RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CXCL5P42830 114 aa7.76□□□□□ -1.17
C11orf54-214ENST00000540113 COX17Q14061 63 aa7.76□□□□□ -1.17
C11orf54-214ENST00000540113 STAB1Q9NY15 2570 aa7.76□□□□□ -1.17
C11orf54-214ENST00000540113 EGFEM1PQ0D2K5 195 aa7.76□□□□□ -1.17
C11orf54-214ENST00000540113 C6orf99Q4VX62 202 aa7.76□□□□□ -1.17
C11orf54-214ENST00000540113 TRBV7-7A0A0K0K1E9 115 aa7.75□□□□□ -1.17
C11orf54-214ENST00000540113 HIGD2BQ4VC39 106 aa7.75□□□□□ -1.17
C11orf54-214ENST00000540113 Q6ZTC4 211 aa7.75□□□□□ -1.17
C11orf54-214ENST00000540113 PRR34Q9NV39 138 aa7.75□□□□□ -1.17
C11orf54-214ENST00000540113 ORMDL1Q9P0S3 153 aa7.75□□□□□ -1.17
C11orf54-214ENST00000540113 KLK5Q9Y337 293 aaPredicted RBP7.75□□□□□ -1.17
C11orf54-214ENST00000540113 S100A7L2Q5SY68 101 aa7.74□□□□□ -1.17
C11orf54-214ENST00000540113 Q8N814 137 aa7.74□□□□□ -1.17
C11orf54-214ENST00000540113 TMEM126AQ9H061 195 aa7.74□□□□□ -1.17
C11orf54-214ENST00000540113 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
C11orf54-214ENST00000540113 FAM236AA0A1B0GUQ0 79 aa7.74□□□□□ -1.17
C11orf54-214ENST00000540113 FAM236BA0A1B0GV22 79 aa7.74□□□□□ -1.17
C11orf54-214ENST00000540113 RPL18AQ02543 176 aaKnown RBP7.74□□□□□ -1.17
C11orf54-214ENST00000540113 KPRPQ5T749 579 aaPredicted RBP7.74□□□□□ -1.17
C11orf54-214ENST00000540113 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
C11orf54-214ENST00000540113 NDUFC2O95298 119 aa7.73□□□□□ -1.17
C11orf54-214ENST00000540113 DNAH3Q8TD57 4116 aa7.73□□□□□ -1.17
C11orf54-214ENST00000540113 LINC00846Q9NV44 126 aa7.73□□□□□ -1.17
C11orf54-214ENST00000540113 C6orf48Q9UBA6 75 aa7.73□□□□□ -1.17
C11orf54-214ENST00000540113 SS18L2Q9UHA2 77 aa7.73□□□□□ -1.17
C11orf54-214ENST00000540113 SDIM1Q6ZPB5 146 aa7.72□□□□□ -1.17
C11orf54-214ENST00000540113 OBSCN-AS1Q96MR7 158 aa7.72□□□□□ -1.17
C11orf54-214ENST00000540113 IGKV3D-7A0A0C4DH55 119 aa7.71□□□□□ -1.17
C11orf54-214ENST00000540113 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
C11orf54-214ENST00000540113 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.17
C11orf54-214ENST00000540113 A0A0J9YWU9 116 aa7.7□□□□□ -1.18
C11orf54-214ENST00000540113 MDFIQ99750 246 aa7.7□□□□□ -1.18
C11orf54-214ENST00000540113 ESRGQ1W209 222 aa7.69□□□□□ -1.18
C11orf54-214ENST00000540113 LINC00167Q96N53 147 aa7.69□□□□□ -1.18
C11orf54-214ENST00000540113 MAST4O15021 2626 aa7.69□□□□□ -1.18
C11orf54-214ENST00000540113 H3BNG1 76 aa7.69□□□□□ -1.18
C11orf54-214ENST00000540113 TRBV10-3A0A0K0K1G6 114 aa7.68□□□□□ -1.18
C11orf54-214ENST00000540113 PRB2P02812 416 aaPredicted RBP7.68□□□□□ -1.18
C11orf54-214ENST00000540113 LINC00575Q6W349 94 aa7.68□□□□□ -1.18
C11orf54-214ENST00000540113 NOTCH1P46531 2555 aa7.67□□□□□ -1.18
C11orf54-214ENST00000540113 CAMK2N2Q96S95 79 aa7.67□□□□□ -1.18
C11orf54-214ENST00000540113 A0A087WVE0 104 aa7.67□□□□□ -1.18
C11orf54-214ENST00000540113 KRTAP26-1Q6PEX3 210 aa7.66□□□□□ -1.18
C11orf54-214ENST00000540113 Q6ZRU5 148 aa7.66□□□□□ -1.18
C11orf54-214ENST00000540113 IMUPQ9GZP8 106 aa7.66□□□□□ -1.18
C11orf54-214ENST00000540113 hADV29S1A0JD25 119 aa7.66□□□□□ -1.18
C11orf54-214ENST00000540113 TMEM256-PLSCR3K7ERE1 68 aa7.66□□□□□ -1.18
C11orf54-214ENST00000540113 IGLV6-57P01721 117 aa7.66□□□□□ -1.18
C11orf54-214ENST00000540113 CCKP06307 115 aa7.66□□□□□ -1.18
C11orf54-214ENST00000540113 C15orf56Q8N910 161 aa7.65□□□□□ -1.18
C11orf54-214ENST00000540113 DEFB131BA0A096LNP1 70 aa7.64□□□□□ -1.19
C11orf54-214ENST00000540113 A0A1B0GX51 115 aa7.64□□□□□ -1.19
C11orf54-214ENST00000540113 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
C11orf54-214ENST00000540113 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
C11orf54-214ENST00000540113 M0R2N4 97 aa7.63□□□□□ -1.19
C11orf54-214ENST00000540113 Q6ZQY7 126 aa7.63□□□□□ -1.19
C11orf54-214ENST00000540113 TRAV23DV6A0A075B6W5 121 aa7.63□□□□□ -1.19
C11orf54-214ENST00000540113 JMJD7-PLA2G4BH0Y9G9 81 aa7.62□□□□□ -1.19
C11orf54-214ENST00000540113 C11orf45Q8TAV5 145 aa7.62□□□□□ -1.19
C11orf54-214ENST00000540113 LAMTOR3Q9UHA4 124 aa7.62□□□□□ -1.19
C11orf54-214ENST00000540113 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
C11orf54-214ENST00000540113 Q6JHZ5 121 aa7.61□□□□□ -1.19
C11orf54-214ENST00000540113 VPREB1P12018 145 aa7.6□□□□□ -1.19
C11orf54-214ENST00000540113 MUC7Q8TAX7 377 aa7.6□□□□□ -1.19
C11orf54-214ENST00000540113 DIRC1Q969H9 104 aa7.6□□□□□ -1.19
C11orf54-214ENST00000540113 COL6A5A8TX70 2615 aa7.6□□□□□ -1.19
C11orf54-214ENST00000540113 ZNF73O43830 326 aaPredicted RBP7.6□□□□□ -1.19
C11orf54-214ENST00000540113 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
C11orf54-214ENST00000540113 Q6ZRP5 223 aa7.6□□□□□ -1.19
C11orf54-214ENST00000540113 MRAPQ8TCY5 172 aa7.59□□□□□ -1.19
C11orf54-214ENST00000540113 RBM3P98179 157 aaKnown RBP7.59□□□□□ -1.19
C11orf54-214ENST00000540113 LINC01556Q5JQF7 62 aa7.58□□□□□ -1.2
C11orf54-214ENST00000540113 NBEAL1Q6ZS30 2694 aa7.58□□□□□ -1.2
C11orf54-214ENST00000540113 COX7BP24311 80 aa7.58□□□□□ -1.2
C11orf54-214ENST00000540113 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
C11orf54-214ENST00000540113 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
C11orf54-214ENST00000540113 Q6ZQT0 140 aa7.57□□□□□ -1.2
C11orf54-214ENST00000540113 K7EIL1 84 aa7.57□□□□□ -1.2
C11orf54-214ENST00000540113 C9orf153Q5TBE3 101 aa7.57□□□□□ -1.2
C11orf54-214ENST00000540113 FAM19A1Q7Z5A9 133 aa7.57□□□□□ -1.2
C11orf54-214ENST00000540113 C3orf22Q8N5N4 141 aa7.57□□□□□ -1.2
C11orf54-214ENST00000540113 TM2D3Q9BRN9 247 aa7.56□□□□□ -1.2
C11orf54-214ENST00000540113 M0R378 163 aa7.55□□□□□ -1.2
C11orf54-214ENST00000540113 ELOF1P60002 83 aaKnown RBP7.55□□□□□ -1.2
C11orf54-214ENST00000540113 SYCNQ0VAF6 134 aa7.55□□□□□ -1.2
C11orf54-214ENST00000540113 C2orf48Q96LS8 159 aa7.55□□□□□ -1.2
C11orf54-214ENST00000540113 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
C11orf54-214ENST00000540113 HUWE1Q7Z6Z7 4374 aaKnown RBP7.54□□□□□ -1.2
C11orf54-214ENST00000540113 DNAH10OSP0CZ25 163 aa7.54□□□□□ -1.2
C11orf54-214ENST00000540113 TRAV10A0A0B4J240 114 aa7.53□□□□□ -1.2
C11orf54-214ENST00000540113 DSCR8Q96T75 97 aa7.53□□□□□ -1.2
C11orf54-214ENST00000540113 LINC00588Q9Y4M8 146 aa7.53□□□□□ -1.2
C11orf54-214ENST00000540113 USP17L23D6RBM5 183 aa7.53□□□□□ -1.2
C11orf54-214ENST00000540113 UQCRQO14949 82 aa7.53□□□□□ -1.2
C11orf54-214ENST00000540113 COX7CP15954 63 aa7.53□□□□□ -1.2
C11orf54-214ENST00000540113 UBL5Q9BZL1 73 aa7.53□□□□□ -1.2
C11orf54-214ENST00000540113 CYSTM1Q9H1C7 97 aa7.53□□□□□ -1.2
C11orf54-214ENST00000540113 ATOX1O00244 68 aa7.52□□□□□ -1.2
C11orf54-214ENST00000540113 FAM168BA1KXE4 195 aa7.52□□□□□ -1.21
C11orf54-214ENST00000540113 LOC110117498A0A087WWA1 95 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms