RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	TET2	Q6N021	2002 aa	Predicted RBP	13.44	□□□□□ -0.26
FGFR1-238	ENST00000532791	IGLV5-45	A0A087WSX0	123 aa		13.43	□□□□□ -0.26
FGFR1-238	ENST00000532791	TP53AIP1	Q9HCN2	124 aa		13.42	□□□□□ -0.26
FGFR1-238	ENST00000532791	ELOF1	P60002	83 aa	Known RBP	13.42	□□□□□ -0.26
FGFR1-238	ENST00000532791	KRTAP24-1	Q3LI83	254 aa		13.41	□□□□□ -0.26
FGFR1-238	ENST00000532791	PHF5A	Q7RTV0	110 aa	Known RBP	13.41	□□□□□ -0.26
FGFR1-238	ENST00000532791	CDIP1	Q9H305	208 aa		13.4	□□□□□ -0.26
FGFR1-238	ENST00000532791	RTL8C	O15255	209 aa		13.38	□□□□□ -0.27
FGFR1-238	ENST00000532791	FAM218A	Q96MZ4	157 aa		13.37	□□□□□ -0.27
FGFR1-238	ENST00000532791	NBDY	A0A0U1RRE5	68 aa		13.36	□□□□□ -0.27
FGFR1-238	ENST00000532791		Q6ZRX8	168 aa		13.36	□□□□□ -0.27
FGFR1-238	ENST00000532791	MUC4	Q99102	2169 aa		13.35	□□□□□ -0.27
FGFR1-238	ENST00000532791		A0A1B0GU69	56 aa		13.35	□□□□□ -0.27
FGFR1-238	ENST00000532791		A0A1B0GW54	56 aa		13.35	□□□□□ -0.27
FGFR1-238	ENST00000532791	FAM229A	H3BQW9	127 aa		13.35	□□□□□ -0.27
FGFR1-238	ENST00000532791	LINC00476	Q8WZB0	136 aa		13.35	□□□□□ -0.27
FGFR1-238	ENST00000532791		Q8NBF4	154 aa		13.34	□□□□□ -0.27
FGFR1-238	ENST00000532791	EPM2A	B3EWF7	344 aa		13.34	□□□□□ -0.27
FGFR1-238	ENST00000532791	ACYP2	P14621	99 aa		13.34	□□□□□ -0.27
FGFR1-238	ENST00000532791		Q6ZRP5	223 aa		13.33	□□□□□ -0.28
FGFR1-238	ENST00000532791	C16orf90	A8MZG2	172 aa		13.32	□□□□□ -0.28
FGFR1-238	ENST00000532791	LINC00588	Q9Y4M8	146 aa		13.32	□□□□□ -0.28
FGFR1-238	ENST00000532791		Q8NAQ8	132 aa		13.32	□□□□□ -0.28
FGFR1-238	ENST00000532791	CHTF8	P0CG12	524 aa		13.32	□□□□□ -0.28
FGFR1-238	ENST00000532791	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.32	□□□□□ -0.28
FGFR1-238	ENST00000532791	WDR87	Q6ZQQ6	2873 aa		13.32	□□□□□ -0.28
FGFR1-238	ENST00000532791	TYMSOS	Q8TAI1	123 aa		13.3	□□□□□ -0.28
FGFR1-238	ENST00000532791	SMCP	P49901	116 aa	Predicted RBP	13.3	□□□□□ -0.28
FGFR1-238	ENST00000532791		Q6ZQT0	140 aa		13.3	□□□□□ -0.28
FGFR1-238	ENST00000532791	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.29	□□□□□ -0.28
FGFR1-238	ENST00000532791	ST20-AS1	Q8NBB2	130 aa		13.29	□□□□□ -0.28
FGFR1-238	ENST00000532791	CEP295	Q9C0D2	2601 aa		13.28	□□□□□ -0.28
FGFR1-238	ENST00000532791	LINC00313	P59037	77 aa		13.28	□□□□□ -0.28
FGFR1-238	ENST00000532791	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.27	□□□□□ -0.29
FGFR1-238	ENST00000532791	BCE1	O60756	84 aa		13.27	□□□□□ -0.29
FGFR1-238	ENST00000532791	LOC110117498	A0A087WWA1	95 aa		13.27	□□□□□ -0.29
FGFR1-238	ENST00000532791	COL4A2	P08572	1712 aa		13.26	□□□□□ -0.29
FGFR1-238	ENST00000532791	PTPRB	P23467	1997 aa		13.25	□□□□□ -0.29
FGFR1-238	ENST00000532791	USP9Y	O00507	2555 aa	Predicted RBP	13.25	□□□□□ -0.29
FGFR1-238	ENST00000532791	PKD1L2	Q7Z442	2459 aa		13.22	□□□□□ -0.29
FGFR1-238	ENST00000532791		H3BPC8	53 aa		13.22	□□□□□ -0.29
FGFR1-238	ENST00000532791	TRAV22	A0A0B4J277	110 aa		13.21	□□□□□ -0.3
FGFR1-238	ENST00000532791	SPAG11A	Q6PDA7	123 aa		13.21	□□□□□ -0.3
FGFR1-238	ENST00000532791	RPL37A	P61513	92 aa	Known RBP	13.2	□□□□□ -0.3
FGFR1-238	ENST00000532791	PRO0461	Q9UI25	63 aa		13.2	□□□□□ -0.3
FGFR1-238	ENST00000532791	CHD8	Q9HCK8	2581 aa		13.19	□□□□□ -0.3
FGFR1-238	ENST00000532791	ZNF462	Q96JM2	2506 aa		13.19	□□□□□ -0.3
FGFR1-238	ENST00000532791	WWC2-AS2	Q96NR7	200 aa		13.17	□□□□□ -0.3
FGFR1-238	ENST00000532791	DNAH10OS	P0CZ25	163 aa		13.17	□□□□□ -0.3
FGFR1-238	ENST00000532791	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.17	□□□□□ -0.3
FGFR1-238	ENST00000532791		Q96NJ1	140 aa		13.17	□□□□□ -0.3
FGFR1-238	ENST00000532791	VPREB1	P12018	145 aa		13.14	□□□□□ -0.31
FGFR1-238	ENST00000532791	FAM168B	A1KXE4	195 aa		13.13	□□□□□ -0.31
FGFR1-238	ENST00000532791	KLK9	Q2XQG4	91 aa		13.12	□□□□□ -0.31
FGFR1-238	ENST00000532791	ATP11AUN	Q6ZP68	121 aa		13.12	□□□□□ -0.31
FGFR1-238	ENST00000532791	TRBV7-4	A0A0J9YYF1	115 aa		13.12	□□□□□ -0.31
FGFR1-238	ENST00000532791	TM2D3	Q9BRN9	247 aa		13.12	□□□□□ -0.31
FGFR1-238	ENST00000532791	SRCAP	Q6ZRS2	3230 aa		13.11	□□□□□ -0.31
FGFR1-238	ENST00000532791	IGLV6-57	P01721	117 aa		13.11	□□□□□ -0.31
FGFR1-238	ENST00000532791	PLA2G1B	P04054	148 aa	Known RBP	13.11	□□□□□ -0.31
FGFR1-238	ENST00000532791	PRO0628	Q9UI54	55 aa		13.1	□□□□□ -0.31
FGFR1-238	ENST00000532791	LITAF	Q99732	161 aa		13.1	□□□□□ -0.31
FGFR1-238	ENST00000532791	MTOR	P42345	2549 aa		13.08	□□□□□ -0.31
FGFR1-238	ENST00000532791	C8orf87	E5RJ46	101 aa		13.08	□□□□□ -0.32
FGFR1-238	ENST00000532791	SERTAD4-AS1	Q5TG53	156 aa		13.07	□□□□□ -0.32
FGFR1-238	ENST00000532791	LOC101927531	A0A1B0GV80	90 aa		13.07	□□□□□ -0.32
FGFR1-238	ENST00000532791		A8MWP4	228 aa		13.07	□□□□□ -0.32
FGFR1-238	ENST00000532791	IGLV8-61	A0A075B6I0	122 aa		13.07	□□□□□ -0.32
FGFR1-238	ENST00000532791	IGLV1-50	A0A075B6I6	118 aa		13.05	□□□□□ -0.32
FGFR1-238	ENST00000532791	SPTBN4	Q9H254	2564 aa		13.05	□□□□□ -0.32
FGFR1-238	ENST00000532791		J3QL48	77 aa		13.04	□□□□□ -0.32
FGFR1-238	ENST00000532791	CSNK1G2-AS1	Q8NCQ2	148 aa		13.03	□□□□□ -0.32
FGFR1-238	ENST00000532791	MRPL34	Q9BQ48	92 aa	Known RBP	13.03	□□□□□ -0.32
FGFR1-238	ENST00000532791		K7EQZ3	153 aa		13.02	□□□□□ -0.33
FGFR1-238	ENST00000532791	C4orf26	Q17RF5	130 aa		13.01	□□□□□ -0.33
FGFR1-238	ENST00000532791	KCNQ1DN	Q9H478	68 aa		13	□□□□□ -0.33
FGFR1-238	ENST00000532791	RPS28	P62857	69 aa	Known RBP	13	□□□□□ -0.33
FGFR1-238	ENST00000532791	KRTAP10-11	P60412	298 aa		12.98	□□□□□ -0.33
FGFR1-238	ENST00000532791		K7EIL1	84 aa		12.97	□□□□□ -0.33
FGFR1-238	ENST00000532791	LINC00528	Q8N1L1	170 aa		12.95	□□□□□ -0.34
FGFR1-238	ENST00000532791	ANKRD17	O75179	2603 aa	Known RBP	12.95	□□□□□ -0.34
FGFR1-238	ENST00000532791	POLQ	O75417	2590 aa		12.95	□□□□□ -0.34
FGFR1-238	ENST00000532791	IGFL1	Q6UW32	110 aa		12.93	□□□□□ -0.34
FGFR1-238	ENST00000532791	FASN	P49327	2511 aa	Known RBP	12.93	□□□□□ -0.34
FGFR1-238	ENST00000532791	C15orf56	Q8N910	161 aa		12.92	□□□□□ -0.34
FGFR1-238	ENST00000532791	PRR34	Q9NV39	138 aa		12.91	□□□□□ -0.34
FGFR1-238	ENST00000532791	C19orf73	Q9NVV2	129 aa		12.91	□□□□□ -0.34
FGFR1-238	ENST00000532791	DSCR10	P59022	87 aa		12.91	□□□□□ -0.34
FGFR1-238	ENST00000532791	EP400	Q96L91	3159 aa		12.9	□□□□□ -0.34
FGFR1-238	ENST00000532791	COX6B2	Q6YFQ2	88 aa		12.9	□□□□□ -0.34
FGFR1-238	ENST00000532791	LINC01600	Q96MT4	127 aa		12.9	□□□□□ -0.34
FGFR1-238	ENST00000532791	COA5	Q86WW8	74 aa		12.89	□□□□□ -0.35
FGFR1-238	ENST00000532791	LINC00304	Q8N9R0	145 aa		12.89	□□□□□ -0.35
FGFR1-238	ENST00000532791	ACAN	P16112	2415 aa		12.89	□□□□□ -0.35
FGFR1-238	ENST00000532791	F8	P00451	2351 aa		12.88	□□□□□ -0.35
FGFR1-238	ENST00000532791	ZNF861P	O60384	105 aa		12.88	□□□□□ -0.35
FGFR1-238	ENST00000532791	ERC2-IT1	O76042	136 aa		12.88	□□□□□ -0.35
FGFR1-238	ENST00000532791	C8orf17	Q9NRJ1	99 aa		12.88	□□□□□ -0.35
FGFR1-238	ENST00000532791	SSBP3-AS1	Q7Z2R9	100 aa		12.86	□□□□□ -0.35
FGFR1-238	ENST00000532791	C9orf129	Q5T035	196 aa	Known RBP	12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms