204ENST00000540846 PPDPFLQ8WWR9 84 aa8.06□□□□□ -1.12
SMAD3-204ENST00000540846 RYR3Q15413 4870 aa8.06□□□□□ -1.12
SMAD3-204ENST00000540846 A0A087WYN8 130 aa8.05□□□□□ -1.12
SMAD3-204ENST00000540846 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
SMAD3-204ENST00000540846 M0R378 163 aa8.05□□□□□ -1.12
SMAD3-204ENST00000540846 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
SMAD3-204ENST00000540846 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
SMAD3-204ENST00000540846 C6orf99Q4VX62 202 aa8.04□□□□□ -1.12
SMAD3-204ENST00000540846 C14orf177Q52M58 125 aa8.04□□□□□ -1.12
SMAD3-204ENST00000540846 A0A1B0GX51 115 aa8.03□□□□□ -1.12
SMAD3-204ENST00000540846 Q8N814 137 aa8.03□□□□□ -1.12
SMAD3-204ENST00000540846 TRAV23DV6A0A075B6W5 121 aa8.02□□□□□ -1.13
SMAD3-204ENST00000540846 LOC107984640A0A0U1RRK4 108 aa8.02□□□□□ -1.13
SMAD3-204ENST00000540846 DNAL4O96015 105 aa8.02□□□□□ -1.13
SMAD3-204ENST00000540846 PKD1P98161 4303 aa8.02□□□□□ -1.13
SMAD3-204ENST00000540846 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
SMAD3-204ENST00000540846 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
SMAD3-204ENST00000540846 IGLV5-37A0A075B6J1 123 aa8.01□□□□□ -1.13
SMAD3-204ENST00000540846 SERTAD4-AS1Q5TG53 156 aa8.01□□□□□ -1.13
SMAD3-204ENST00000540846 HECTD4Q9Y4D8 3996 aa8□□□□□ -1.13
SMAD3-204ENST00000540846 BAALC-AS2P0C853 105 aa8□□□□□ -1.13
SMAD3-204ENST00000540846 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
SMAD3-204ENST00000540846 DIRC1Q969H9 104 aa8□□□□□ -1.13
SMAD3-204ENST00000540846 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.99□□□□□ -1.13
SMAD3-204ENST00000540846 TEX49A0A1B0GTD5 131 aa7.99□□□□□ -1.13
SMAD3-204ENST00000540846 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
SMAD3-204ENST00000540846 C22orf24Q9Y442 160 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms