RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 C2CD3Q4AC94 2353 aa5.66□□□□□ -1.5
CTNND1-234ENST00000532844 BDP1A6H8Y1 2624 aa5.66□□□□□ -1.5
CTNND1-234ENST00000532844 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
CTNND1-234ENST00000532844 LINC00315P59091 139 aa5.65□□□□□ -1.5
CTNND1-234ENST00000532844 Q6ZRU5 148 aa5.65□□□□□ -1.5
CTNND1-234ENST00000532844 COL4A2P08572 1712 aa5.65□□□□□ -1.5
CTNND1-234ENST00000532844 CSPG4Q6UVK1 2322 aa5.65□□□□□ -1.5
CTNND1-234ENST00000532844 CUL9Q8IWT3 2517 aa5.65□□□□□ -1.51
CTNND1-234ENST00000532844 IGLV5-39A0A0G2JS06 123 aa5.65□□□□□ -1.51
CTNND1-234ENST00000532844 SMCPP49901 116 aaPredicted RBP5.65□□□□□ -1.51
CTNND1-234ENST00000532844 SMCR5Q8TEV8 140 aa5.65□□□□□ -1.51
CTNND1-234ENST00000532844 PRO0461Q9UI25 63 aa5.65□□□□□ -1.51
CTNND1-234ENST00000532844 SONP18583 2426 aaKnown RBP5.64□□□□□ -1.51
CTNND1-234ENST00000532844 KIAA0087Q14695 138 aa5.64□□□□□ -1.51
CTNND1-234ENST00000532844 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
CTNND1-234ENST00000532844 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
CTNND1-234ENST00000532844 APLNQ9ULZ1 77 aa5.62□□□□□ -1.51
CTNND1-234ENST00000532844 TM2D3Q9BRN9 247 aa5.62□□□□□ -1.51
CTNND1-234ENST00000532844 PTPRBP23467 1997 aa5.62□□□□□ -1.51
CTNND1-234ENST00000532844 FHL3Q13643 280 aa5.62□□□□□ -1.51
CTNND1-234ENST00000532844 COA5Q86WW8 74 aa5.62□□□□□ -1.51
CTNND1-234ENST00000532844 TYMSOSQ8TAI1 123 aa5.62□□□□□ -1.51
CTNND1-234ENST00000532844 COL27A1Q8IZC6 1860 aaPredicted RBP5.61□□□□□ -1.51
CTNND1-234ENST00000532844 ZNF462Q96JM2 2506 aa5.61□□□□□ -1.51
CTNND1-234ENST00000532844 RPL37AP61513 92 aaKnown RBP5.61□□□□□ -1.51
CTNND1-234ENST00000532844 AGRNO00468 2067 aa5.61□□□□□ -1.51
CTNND1-234ENST00000532844 IGHV3OR16-9A0A0B4J2B5 98 aa5.6□□□□□ -1.51
CTNND1-234ENST00000532844 ERC2-IT1O76042 136 aa5.6□□□□□ -1.51
CTNND1-234ENST00000532844 C22orf24Q9Y442 160 aa5.6□□□□□ -1.51
CTNND1-234ENST00000532844 LINC00336Q6ZUF6 198 aa5.59□□□□□ -1.51
CTNND1-234ENST00000532844 IGLV5-45A0A087WSX0 123 aa5.59□□□□□ -1.52
CTNND1-234ENST00000532844 LINC00313P59037 77 aa5.58□□□□□ -1.52
CTNND1-234ENST00000532844 MOBPQ13875 183 aa5.58□□□□□ -1.52
CTNND1-234ENST00000532844 FAM218AQ96MZ4 157 aa5.58□□□□□ -1.52
CTNND1-234ENST00000532844 ELOF1P60002 83 aaKnown RBP5.58□□□□□ -1.52
CTNND1-234ENST00000532844 HIVEP3Q5T1R4 2406 aa5.58□□□□□ -1.52
CTNND1-234ENST00000532844 C9orf129Q5T035 196 aaKnown RBP5.58□□□□□ -1.52
CTNND1-234ENST00000532844 EPM2AB3EWF7 344 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 Q8NBF4 154 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 PTPN13Q12923 2485 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 MYO18BQ8IUG5 2567 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 Q6ZQT0 140 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 RTL8CO15255 209 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 CACNA1AO00555 2505 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 NOTCH2Q04721 2471 aa5.57□□□□□ -1.52
CTNND1-234ENST00000532844 PCSK5Q92824 1860 aa5.56□□□□□ -1.52
CTNND1-234ENST00000532844 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
CTNND1-234ENST00000532844 Q6ZRP5 223 aa5.56□□□□□ -1.52
CTNND1-234ENST00000532844 NAV2Q8IVL1 2488 aa5.55□□□□□ -1.52
CTNND1-234ENST00000532844 PIEZO2Q9H5I5 2752 aa5.55□□□□□ -1.52
CTNND1-234ENST00000532844 Q96NJ1 140 aa5.54□□□□□ -1.52
CTNND1-234ENST00000532844 LINC00167Q96N53 147 aa5.54□□□□□ -1.52
CTNND1-234ENST00000532844 WDR87Q6ZQQ6 2873 aa5.54□□□□□ -1.52
CTNND1-234ENST00000532844 H3BS24 57 aa5.54□□□□□ -1.52
CTNND1-234ENST00000532844 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
CTNND1-234ENST00000532844 F8P00451 2351 aa5.53□□□□□ -1.52
CTNND1-234ENST00000532844 BPTFQ12830 3046 aa5.53□□□□□ -1.52
CTNND1-234ENST00000532844 TRBV7-4A0A0J9YYF1 115 aa5.53□□□□□ -1.52
CTNND1-234ENST00000532844 IGF2RP11717 2491 aa5.52□□□□□ -1.53
CTNND1-234ENST00000532844 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
CTNND1-234ENST00000532844 PRR15Q8IV56 129 aa5.51□□□□□ -1.53
CTNND1-234ENST00000532844 CSNK1G2-AS1Q8NCQ2 148 aa5.51□□□□□ -1.53
CTNND1-234ENST00000532844 KLK9Q2XQG4 91 aa5.51□□□□□ -1.53
CTNND1-234ENST00000532844 H3BNG1 76 aa5.5□□□□□ -1.53
CTNND1-234ENST00000532844 GOLGB1Q14789 3259 aaKnown RBP5.5□□□□□ -1.53
CTNND1-234ENST00000532844 A8MWP4 228 aa5.5□□□□□ -1.53
CTNND1-234ENST00000532844 LITAFQ99732 161 aa5.5□□□□□ -1.53
CTNND1-234ENST00000532844 MRPL34Q9BQ48 92 aaKnown RBP5.5□□□□□ -1.53
CTNND1-234ENST00000532844 NBDYA0A0U1RRE5 68 aa5.5□□□□□ -1.53
CTNND1-234ENST00000532844 KRTAP24-1Q3LI83 254 aa5.5□□□□□ -1.53
CTNND1-234ENST00000532844 CHTF8P0CG12 524 aa5.49□□□□□ -1.53
CTNND1-234ENST00000532844 KLKP1Q107X0 134 aa5.49□□□□□ -1.53
CTNND1-234ENST00000532844 M0R2T5 61 aa5.48□□□□□ -1.53
CTNND1-234ENST00000532844 Q8NAQ8 132 aa5.48□□□□□ -1.53
CTNND1-234ENST00000532844 Q6ZRX8 168 aa5.48□□□□□ -1.53
CTNND1-234ENST00000532844 PHF5AQ7RTV0 110 aaKnown RBP5.48□□□□□ -1.53
CTNND1-234ENST00000532844 RBM12B-AS1Q9P1G2 102 aa5.47□□□□□ -1.53
CTNND1-234ENST00000532844 NCOR2Q9Y618 2525 aa5.47□□□□□ -1.53
CTNND1-234ENST00000532844 CCDC168Q8NDH2 2452 aa5.47□□□□□ -1.53
CTNND1-234ENST00000532844 ST20-AS1Q8NBB2 130 aa5.47□□□□□ -1.53
CTNND1-234ENST00000532844 K7EQZ3 153 aa5.46□□□□□ -1.54
CTNND1-234ENST00000532844 Q1T7F1 81 aa5.46□□□□□ -1.54
CTNND1-234ENST00000532844 IGLV6-57P01721 117 aa5.45□□□□□ -1.54
CTNND1-234ENST00000532844 GVQW2A0A096LPI5 108 aaPredicted RBP5.45□□□□□ -1.54
CTNND1-234ENST00000532844 LINC00588Q9Y4M8 146 aa5.45□□□□□ -1.54
CTNND1-234ENST00000532844 ABCA2Q9BZC7 2435 aa5.43□□□□□ -1.54
CTNND1-234ENST00000532844 H7BZZ5 65 aa5.43□□□□□ -1.54
CTNND1-234ENST00000532844 IGLV5-37A0A075B6J1 123 aa5.42□□□□□ -1.54
CTNND1-234ENST00000532844 LINC00483Q53H64 154 aa5.42□□□□□ -1.54
CTNND1-234ENST00000532844 A0A0D9SG42 100 aa5.42□□□□□ -1.54
CTNND1-234ENST00000532844 FAM168BA1KXE4 195 aa5.42□□□□□ -1.54
CTNND1-234ENST00000532844 WIPF1O43516 503 aa5.42□□□□□ -1.54
CTNND1-234ENST00000532844 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
CTNND1-234ENST00000532844 TLN1Q9Y490 2541 aaKnown RBP5.41□□□□□ -1.54
CTNND1-234ENST00000532844 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
CTNND1-234ENST00000532844 CENPFP49454 3210 aa5.41□□□□□ -1.54
CTNND1-234ENST00000532844 C8orf17Q9NRJ1 99 aa5.4□□□□□ -1.54
CTNND1-234ENST00000532844 SMR3BP02814 79 aaPredicted RBP5.4□□□□□ -1.55
CTNND1-234ENST00000532844 FAM104AQ969W3 186 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms