RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 INAFM2P0DMQ5 153 aa5.71□□□□□ -1.5
SFSWAP-202ENST00000535202 MALP21145 153 aa5.71□□□□□ -1.5
SFSWAP-202ENST00000535202 Q1RN00 199 aa5.71□□□□□ -1.5
SFSWAP-202ENST00000535202 SFTA2Q6UW10 78 aa5.71□□□□□ -1.5
SFSWAP-202ENST00000535202 EPM2AB3EWF7 344 aa5.7□□□□□ -1.5
SFSWAP-202ENST00000535202 TIMM17BO60830 172 aa5.7□□□□□ -1.5
SFSWAP-202ENST00000535202 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
SFSWAP-202ENST00000535202 Q8N814 137 aa5.7□□□□□ -1.5
SFSWAP-202ENST00000535202 DPH3P1Q9H4G8 78 aa5.7□□□□□ -1.5
SFSWAP-202ENST00000535202 EIF4EBP3O60516 100 aaPredicted RBP5.69□□□□□ -1.5
SFSWAP-202ENST00000535202 NDUFC2O95298 119 aa5.69□□□□□ -1.5
SFSWAP-202ENST00000535202 RPL18AQ02543 176 aaKnown RBP5.69□□□□□ -1.5
SFSWAP-202ENST00000535202 DAZ4Q86SG3 579 aaKnown RBP5.69□□□□□ -1.5
SFSWAP-202ENST00000535202 DAZ3Q9NR90 486 aaKnown RBP5.69□□□□□ -1.5
SFSWAP-202ENST00000535202 TRAV8-3A0A0A6YYJ7 113 aa5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 ZNF22P17026 224 aaPredicted RBP5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 TSPEAR-AS2P59090 65 aa5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 HAMPP81172 84 aa5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 RPL36AP83881 106 aaKnown RBP5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 SPANXN1Q5VSR9 72 aa5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 Q5XG85 94 aa5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 MUSTN1Q8IVN3 82 aa5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 COPS9Q8WXC6 57 aa5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 RPL36ALQ969Q0 106 aaKnown RBP5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 DNAH8Q96JB1 4490 aa5.68□□□□□ -1.5
SFSWAP-202ENST00000535202 TRBV10-1A0A0K0K1A3 114 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 TRBV6-5A0A0K0K1A5 114 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 VCYO14598 125 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 LECT2O14960 151 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 BCE1O60756 84 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 MRPS36P82909 103 aaKnown RBP5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 Q5VSD8 79 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 Q6JHZ5 121 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 TIMM21Q9BVV7 248 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 FAT1Q14517 4588 aa5.67□□□□□ -1.5
SFSWAP-202ENST00000535202 TRAV13-1A0A0B4J241 112 aa5.66□□□□□ -1.5
SFSWAP-202ENST00000535202 TSHBP01222 138 aa5.66□□□□□ -1.5
SFSWAP-202ENST00000535202 SMR3BP02814 79 aaPredicted RBP5.66□□□□□ -1.5
SFSWAP-202ENST00000535202 MIAQ16674 131 aa5.66□□□□□ -1.5
SFSWAP-202ENST00000535202 KLK12Q9UKR0 248 aa5.66□□□□□ -1.5
SFSWAP-202ENST00000535202 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.65□□□□□ -1.5
SFSWAP-202ENST00000535202 IGKV2D-24A0A075B6R9 120 aa5.65□□□□□ -1.5
SFSWAP-202ENST00000535202 F5H697 171 aa5.65□□□□□ -1.5
SFSWAP-202ENST00000535202 POLR2KP53803 58 aaKnown RBP5.65□□□□□ -1.5
SFSWAP-202ENST00000535202 RMI2Q96E14 147 aa5.65□□□□□ -1.5
SFSWAP-202ENST00000535202 LITAFQ99732 161 aa5.65□□□□□ -1.5
SFSWAP-202ENST00000535202 TRAV26-2A0A0B4J265 109 aa5.64□□□□□ -1.51
SFSWAP-202ENST00000535202 TRBV27A0A0K0K1C4 114 aa5.64□□□□□ -1.51
SFSWAP-202ENST00000535202 hADV29S1A0JD25 119 aa5.64□□□□□ -1.51
SFSWAP-202ENST00000535202 I3L3M4 83 aa5.64□□□□□ -1.51
SFSWAP-202ENST00000535202 ATP5EP2Q5VTU8 51 aa5.64□□□□□ -1.51
SFSWAP-202ENST00000535202 SMCR5Q8TEV8 140 aa5.64□□□□□ -1.51
SFSWAP-202ENST00000535202 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
SFSWAP-202ENST00000535202 PYGO1Q9Y3Y4 419 aa5.64□□□□□ -1.51
SFSWAP-202ENST00000535202 TRBV6-8A0A0A6YYG3 113 aa5.63□□□□□ -1.51
SFSWAP-202ENST00000535202 FAM229AH3BQW9 127 aa5.63□□□□□ -1.51
SFSWAP-202ENST00000535202 H7C2G1 150 aa5.63□□□□□ -1.51
SFSWAP-202ENST00000535202 COX7A2LO14548 114 aa5.63□□□□□ -1.51
SFSWAP-202ENST00000535202 CRPP02741 224 aa5.63□□□□□ -1.51
SFSWAP-202ENST00000535202 MGPP08493 103 aa5.63□□□□□ -1.51
SFSWAP-202ENST00000535202 FAM30AQ9NZY2 134 aa5.63□□□□□ -1.51
SFSWAP-202ENST00000535202 SERP1Q9Y6X1 66 aa5.63□□□□□ -1.51
SFSWAP-202ENST00000535202 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
SFSWAP-202ENST00000535202 NPC2P61916 151 aa5.62□□□□□ -1.51
SFSWAP-202ENST00000535202 C4orf26Q17RF5 130 aa5.62□□□□□ -1.51
SFSWAP-202ENST00000535202 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
SFSWAP-202ENST00000535202 KIF25-AS1Q9Y6Z4 181 aa5.62□□□□□ -1.51
SFSWAP-202ENST00000535202 ANGP03950 147 aaKnown RBP5.61□□□□□ -1.51
SFSWAP-202ENST00000535202 S100A7L2Q5SY68 101 aa5.61□□□□□ -1.51
SFSWAP-202ENST00000535202 HRCT1Q6UXD1 115 aa5.61□□□□□ -1.51
SFSWAP-202ENST00000535202 RPL39LQ96EH5 51 aaKnown RBP5.61□□□□□ -1.51
SFSWAP-202ENST00000535202 TINCRA0A1B0GVN0 87 aa5.6□□□□□ -1.51
SFSWAP-202ENST00000535202 OXTP01178 125 aa5.6□□□□□ -1.51
SFSWAP-202ENST00000535202 PFN2P35080 140 aa5.6□□□□□ -1.51
SFSWAP-202ENST00000535202 ATP5EP56381 51 aaPredicted RBP5.6□□□□□ -1.51
SFSWAP-202ENST00000535202 SUMO4Q6EEV6 95 aa5.6□□□□□ -1.51
SFSWAP-202ENST00000535202 CLPSL2Q6UWE3 100 aa5.6□□□□□ -1.51
SFSWAP-202ENST00000535202 ENHOQ6UWT2 76 aa5.6□□□□□ -1.51
SFSWAP-202ENST00000535202 NTM-AS1Q6ZSK4 140 aa5.6□□□□□ -1.51
SFSWAP-202ENST00000535202 SMIM26A0A096LP01 95 aa5.59□□□□□ -1.51
SFSWAP-202ENST00000535202 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
SFSWAP-202ENST00000535202 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.51
SFSWAP-202ENST00000535202 M0QY20 66 aa5.59□□□□□ -1.51
SFSWAP-202ENST00000535202 Q6ZSA8 131 aa5.59□□□□□ -1.51
SFSWAP-202ENST00000535202 CLEC2BQ92478 149 aa5.59□□□□□ -1.51
SFSWAP-202ENST00000535202 OBSCN-AS1Q96MR7 158 aa5.59□□□□□ -1.51
SFSWAP-202ENST00000535202 USP17L23D6RBM5 183 aa5.58□□□□□ -1.52
SFSWAP-202ENST00000535202 BAALC-AS2P0C853 105 aa5.58□□□□□ -1.52
SFSWAP-202ENST00000535202 CIRBPQ14011 172 aaKnown RBP5.58□□□□□ -1.52
SFSWAP-202ENST00000535202 C14orf177Q52M58 125 aa5.58□□□□□ -1.52
SFSWAP-202ENST00000535202 NDUFA12Q9UI09 145 aa5.58□□□□□ -1.52
SFSWAP-202ENST00000535202 NDUFA1O15239 70 aa5.57□□□□□ -1.52
SFSWAP-202ENST00000535202 SCXQ7RTU7 201 aa5.57□□□□□ -1.52
SFSWAP-202ENST00000535202 LINC00528Q8N1L1 170 aa5.57□□□□□ -1.52
SFSWAP-202ENST00000535202 LINC00269Q8N2A0 174 aa5.57□□□□□ -1.52
SFSWAP-202ENST00000535202 C20orf203Q8NBC4 194 aa5.57□□□□□ -1.52
SFSWAP-202ENST00000535202 DEFB104AQ8WTQ1 72 aa5.57□□□□□ -1.52
SFSWAP-202ENST00000535202 DSCR8Q96T75 97 aa5.57□□□□□ -1.52
SFSWAP-202ENST00000535202 FAM236DA0A1B0GTK5 79 aa5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 DNAL4O96015 105 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms