RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SPANXCQ9NY87 97 aa14.88□□□□□ -0.03
TMEM260-202ENST00000538838 A0A087WYN8 130 aa14.88□□□□□ -0.03
TMEM260-202ENST00000538838 A0A1W2PNN7 141 aa14.88□□□□□ -0.03
TMEM260-202ENST00000538838 EIF4EBP3O60516 100 aaPredicted RBP14.88□□□□□ -0.03
TMEM260-202ENST00000538838 SOSTDC1Q6X4U4 206 aa14.88□□□□□ -0.03
TMEM260-202ENST00000538838 SCXQ7RTU7 201 aa14.87□□□□□ -0.03
TMEM260-202ENST00000538838 FAM19A5Q7Z5A7 132 aaPredicted RBP14.87□□□□□ -0.03
TMEM260-202ENST00000538838 SERTAD4-AS1Q5TG53 156 aa14.86□□□□□ -0.03
TMEM260-202ENST00000538838 Q8NDZ9 215 aa14.86□□□□□ -0.03
TMEM260-202ENST00000538838 UQCR10Q9UDW1 63 aa14.86□□□□□ -0.03
TMEM260-202ENST00000538838 KRTAP7-1Q8IUC3 87 aa14.85□□□□□ -0.03
TMEM260-202ENST00000538838 CIRBP-AS1Q8TBR5 109 aa14.85□□□□□ -0.03
TMEM260-202ENST00000538838 LINC00308Q8TCZ7 52 aa14.85□□□□□ -0.03
TMEM260-202ENST00000538838 MIEN1Q9BRT3 115 aa14.85□□□□□ -0.03
TMEM260-202ENST00000538838 SPANXB1Q9NS25 103 aaPredicted RBP14.85□□□□□ -0.03
TMEM260-202ENST00000538838 PLAC8Q9NZF1 115 aa14.84□□□□□ -0.03
TMEM260-202ENST00000538838 HIGD1BQ9P298 99 aa14.84□□□□□ -0.03
TMEM260-202ENST00000538838 APOBP04114 4563 aaKnown RBP14.84□□□□□ -0.03
TMEM260-202ENST00000538838 SRSF9Q13242 221 aaKnown RBP eCLIP14.83□□□□□ -0.04
TMEM260-202ENST00000538838 LOC107984156A0A0G2JMH3 177 aa14.82□□□□□ -0.04
TMEM260-202ENST00000538838 ARL17AQ8IVW1 177 aa14.82□□□□□ -0.04
TMEM260-202ENST00000538838 XGP55808 180 aa14.81□□□□□ -0.04
TMEM260-202ENST00000538838 Q6ZVH6 145 aa14.81□□□□□ -0.04
TMEM260-202ENST00000538838 PLA2G2DQ9UNK4 145 aa14.81□□□□□ -0.04
TMEM260-202ENST00000538838 VPREB1P12018 145 aa14.81□□□□□ -0.04
TMEM260-202ENST00000538838 MUSTN1Q8IVN3 82 aa14.8□□□□□ -0.04
TMEM260-202ENST00000538838 HIST1H4GQ99525 98 aa14.79□□□□□ -0.04
TMEM260-202ENST00000538838 EPM2AB3EWF7 344 aa14.78□□□□□ -0.04
TMEM260-202ENST00000538838 M0QXV9 152 aa14.78□□□□□ -0.04
TMEM260-202ENST00000538838 IFITM1P13164 125 aa14.78□□□□□ -0.04
TMEM260-202ENST00000538838 RPL24P83731 157 aaKnown RBP14.77□□□□□ -0.04
TMEM260-202ENST00000538838 PRR3P79522 188 aaKnown RBP14.77□□□□□ -0.05
TMEM260-202ENST00000538838 NKAPP1Q8N9T2 125 aa14.77□□□□□ -0.05
TMEM260-202ENST00000538838 C22orf24Q9Y442 160 aa14.77□□□□□ -0.05
TMEM260-202ENST00000538838 IGLV5-37A0A075B6J1 123 aa14.76□□□□□ -0.05
TMEM260-202ENST00000538838 HNRNPA3P51991 378 aaKnown RBP14.76□□□□□ -0.05
TMEM260-202ENST00000538838 PHF5AQ7RTV0 110 aaKnown RBP14.76□□□□□ -0.05
TMEM260-202ENST00000538838 COPS9Q8WXC6 57 aa14.76□□□□□ -0.05
TMEM260-202ENST00000538838 TSTD3H0UI37 97 aa14.75□□□□□ -0.05
TMEM260-202ENST00000538838 NCR3O14931 201 aa14.75□□□□□ -0.05
TMEM260-202ENST00000538838 CDK2AP2O75956 126 aa14.74□□□□□ -0.05
TMEM260-202ENST00000538838 PPDPFQ9H3Y8 114 aa14.74□□□□□ -0.05
TMEM260-202ENST00000538838 NDUFC2O95298 119 aa14.73□□□□□ -0.05
TMEM260-202ENST00000538838 MRPL55Q7Z7F7 128 aaKnown RBP14.72□□□□□ -0.05
TMEM260-202ENST00000538838 GAGE10A6NGK3 116 aa14.71□□□□□ -0.05
TMEM260-202ENST00000538838 BIRC6Q9NR09 4857 aa14.71□□□□□ -0.06
TMEM260-202ENST00000538838 TAL2Q16559 108 aa14.7□□□□□ -0.06
TMEM260-202ENST00000538838 C7orf33Q8WU49 177 aa14.7□□□□□ -0.06
TMEM260-202ENST00000538838 HSD52Q0P140 79 aa14.69□□□□□ -0.06
TMEM260-202ENST00000538838 LINC00167Q96N53 147 aa14.69□□□□□ -0.06
TMEM260-202ENST00000538838 RYR1P21817 5038 aa14.68□□□□□ -0.06
TMEM260-202ENST00000538838 KIAA1109Q2LD37 5005 aa14.68□□□□□ -0.06
TMEM260-202ENST00000538838 IGKV2-28A0A075B6P5 120 aa14.68□□□□□ -0.06
TMEM260-202ENST00000538838 M0R378 163 aa14.68□□□□□ -0.06
TMEM260-202ENST00000538838 IGKV2D-28P01615 120 aa14.68□□□□□ -0.06
TMEM260-202ENST00000538838 A4D1N5 150 aa14.67□□□□□ -0.06
TMEM260-202ENST00000538838 CEND1Q8N111 149 aa14.67□□□□□ -0.06
TMEM260-202ENST00000538838 LBHQ53QV2 105 aaPredicted RBP14.66□□□□□ -0.06
TMEM260-202ENST00000538838 TRBV10-2A0A0K0K1G8 114 aa14.66□□□□□ -0.06
TMEM260-202ENST00000538838 RPL37AP8A6NKH3 93 aa14.66□□□□□ -0.06
TMEM260-202ENST00000538838 SMR3BP02814 79 aaPredicted RBP14.66□□□□□ -0.06
TMEM260-202ENST00000538838 UBE2BP63146 152 aa14.66□□□□□ -0.06
TMEM260-202ENST00000538838 KRTAP11-1Q8IUC1 163 aa14.66□□□□□ -0.06
TMEM260-202ENST00000538838 FXYD2P54710 66 aa14.63□□□□□ -0.07
TMEM260-202ENST00000538838 HSPG2P98160 4391 aa14.63□□□□□ -0.07
TMEM260-202ENST00000538838 CTAG1AP78358 180 aa14.63□□□□□ -0.07
TMEM260-202ENST00000538838 LINC00337Q8N6G1 96 aa14.63□□□□□ -0.07
TMEM260-202ENST00000538838 TRBV10-3A0A0K0K1G6 114 aa14.61□□□□□ -0.07
TMEM260-202ENST00000538838 LINC00528Q8N1L1 170 aa14.61□□□□□ -0.07
TMEM260-202ENST00000538838 IGLV1-50A0A075B6I6 118 aa14.6□□□□□ -0.07
TMEM260-202ENST00000538838 DDTP30046 118 aa14.6□□□□□ -0.07
TMEM260-202ENST00000538838 S100A7L2Q5SY68 101 aa14.6□□□□□ -0.07
TMEM260-202ENST00000538838 OR13C6PQ8NH95 151 aa14.59□□□□□ -0.07
TMEM260-202ENST00000538838 IGLV6-57P01721 117 aa14.58□□□□□ -0.08
TMEM260-202ENST00000538838 TMEM238LA0A1B0GVL6 79 aa14.56□□□□□ -0.08
TMEM260-202ENST00000538838 A6NJY4 79 aa14.56□□□□□ -0.08
TMEM260-202ENST00000538838 PSORS1C2Q9UIG4 136 aa14.56□□□□□ -0.08
TMEM260-202ENST00000538838 A6NDN8 102 aa14.55□□□□□ -0.08
TMEM260-202ENST00000538838 CFC1BP0CG36 223 aa14.55□□□□□ -0.08
TMEM260-202ENST00000538838 CFC1P0CG37 223 aa14.55□□□□□ -0.08
TMEM260-202ENST00000538838 HINT1P49773 126 aaPredicted RBP14.55□□□□□ -0.08
TMEM260-202ENST00000538838 TRAV13-2A0A0B4J235 113 aa14.54□□□□□ -0.08
TMEM260-202ENST00000538838 BVES-AS1Q5T3Y7 98 aa14.54□□□□□ -0.08
TMEM260-202ENST00000538838 TMEM126AQ9H061 195 aa14.54□□□□□ -0.08
TMEM260-202ENST00000538838 NHP2Q9NX24 153 aaKnown RBP14.52□□□□□ -0.08
TMEM260-202ENST00000538838 FAT1Q14517 4588 aa14.52□□□□□ -0.08
TMEM260-202ENST00000538838 A0A0B4J2C4 111 aa14.52□□□□□ -0.09
TMEM260-202ENST00000538838 RPL37AP61513 92 aaKnown RBP14.52□□□□□ -0.09
TMEM260-202ENST00000538838 KRTAP17-1Q9BYP8 105 aa14.52□□□□□ -0.09
TMEM260-202ENST00000538838 KCNQ1DNQ9H478 68 aa14.52□□□□□ -0.09
TMEM260-202ENST00000538838 TRAV23DV6A0A075B6W5 121 aa14.51□□□□□ -0.09
TMEM260-202ENST00000538838 M0R143 59 aa14.51□□□□□ -0.09
TMEM260-202ENST00000538838 PRYO14603 147 aa14.51□□□□□ -0.09
TMEM260-202ENST00000538838 RAB37Q96AX2 223 aa14.51□□□□□ -0.09
TMEM260-202ENST00000538838 RPL13AP40429 203 aaKnown RBP14.5□□□□□ -0.09
TMEM260-202ENST00000538838 C1orf137Q5JT78 98 aa14.5□□□□□ -0.09
TMEM260-202ENST00000538838 REG3GQ6UW15 175 aa14.5□□□□□ -0.09
TMEM260-202ENST00000538838 K7ERJ3 54 aa14.48□□□□□ -0.09
TMEM260-202ENST00000538838 VPS13BQ7Z7G8 4022 aa14.47□□□□□ -0.09
TMEM260-202ENST00000538838 PCP4L1A6NKN8 68 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms