RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 LCE2BO14633 110 aa6.64□□□□□ -1.35
CLIP1-212ENST00000540304 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
CLIP1-212ENST00000540304 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
CLIP1-212ENST00000540304 SDIM1Q6ZPB5 146 aa6.64□□□□□ -1.35
CLIP1-212ENST00000540304 Q8N3U1 123 aa6.64□□□□□ -1.35
CLIP1-212ENST00000540304 DAND5Q8N907 189 aa6.64□□□□□ -1.35
CLIP1-212ENST00000540304 ZNF625Q96I27 306 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-212ENST00000540304 A0A087WVE0 104 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 Q1RN00 199 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 LYPD5Q6UWN5 251 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.63□□□□□ -1.35
CLIP1-212ENST00000540304 J3QL48 77 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 PRSS2P07478 247 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 A0A087WZ39 114 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 A0A0B4J2C4 111 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 GHRHP01286 108 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 LELP1Q5T871 98 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 PRR15Q8IV56 129 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
CLIP1-212ENST00000540304 DNAH3Q8TD57 4116 aa6.62□□□□□ -1.35
CLIP1-212ENST00000540304 RBM3P98179 157 aaKnown RBP6.62□□□□□ -1.35
CLIP1-212ENST00000540304 COX7B2Q8TF08 81 aa6.62□□□□□ -1.35
CLIP1-212ENST00000540304 MGAM2Q2M2H8 2515 aa6.62□□□□□ -1.35
CLIP1-212ENST00000540304 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
CLIP1-212ENST00000540304 H3BNG1 76 aa6.62□□□□□ -1.35
CLIP1-212ENST00000540304 TRIAP1O43715 76 aa6.62□□□□□ -1.35
CLIP1-212ENST00000540304 PRB2P02812 416 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-212ENST00000540304 LINC00269Q8N2A0 174 aa6.61□□□□□ -1.35
CLIP1-212ENST00000540304 A0A0J9YWU9 116 aa6.61□□□□□ -1.35
CLIP1-212ENST00000540304 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
CLIP1-212ENST00000540304 XCL1P47992 114 aa6.61□□□□□ -1.35
CLIP1-212ENST00000540304 Q6ZTC4 211 aa6.61□□□□□ -1.35
CLIP1-212ENST00000540304 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
CLIP1-212ENST00000540304 S100A7L2Q5SY68 101 aa6.6□□□□□ -1.35
CLIP1-212ENST00000540304 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
CLIP1-212ENST00000540304 TOMM7Q9P0U1 55 aa6.6□□□□□ -1.35
CLIP1-212ENST00000540304 REG3AQ06141 175 aa6.6□□□□□ -1.35
CLIP1-212ENST00000540304 H7BZZ5 65 aa6.59□□□□□ -1.35
CLIP1-212ENST00000540304 KPRPQ5T749 579 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-212ENST00000540304 COPS9Q8WXC6 57 aa6.59□□□□□ -1.35
CLIP1-212ENST00000540304 CLEC2BQ92478 149 aa6.59□□□□□ -1.35
CLIP1-212ENST00000540304 IGKV3D-7A0A0C4DH55 119 aa6.59□□□□□ -1.36
CLIP1-212ENST00000540304 C6orf223Q8N319 242 aa6.59□□□□□ -1.36
CLIP1-212ENST00000540304 TRBV7-6A0A0J9YX20 115 aa6.58□□□□□ -1.36
CLIP1-212ENST00000540304 CCKP06307 115 aa6.58□□□□□ -1.36
CLIP1-212ENST00000540304 CD164L2Q6UWJ8 174 aa6.58□□□□□ -1.36
CLIP1-212ENST00000540304 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
CLIP1-212ENST00000540304 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
CLIP1-212ENST00000540304 TRBV30A0A0K0K1B3 111 aa6.57□□□□□ -1.36
CLIP1-212ENST00000540304 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
CLIP1-212ENST00000540304 K7EIL1 84 aa6.57□□□□□ -1.36
CLIP1-212ENST00000540304 COX7A2LO14548 114 aa6.57□□□□□ -1.36
CLIP1-212ENST00000540304 SOSTDC1Q6X4U4 206 aa6.57□□□□□ -1.36
CLIP1-212ENST00000540304 IGLV10-54A0A075B6I4 117 aa6.56□□□□□ -1.36
CLIP1-212ENST00000540304 DEFB131BA0A096LNP1 70 aa6.56□□□□□ -1.36
CLIP1-212ENST00000540304 Q8IZM0 81 aa6.56□□□□□ -1.36
CLIP1-212ENST00000540304 TM2D3Q9BRN9 247 aa6.56□□□□□ -1.36
CLIP1-212ENST00000540304 FAM229BQ4G0N7 80 aa6.56□□□□□ -1.36
CLIP1-212ENST00000540304 PRR34Q9NV39 138 aa6.56□□□□□ -1.36
CLIP1-212ENST00000540304 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
CLIP1-212ENST00000540304 IBA57-AS1B1ANH7 110 aa6.55□□□□□ -1.36
CLIP1-212ENST00000540304 TNP2Q05952 138 aa6.55□□□□□ -1.36
CLIP1-212ENST00000540304 KLK12Q9UKR0 248 aa6.55□□□□□ -1.36
CLIP1-212ENST00000540304 LST1O00453 97 aa6.54□□□□□ -1.36
CLIP1-212ENST00000540304 INAFM2P0DMQ5 153 aa6.54□□□□□ -1.36
CLIP1-212ENST00000540304 LINC00158P58513 81 aa6.54□□□□□ -1.36
CLIP1-212ENST00000540304 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
CLIP1-212ENST00000540304 WFDC10BQ8IUB3 73 aa6.53□□□□□ -1.36
CLIP1-212ENST00000540304 MDFIQ99750 246 aa6.53□□□□□ -1.36
CLIP1-212ENST00000540304 CRPP02741 224 aa6.53□□□□□ -1.36
CLIP1-212ENST00000540304 ENHOQ6UWT2 76 aa6.53□□□□□ -1.36
CLIP1-212ENST00000540304 KIAA0087Q14695 138 aa6.52□□□□□ -1.37
CLIP1-212ENST00000540304 ESRGQ1W209 222 aa6.52□□□□□ -1.37
CLIP1-212ENST00000540304 TRAV10A0A0B4J240 114 aa6.52□□□□□ -1.37
CLIP1-212ENST00000540304 PRR26Q8N8Z3 221 aa6.52□□□□□ -1.37
CLIP1-212ENST00000540304 COL7A1Q02388 2944 aa6.52□□□□□ -1.37
CLIP1-212ENST00000540304 C8orf87E5RJ46 101 aa6.51□□□□□ -1.37
CLIP1-212ENST00000540304 COX6CP09669 75 aa6.5□□□□□ -1.37
CLIP1-212ENST00000540304 LYSTQ99698 3801 aa6.5□□□□□ -1.37
CLIP1-212ENST00000540304 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
CLIP1-212ENST00000540304 STAB2Q8WWQ8 2551 aa6.5□□□□□ -1.37
CLIP1-212ENST00000540304 F8WEM9 126 aa6.5□□□□□ -1.37
CLIP1-212ENST00000540304 Q6JHZ5 121 aa6.5□□□□□ -1.37
CLIP1-212ENST00000540304 LINC00528Q8N1L1 170 aa6.5□□□□□ -1.37
CLIP1-212ENST00000540304 CCL18P55774 89 aa6.49□□□□□ -1.37
CLIP1-212ENST00000540304 SPAG11BQ08648 103 aa6.49□□□□□ -1.37
CLIP1-212ENST00000540304 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
CLIP1-212ENST00000540304 TRAV23DV6A0A075B6W5 121 aa6.48□□□□□ -1.37
CLIP1-212ENST00000540304 COX17Q14061 63 aa6.48□□□□□ -1.37
CLIP1-212ENST00000540304 RMI2Q96E14 147 aa6.48□□□□□ -1.37
CLIP1-212ENST00000540304 SNURFQ9Y675 71 aa6.48□□□□□ -1.37
CLIP1-212ENST00000540304 TRAV13-2A0A0B4J235 113 aa6.48□□□□□ -1.37
CLIP1-212ENST00000540304 RPL28P46779 137 aaKnown RBP6.47□□□□□ -1.37
CLIP1-212ENST00000540304 KTN1-AS1Q86SY8 53 aa6.47□□□□□ -1.37
CLIP1-212ENST00000540304 IGKV2-28A0A075B6P5 120 aa6.47□□□□□ -1.37
CLIP1-212ENST00000540304 IGKV2D-28P01615 120 aa6.47□□□□□ -1.37
CLIP1-212ENST00000540304 LAMTOR3Q9UHA4 124 aa6.46□□□□□ -1.38
CLIP1-212ENST00000540304 LINC00337Q8N6G1 96 aa6.46□□□□□ -1.38
CLIP1-212ENST00000540304 DNAH10OSP0CZ25 163 aa6.45□□□□□ -1.38
CLIP1-212ENST00000540304 C9orf116Q5BN46 136 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms