RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 FAM229AH3BQW9 127 aa4.73□□□□□ -1.65
SORT1-209ENST00000538502 H7BZZ5 65 aa4.73□□□□□ -1.65
SORT1-209ENST00000538502 HIVEP2P31629 2446 aa4.73□□□□□ -1.65
SORT1-209ENST00000538502 LY6G6CO95867 125 aa4.73□□□□□ -1.65
SORT1-209ENST00000538502 Q6ZRP5 223 aa4.73□□□□□ -1.65
SORT1-209ENST00000538502 LINC00336Q6ZUF6 198 aa4.73□□□□□ -1.65
SORT1-209ENST00000538502 TET2Q6N021 2002 aaPredicted RBP4.72□□□□□ -1.65
SORT1-209ENST00000538502 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
SORT1-209ENST00000538502 PTPRBP23467 1997 aa4.72□□□□□ -1.65
SORT1-209ENST00000538502 C16orf90A8MZG2 172 aa4.71□□□□□ -1.66
SORT1-209ENST00000538502 C1orf134Q5TEV5 83 aa4.71□□□□□ -1.66
SORT1-209ENST00000538502 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
SORT1-209ENST00000538502 AGRNO00468 2067 aa4.71□□□□□ -1.66
SORT1-209ENST00000538502 FAM208BQ5VWN6 2430 aa4.7□□□□□ -1.66
SORT1-209ENST00000538502 TECTAO75443 2155 aa4.7□□□□□ -1.66
SORT1-209ENST00000538502 K7EQZ3 153 aa4.7□□□□□ -1.66
SORT1-209ENST00000538502 KCNQ1DNQ9H478 68 aa4.7□□□□□ -1.66
SORT1-209ENST00000538502 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
SORT1-209ENST00000538502 Q1T7F1 81 aa4.69□□□□□ -1.66
SORT1-209ENST00000538502 RPL37AP61513 92 aaKnown RBP4.69□□□□□ -1.66
SORT1-209ENST00000538502 CSPG4Q6UVK1 2322 aa4.69□□□□□ -1.66
SORT1-209ENST00000538502 EPM2AB3EWF7 344 aa4.68□□□□□ -1.66
SORT1-209ENST00000538502 PRO3102Q9H379 93 aa4.68□□□□□ -1.66
SORT1-209ENST00000538502 CDSNQ15517 529 aa4.68□□□□□ -1.66
SORT1-209ENST00000538502 LINC00528Q8N1L1 170 aa4.68□□□□□ -1.66
SORT1-209ENST00000538502 PLA2G2DQ9UNK4 145 aa4.67□□□□□ -1.66
SORT1-209ENST00000538502 EP400Q96L91 3159 aa4.67□□□□□ -1.66
SORT1-209ENST00000538502 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
SORT1-209ENST00000538502 IGLV1-50A0A075B6I6 118 aa4.66□□□□□ -1.66
SORT1-209ENST00000538502 ANKHD1Q8IWZ3 2542 aaKnown RBP4.66□□□□□ -1.66
SORT1-209ENST00000538502 ST20-AS1Q8NBB2 130 aa4.66□□□□□ -1.66
SORT1-209ENST00000538502 OBSCN-AS1Q96MR7 158 aa4.66□□□□□ -1.66
SORT1-209ENST00000538502 COL27A1Q8IZC6 1860 aaPredicted RBP4.66□□□□□ -1.66
SORT1-209ENST00000538502 SSBP3-AS1Q7Z2R9 100 aa4.65□□□□□ -1.66
SORT1-209ENST00000538502 COL4A2P08572 1712 aa4.65□□□□□ -1.66
SORT1-209ENST00000538502 C8orf17Q9NRJ1 99 aa4.65□□□□□ -1.66
SORT1-209ENST00000538502 PLA2G2AP14555 144 aa4.64□□□□□ -1.67
SORT1-209ENST00000538502 SPACA4Q8TDM5 124 aa4.64□□□□□ -1.67
SORT1-209ENST00000538502 MUC4Q99102 2169 aa4.63□□□□□ -1.67
SORT1-209ENST00000538502 A0A1B0GVX0 72 aa4.63□□□□□ -1.67
SORT1-209ENST00000538502 DNAH10OSP0CZ25 163 aa4.63□□□□□ -1.67
SORT1-209ENST00000538502 PHF5AQ7RTV0 110 aaKnown RBP4.63□□□□□ -1.67
SORT1-209ENST00000538502 MDFIQ99750 246 aa4.63□□□□□ -1.67
SORT1-209ENST00000538502 OTOGLQ3ZCN5 2332 aa4.63□□□□□ -1.67
SORT1-209ENST00000538502 IGFL1Q6UW32 110 aa4.63□□□□□ -1.67
SORT1-209ENST00000538502 TLX1NBP0CAT3 122 aa4.63□□□□□ -1.67
SORT1-209ENST00000538502 MUC6Q6W4X9 2439 aa4.62□□□□□ -1.67
SORT1-209ENST00000538502 NAV3Q8IVL0 2385 aa4.62□□□□□ -1.67
SORT1-209ENST00000538502 A0A1W2PPR1 153 aa4.62□□□□□ -1.67
SORT1-209ENST00000538502 SPG11Q96JI7 2443 aa4.62□□□□□ -1.67
SORT1-209ENST00000538502 PTPN13Q12923 2485 aa4.61□□□□□ -1.67
SORT1-209ENST00000538502 Q8NAQ8 132 aa4.61□□□□□ -1.67
SORT1-209ENST00000538502 ZFHX2Q9C0A1 2572 aaPredicted RBP4.61□□□□□ -1.67
SORT1-209ENST00000538502 IGLV8-61A0A075B6I0 122 aa4.6□□□□□ -1.67
SORT1-209ENST00000538502 Q96NJ1 140 aa4.6□□□□□ -1.67
SORT1-209ENST00000538502 Q8N377 158 aa4.6□□□□□ -1.67
SORT1-209ENST00000538502 TYMSOSQ8TAI1 123 aa4.6□□□□□ -1.67
SORT1-209ENST00000538502 Q75L30 129 aa4.6□□□□□ -1.67
SORT1-209ENST00000538502 PRR34Q9NV39 138 aa4.6□□□□□ -1.67
SORT1-209ENST00000538502 SONP18583 2426 aaKnown RBP4.59□□□□□ -1.67
SORT1-209ENST00000538502 RTL8CO15255 209 aa4.59□□□□□ -1.67
SORT1-209ENST00000538502 C15orf56Q8N910 161 aa4.58□□□□□ -1.68
SORT1-209ENST00000538502 PCSK5Q92824 1860 aa4.58□□□□□ -1.68
SORT1-209ENST00000538502 FAM104AQ969W3 186 aa4.58□□□□□ -1.68
SORT1-209ENST00000538502 SMR3AQ99954 134 aa4.57□□□□□ -1.68
SORT1-209ENST00000538502 OCR1Q9BZK8 76 aa4.57□□□□□ -1.68
SORT1-209ENST00000538502 NBDYA0A0U1RRE5 68 aa4.57□□□□□ -1.68
SORT1-209ENST00000538502 KRTAP10-9P60411 292 aa4.57□□□□□ -1.68
SORT1-209ENST00000538502 LINC00588Q9Y4M8 146 aa4.57□□□□□ -1.68
SORT1-209ENST00000538502 ACACBO00763 2458 aa4.56□□□□□ -1.68
SORT1-209ENST00000538502 IGLV5-48A0A075B6I7 105 aa4.56□□□□□ -1.68
SORT1-209ENST00000538502 CSNK1G2-AS1Q8NCQ2 148 aa4.56□□□□□ -1.68
SORT1-209ENST00000538502 LINC00612Q8N6U2 182 aa4.56□□□□□ -1.68
SORT1-209ENST00000538502 IGLV5-37A0A075B6J1 123 aa4.56□□□□□ -1.68
SORT1-209ENST00000538502 EIF4EBP3O60516 100 aaPredicted RBP4.56□□□□□ -1.68
SORT1-209ENST00000538502 ATRXP46100 2492 aa4.55□□□□□ -1.68
SORT1-209ENST00000538502 Q5XG85 94 aa4.55□□□□□ -1.68
SORT1-209ENST00000538502 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
SORT1-209ENST00000538502 IGLV7-46A0A075B6I9 117 aa4.54□□□□□ -1.68
SORT1-209ENST00000538502 FAM168BA1KXE4 195 aa4.54□□□□□ -1.68
SORT1-209ENST00000538502 HIVEP3Q5T1R4 2406 aa4.54□□□□□ -1.68
SORT1-209ENST00000538502 C9orf129Q5T035 196 aaKnown RBP4.54□□□□□ -1.68
SORT1-209ENST00000538502 APLNQ9ULZ1 77 aa4.53□□□□□ -1.68
SORT1-209ENST00000538502 C2CD3Q4AC94 2353 aa4.53□□□□□ -1.68
SORT1-209ENST00000538502 PLA2G1BP04054 148 aaKnown RBP4.53□□□□□ -1.68
SORT1-209ENST00000538502 DSCR10P59022 87 aa4.53□□□□□ -1.68
SORT1-209ENST00000538502 CHTF8P0CG12 524 aa4.53□□□□□ -1.68
SORT1-209ENST00000538502 ZNF861PO60384 105 aa4.52□□□□□ -1.69
SORT1-209ENST00000538502 LINC01558Q9Y6Z2 57 aa4.52□□□□□ -1.69
SORT1-209ENST00000538502 A0A1W2PNM2 257 aa4.52□□□□□ -1.69
SORT1-209ENST00000538502 SPRR4Q96PI1 79 aa4.52□□□□□ -1.69
SORT1-209ENST00000538502 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
SORT1-209ENST00000538502 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
SORT1-209ENST00000538502 CUL9Q8IWT3 2517 aa4.49□□□□□ -1.69
SORT1-209ENST00000538502 ABCA2Q9BZC7 2435 aa4.49□□□□□ -1.69
SORT1-209ENST00000538502 ASB16-AS1Q495Z4 193 aa4.49□□□□□ -1.69
SORT1-209ENST00000538502 GOLGB1Q14789 3259 aaKnown RBP4.48□□□□□ -1.69
SORT1-209ENST00000538502 CACNA1AO00555 2505 aa4.48□□□□□ -1.69
SORT1-209ENST00000538502 CNBPP62633 177 aaKnown RBP4.48□□□□□ -1.69
SORT1-209ENST00000538502 BDP1A6H8Y1 2624 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms