RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 Q6ZRP5 223 aa14.2□□□□□ -0.14
PACSIN3-209ENST00000532457 ARL17AQ8IVW1 177 aa14.2□□□□□ -0.14
PACSIN3-209ENST00000532457 Q8NDZ9 215 aa14.2□□□□□ -0.14
PACSIN3-209ENST00000532457 NDUFC2-KCTD14E9PQ53 114 aa14.19□□□□□ -0.14
PACSIN3-209ENST00000532457 CNBPP62633 177 aaKnown RBP14.19□□□□□ -0.14
PACSIN3-209ENST00000532457 C14orf177Q52M58 125 aa14.19□□□□□ -0.14
PACSIN3-209ENST00000532457 H3BUT2 72 aa14.18□□□□□ -0.14
PACSIN3-209ENST00000532457 PPDPFQ9H3Y8 114 aa14.18□□□□□ -0.14
PACSIN3-209ENST00000532457 XAGE1AQ9HD64 81 aa14.18□□□□□ -0.14
PACSIN3-209ENST00000532457 Q8N814 137 aa14.18□□□□□ -0.14
PACSIN3-209ENST00000532457 UBE2V1Q13404 147 aa14.17□□□□□ -0.14
PACSIN3-209ENST00000532457 PRR3P79522 188 aaKnown RBP14.16□□□□□ -0.14
PACSIN3-209ENST00000532457 GAGE2EQ4V326 116 aa14.16□□□□□ -0.14
PACSIN3-209ENST00000532457 GAGE2DQ9UEU5 116 aa14.16□□□□□ -0.14
PACSIN3-209ENST00000532457 HECTD4Q9Y4D8 3996 aa14.16□□□□□ -0.14
PACSIN3-209ENST00000532457 IGKV2-28A0A075B6P5 120 aa14.15□□□□□ -0.14
PACSIN3-209ENST00000532457 IGKV2D-28P01615 120 aa14.15□□□□□ -0.14
PACSIN3-209ENST00000532457 TLX1NBP0CAT3 122 aa14.15□□□□□ -0.14
PACSIN3-209ENST00000532457 FUSP35637 526 aaKnown RBP eCLIP14.15□□□□□ -0.14
PACSIN3-209ENST00000532457 COPS9Q8WXC6 57 aa14.15□□□□□ -0.14
PACSIN3-209ENST00000532457 NAA38Q9BRA0 125 aaKnown RBP14.14□□□□□ -0.15
PACSIN3-209ENST00000532457 PKD1P98161 4303 aa14.13□□□□□ -0.15
PACSIN3-209ENST00000532457 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.13□□□□□ -0.15
PACSIN3-209ENST00000532457 A0A1W2PPM0 123 aa14.13□□□□□ -0.15
PACSIN3-209ENST00000532457 C9orf129Q5T035 196 aaKnown RBP14.13□□□□□ -0.15
PACSIN3-209ENST00000532457 A0A0B4J2C4 111 aa14.12□□□□□ -0.15
PACSIN3-209ENST00000532457 LINC01620Q4KN68 170 aa14.12□□□□□ -0.15
PACSIN3-209ENST00000532457 RPL18AQ02543 176 aaKnown RBP14.11□□□□□ -0.15
PACSIN3-209ENST00000532457 PRO1854Q9UHT4 67 aa14.11□□□□□ -0.15
PACSIN3-209ENST00000532457 DNAH11Q96DT5 4516 aa14.1□□□□□ -0.15
PACSIN3-209ENST00000532457 LINC00337Q8N6G1 96 aa14.09□□□□□ -0.15
PACSIN3-209ENST00000532457 C9orf163Q8N9P6 203 aa14.09□□□□□ -0.15
PACSIN3-209ENST00000532457 LOC107984640A0A0U1RRK4 108 aa14.08□□□□□ -0.15
PACSIN3-209ENST00000532457 FABP2P12104 132 aa14.08□□□□□ -0.15
PACSIN3-209ENST00000532457 A0A1B0GVY2 172 aa14.08□□□□□ -0.16
PACSIN3-209ENST00000532457 GAGE2BQ13066 116 aa14.08□□□□□ -0.16
PACSIN3-209ENST00000532457 GAGE10A6NGK3 116 aa14.07□□□□□ -0.16
PACSIN3-209ENST00000532457 PGPEP1Q9NXJ5 209 aa14.07□□□□□ -0.16
PACSIN3-209ENST00000532457 NDUFC2O95298 119 aa14.06□□□□□ -0.16
PACSIN3-209ENST00000532457 GTF2H5Q6ZYL4 71 aa14.06□□□□□ -0.16
PACSIN3-209ENST00000532457 K7EP34 96 aa14.06□□□□□ -0.16
PACSIN3-209ENST00000532457 TSPAN13O95857 204 aa14.06□□□□□ -0.16
PACSIN3-209ENST00000532457 H7C2G1 150 aa14.05□□□□□ -0.16
PACSIN3-209ENST00000532457 SDIM1Q6ZPB5 146 aa14.05□□□□□ -0.16
PACSIN3-209ENST00000532457 A0A096LNI7 61 aa14.04□□□□□ -0.16
PACSIN3-209ENST00000532457 SPCS1Q9Y6A9 102 aa14.04□□□□□ -0.16
PACSIN3-209ENST00000532457 FAM168BA1KXE4 195 aa14.04□□□□□ -0.16
PACSIN3-209ENST00000532457 NCR3O14931 201 aa14.04□□□□□ -0.16
PACSIN3-209ENST00000532457 VPREB1P12018 145 aa14.04□□□□□ -0.16
PACSIN3-209ENST00000532457 KRTAP7-1Q8IUC3 87 aa14.04□□□□□ -0.16
PACSIN3-209ENST00000532457 RPL13AP40429 203 aaKnown RBP14.03□□□□□ -0.16
PACSIN3-209ENST00000532457 SERTAD4-AS1Q5TG53 156 aa14.03□□□□□ -0.16
PACSIN3-209ENST00000532457 PKHD1P08F94 4074 aa14.02□□□□□ -0.17
PACSIN3-209ENST00000532457 KRTAP10-2P60368 255 aa14.01□□□□□ -0.17
PACSIN3-209ENST00000532457 IGLV5-52A0A0A0MRZ9 124 aa14□□□□□ -0.17
PACSIN3-209ENST00000532457 C16orf90A8MZG2 172 aa14□□□□□ -0.17
PACSIN3-209ENST00000532457 CHTF8P0CG12 524 aa14□□□□□ -0.17
PACSIN3-209ENST00000532457 TRAV13-2A0A0B4J235 113 aa13.99□□□□□ -0.17
PACSIN3-209ENST00000532457 IGKV2-24A0A0C4DH68 120 aa13.99□□□□□ -0.17
PACSIN3-209ENST00000532457 PANO1I0J062 215 aa13.98□□□□□ -0.17
PACSIN3-209ENST00000532457 OR13C6PQ8NH95 151 aa13.97□□□□□ -0.17
PACSIN3-209ENST00000532457 EPPK1P58107 5090 aaKnown RBP13.97□□□□□ -0.17
PACSIN3-209ENST00000532457 DNAH5Q8TE73 4624 aa13.97□□□□□ -0.17
PACSIN3-209ENST00000532457 PLA2G2DQ9UNK4 145 aa13.97□□□□□ -0.17
PACSIN3-209ENST00000532457 A0A1W2PNN7 141 aa13.95□□□□□ -0.18
PACSIN3-209ENST00000532457 TRBV10-2A0A0K0K1G8 114 aa13.94□□□□□ -0.18
PACSIN3-209ENST00000532457 Q1RN00 199 aa13.94□□□□□ -0.18
PACSIN3-209ENST00000532457 SMIM11BQ8TCY0 68 aa13.93□□□□□ -0.18
PACSIN3-209ENST00000532457 TRIAP1O43715 76 aa13.92□□□□□ -0.18
PACSIN3-209ENST00000532457 IGLV6-57P01721 117 aa13.92□□□□□ -0.18
PACSIN3-209ENST00000532457 FAM19A5Q7Z5A7 132 aaPredicted RBP13.92□□□□□ -0.18
PACSIN3-209ENST00000532457 M0R378 163 aa13.92□□□□□ -0.18
PACSIN3-209ENST00000532457 LYRM7Q5U5X0 104 aa13.92□□□□□ -0.18
PACSIN3-209ENST00000532457 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.92□□□□□ -0.18
PACSIN3-209ENST00000532457 IGLV5-37A0A075B6J1 123 aa13.91□□□□□ -0.18
PACSIN3-209ENST00000532457 TRBV10-3A0A0K0K1G6 114 aa13.91□□□□□ -0.18
PACSIN3-209ENST00000532457 TMEM126AQ9H061 195 aa13.91□□□□□ -0.18
PACSIN3-209ENST00000532457 C22orf24Q9Y442 160 aa13.91□□□□□ -0.18
PACSIN3-209ENST00000532457 S100A7L2Q5SY68 101 aa13.9□□□□□ -0.18
PACSIN3-209ENST00000532457 PSMB2P49721 201 aa13.9□□□□□ -0.18
PACSIN3-209ENST00000532457 C7orf33Q8WU49 177 aa13.9□□□□□ -0.18
PACSIN3-209ENST00000532457 RPL28P46779 137 aaKnown RBP13.88□□□□□ -0.19
PACSIN3-209ENST00000532457 NKAPP1Q8N9T2 125 aa13.87□□□□□ -0.19
PACSIN3-209ENST00000532457 SPACA4Q8TDM5 124 aa13.86□□□□□ -0.19
PACSIN3-209ENST00000532457 DYNC1H1Q14204 4646 aaKnown RBP13.86□□□□□ -0.19
PACSIN3-209ENST00000532457 H3BMG7 143 aa13.85□□□□□ -0.19
PACSIN3-209ENST00000532457 LINC00167Q96N53 147 aa13.85□□□□□ -0.19
PACSIN3-209ENST00000532457 PKIGQ9Y2B9 76 aa13.85□□□□□ -0.19
PACSIN3-209ENST00000532457 SCGB1C2P0DMR2 95 aa13.85□□□□□ -0.19
PACSIN3-209ENST00000532457 LRP1BQ9NZR2 4599 aa13.84□□□□□ -0.19
PACSIN3-209ENST00000532457 RPL37AP8A6NKH3 93 aa13.84□□□□□ -0.19
PACSIN3-209ENST00000532457 TRBV20-1A0A075B6N2 111 aa13.83□□□□□ -0.2
PACSIN3-209ENST00000532457 LINC00474Q9P2X8 69 aa13.83□□□□□ -0.2
PACSIN3-209ENST00000532457 MRPL55Q7Z7F7 128 aaKnown RBP13.83□□□□□ -0.2
PACSIN3-209ENST00000532457 DPH3Q96FX2 82 aa13.82□□□□□ -0.2
PACSIN3-209ENST00000532457 M0QXV9 152 aa13.81□□□□□ -0.2
PACSIN3-209ENST00000532457 TCL1BO95988 128 aa13.81□□□□□ -0.2
PACSIN3-209ENST00000532457 CLEC2BQ92478 149 aa13.81□□□□□ -0.2
PACSIN3-209ENST00000532457 IGLV1-50A0A075B6I6 118 aa13.8□□□□□ -0.2
PACSIN3-209ENST00000532457 F8W1H4 67 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms