RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 IGLV5-39A0A0G2JS06 123 aa12.05□□□□□ -0.48
PHRF1-206ENST00000534320 M0R2N4 97 aa12.05□□□□□ -0.48
PHRF1-206ENST00000534320 PCOTHQ58A44 107 aa12.05□□□□□ -0.48
PHRF1-206ENST00000534320 LINC01561Q8N1V8 128 aa12.04□□□□□ -0.48
PHRF1-206ENST00000534320 C6orf223Q8N319 242 aa12.04□□□□□ -0.48
PHRF1-206ENST00000534320 C10orf25Q5T742 122 aa12.03□□□□□ -0.48
PHRF1-206ENST00000534320 A0A096LNT2 108 aa12.01□□□□□ -0.49
PHRF1-206ENST00000534320 IGHV3OR16-9A0A0B4J2B5 98 aa12□□□□□ -0.49
PHRF1-206ENST00000534320 SPAG11AQ6PDA7 123 aa11.99□□□□□ -0.49
PHRF1-206ENST00000534320 X6R8D5 127 aa11.99□□□□□ -0.49
PHRF1-206ENST00000534320 HCG22E2RYF7 251 aa11.99□□□□□ -0.49
PHRF1-206ENST00000534320 IGLV5-45A0A087WSX0 123 aa11.97□□□□□ -0.49
PHRF1-206ENST00000534320 IGLV9-49A0A0B4J1Y8 123 aa11.97□□□□□ -0.49
PHRF1-206ENST00000534320 NUPR2A6NF83 97 aa11.96□□□□□ -0.49
PHRF1-206ENST00000534320 C2orf48Q96LS8 159 aa11.96□□□□□ -0.49
PHRF1-206ENST00000534320 MUC4Q99102 2169 aa11.96□□□□□ -0.49
PHRF1-206ENST00000534320 LINC00337Q8N6G1 96 aa11.96□□□□□ -0.49
PHRF1-206ENST00000534320 SMCPP49901 116 aaPredicted RBP11.95□□□□□ -0.5
PHRF1-206ENST00000534320 C7orf33Q8WU49 177 aa11.95□□□□□ -0.5
PHRF1-206ENST00000534320 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
PHRF1-206ENST00000534320 F8WDY8 70 aa11.94□□□□□ -0.5
PHRF1-206ENST00000534320 PRO0461Q9UI25 63 aa11.94□□□□□ -0.5
PHRF1-206ENST00000534320 C1orf64Q8NEQ6 169 aa11.93□□□□□ -0.5
PHRF1-206ENST00000534320 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
PHRF1-206ENST00000534320 PRUNE2Q8WUY3 3088 aa11.93□□□□□ -0.5
PHRF1-206ENST00000534320 IGHV6-1A0A0B4J1U7 121 aa11.92□□□□□ -0.5
PHRF1-206ENST00000534320 LY6G6CO95867 125 aa11.92□□□□□ -0.5
PHRF1-206ENST00000534320 UNC80Q8N2C7 3258 aa11.91□□□□□ -0.5
PHRF1-206ENST00000534320 Q6ZRU5 148 aa11.91□□□□□ -0.5
PHRF1-206ENST00000534320 C8orf87E5RJ46 101 aa11.9□□□□□ -0.5
PHRF1-206ENST00000534320 A0A087WSZ3 146 aa11.9□□□□□ -0.5
PHRF1-206ENST00000534320 A8MTW9 85 aa11.9□□□□□ -0.5
PHRF1-206ENST00000534320 A0A1B0GU69 56 aa11.89□□□□□ -0.51
PHRF1-206ENST00000534320 KRTAP24-1Q3LI83 254 aa11.89□□□□□ -0.51
PHRF1-206ENST00000534320 A0A0C4DFX4 3053 aa11.87□□□□□ -0.51
PHRF1-206ENST00000534320 SPINK1P00995 79 aa11.87□□□□□ -0.51
PHRF1-206ENST00000534320 REG3GQ6UW15 175 aa11.87□□□□□ -0.51
PHRF1-206ENST00000534320 SMIM29Q86T20 159 aa11.86□□□□□ -0.51
PHRF1-206ENST00000534320 SBSPONQ8IVN8 264 aa11.86□□□□□ -0.51
PHRF1-206ENST00000534320 LINC01556Q5JQF7 62 aa11.85□□□□□ -0.51
PHRF1-206ENST00000534320 HECTD1Q9ULT8 2610 aa11.85□□□□□ -0.51
PHRF1-206ENST00000534320 Q8NAQ8 132 aa11.85□□□□□ -0.51
PHRF1-206ENST00000534320 ZNF292O60281 2723 aa11.84□□□□□ -0.51
PHRF1-206ENST00000534320 F8P00451 2351 aa11.84□□□□□ -0.51
PHRF1-206ENST00000534320 H3BNG1 76 aa11.84□□□□□ -0.51
PHRF1-206ENST00000534320 Q9BRP9 147 aa11.83□□□□□ -0.52
PHRF1-206ENST00000534320 H3BPC8 53 aa11.81□□□□□ -0.52
PHRF1-206ENST00000534320 CSNK1G2-AS1Q8NCQ2 148 aa11.81□□□□□ -0.52
PHRF1-206ENST00000534320 SPATA3Q8NHX4 192 aa11.81□□□□□ -0.52
PHRF1-206ENST00000534320 FLNBO75369 2602 aaKnown RBP11.8□□□□□ -0.52
PHRF1-206ENST00000534320 CD164Q04900 197 aa11.8□□□□□ -0.52
PHRF1-206ENST00000534320 DEFB116Q30KQ4 102 aa11.8□□□□□ -0.52
PHRF1-206ENST00000534320 ACYP2P14621 99 aa11.79□□□□□ -0.52
PHRF1-206ENST00000534320 TP53AIP1Q9HCN2 124 aa11.79□□□□□ -0.52
PHRF1-206ENST00000534320 A0A1B0GW54 56 aa11.78□□□□□ -0.52
PHRF1-206ENST00000534320 C6orf48Q9UBA6 75 aa11.78□□□□□ -0.52
PHRF1-206ENST00000534320 CDH23Q9H251 3354 aa11.78□□□□□ -0.52
PHRF1-206ENST00000534320 ATP11AUNQ6ZP68 121 aa11.78□□□□□ -0.52
PHRF1-206ENST00000534320 MGAQ8IWI9 3026 aa11.78□□□□□ -0.52
PHRF1-206ENST00000534320 KRTAP1-3Q8IUG1 177 aa11.77□□□□□ -0.53
PHRF1-206ENST00000534320 NHLRC4P0CG21 123 aaPredicted RBP11.76□□□□□ -0.53
PHRF1-206ENST00000534320 LITAFQ99732 161 aa11.75□□□□□ -0.53
PHRF1-206ENST00000534320 CFAP54Q96N23 3096 aa11.75□□□□□ -0.53
PHRF1-206ENST00000534320 TRIOO75962 3097 aa11.75□□□□□ -0.53
PHRF1-206ENST00000534320 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
PHRF1-206ENST00000534320 CYP4F30PQ9H0H9 118 aa11.74□□□□□ -0.53
PHRF1-206ENST00000534320 CIRBP-AS1Q8TBR5 109 aa11.73□□□□□ -0.53
PHRF1-206ENST00000534320 FAM218AQ96MZ4 157 aa11.73□□□□□ -0.53
PHRF1-206ENST00000534320 C19orf73Q9NVV2 129 aa11.73□□□□□ -0.53
PHRF1-206ENST00000534320 C22orf24Q9Y442 160 aa11.73□□□□□ -0.53
PHRF1-206ENST00000534320 GIG44P09565 113 aaPredicted RBP11.73□□□□□ -0.53
PHRF1-206ENST00000534320 IGLV5-52A0A0A0MRZ9 124 aa11.72□□□□□ -0.53
PHRF1-206ENST00000534320 SPINT4Q6UDR6 99 aa11.71□□□□□ -0.53
PHRF1-206ENST00000534320 KRTAP10-3P60369 221 aa11.7□□□□□ -0.54
PHRF1-206ENST00000534320 FLNAP21333 2647 aaKnown RBP11.7□□□□□ -0.54
PHRF1-206ENST00000534320 TM2D3Q9BRN9 247 aa11.7□□□□□ -0.54
PHRF1-206ENST00000534320 WDFY4Q6ZS81 3184 aa11.69□□□□□ -0.54
PHRF1-206ENST00000534320 CENPEQ02224 2701 aa11.69□□□□□ -0.54
PHRF1-206ENST00000534320 LOC110117498A0A087WWA1 95 aa11.68□□□□□ -0.54
PHRF1-206ENST00000534320 C1orf134Q5TEV5 83 aa11.68□□□□□ -0.54
PHRF1-206ENST00000534320 Q6ZQT0 140 aa11.68□□□□□ -0.54
PHRF1-206ENST00000534320 ERC2-IT1O76042 136 aa11.67□□□□□ -0.54
PHRF1-206ENST00000534320 PRLHP81277 87 aa11.67□□□□□ -0.54
PHRF1-206ENST00000534320 KIAA0087Q14695 138 aa11.67□□□□□ -0.54
PHRF1-206ENST00000534320 A8MUN3 132 aa11.66□□□□□ -0.54
PHRF1-206ENST00000534320 KRTAP1-1Q07627 177 aa11.66□□□□□ -0.54
PHRF1-206ENST00000534320 MDFIQ99750 246 aa11.66□□□□□ -0.54
PHRF1-206ENST00000534320 XIRP2A4UGR9 3374 aa11.66□□□□□ -0.54
PHRF1-206ENST00000534320 LINC00336Q6ZUF6 198 aa11.65□□□□□ -0.54
PHRF1-206ENST00000534320 C7orf65Q6ZTY9 151 aa11.64□□□□□ -0.55
PHRF1-206ENST00000534320 LINC00167Q96N53 147 aa11.64□□□□□ -0.55
PHRF1-206ENST00000534320 LINC00588Q9Y4M8 146 aa11.64□□□□□ -0.55
PHRF1-206ENST00000534320 ITPR3Q14573 2671 aa11.64□□□□□ -0.55
PHRF1-206ENST00000534320 ZNF575Q86XF7 245 aa11.62□□□□□ -0.55
PHRF1-206ENST00000534320 IGKV2D-30A0A075B6S6 120 aa11.61□□□□□ -0.55
PHRF1-206ENST00000534320 TRAV22A0A0B4J277 110 aa11.61□□□□□ -0.55
PHRF1-206ENST00000534320 IGKV2-30P06310 120 aa11.61□□□□□ -0.55
PHRF1-206ENST00000534320 SMCR5Q8TEV8 140 aa11.61□□□□□ -0.55
PHRF1-206ENST00000534320 ELOF1P60002 83 aaKnown RBP11.61□□□□□ -0.55
PHRF1-206ENST00000534320 LINC00612Q8N6U2 182 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms