RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 HIST2H2BEQ16778 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BHQ93079 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BNQ99877 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 HIST1H2BMQ99879 126 aa9.81□□□□□ -0.84
LTBP3-211ENST00000528966 SPINK1P00995 79 aa9.8□□□□□ -0.84
LTBP3-211ENST00000528966 S100A6P06703 90 aa9.8□□□□□ -0.84
LTBP3-211ENST00000528966 HIGD2AQ9BW72 106 aa9.8□□□□□ -0.84
LTBP3-211ENST00000528966 CYSLTR1Q9Y271 337 aa9.8□□□□□ -0.84
LTBP3-211ENST00000528966 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
LTBP3-211ENST00000528966 ORMDL3Q8N138 153 aa9.79□□□□□ -0.84
LTBP3-211ENST00000528966 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
LTBP3-211ENST00000528966 PRELID3AQ96N28 172 aa9.78□□□□□ -0.84
LTBP3-211ENST00000528966 VPREB1P12018 145 aa9.77□□□□□ -0.85
LTBP3-211ENST00000528966 SEC11AP67812 179 aa9.77□□□□□ -0.85
LTBP3-211ENST00000528966 COA6Q5JTJ3 125 aaKnown RBP9.77□□□□□ -0.85
LTBP3-211ENST00000528966 COX7B2Q8TF08 81 aa9.77□□□□□ -0.85
LTBP3-211ENST00000528966 GEMIN7Q9H840 131 aaKnown RBP9.77□□□□□ -0.85
LTBP3-211ENST00000528966 NDUFA12Q9UI09 145 aa9.77□□□□□ -0.85
LTBP3-211ENST00000528966 LOC389332A0A1B0GUA5 103 aa9.76□□□□□ -0.85
LTBP3-211ENST00000528966 C5orf52A6NGY3 159 aa9.76□□□□□ -0.85
LTBP3-211ENST00000528966 NPSP0C0P6 89 aa9.76□□□□□ -0.85
LTBP3-211ENST00000528966 Q8N377 158 aa9.76□□□□□ -0.85
LTBP3-211ENST00000528966 PRSS47A8MTI9 375 aa9.75□□□□□ -0.85
LTBP3-211ENST00000528966 NDUFA6P56556 154 aa9.75□□□□□ -0.85
LTBP3-211ENST00000528966 PDZD11Q5EBL8 140 aa9.74□□□□□ -0.85
LTBP3-211ENST00000528966 FLGP20930 4061 aaPredicted RBP9.74□□□□□ -0.85
LTBP3-211ENST00000528966 SNRPEP62304 92 aaKnown RBP9.73□□□□□ -0.85
LTBP3-211ENST00000528966 Q8NDZ9 215 aa9.73□□□□□ -0.85
LTBP3-211ENST00000528966 LOC105371267A0A1B0GV96 52 aa9.72□□□□□ -0.85
LTBP3-211ENST00000528966 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
LTBP3-211ENST00000528966 FAM19A2Q8N3H0 131 aa9.72□□□□□ -0.85
LTBP3-211ENST00000528966 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.86
LTBP3-211ENST00000528966 M0R2T5 61 aa9.71□□□□□ -0.86
LTBP3-211ENST00000528966 PCOTHQ58A44 107 aa9.71□□□□□ -0.86
LTBP3-211ENST00000528966 Q8N8P6 123 aa9.71□□□□□ -0.86
LTBP3-211ENST00000528966 MAP1LC3AQ9H492 121 aa9.71□□□□□ -0.86
LTBP3-211ENST00000528966 ZNF706Q9Y5V0 76 aaPredicted RBP9.71□□□□□ -0.86
LTBP3-211ENST00000528966 RPS29P62273 56 aaKnown RBP9.7□□□□□ -0.86
LTBP3-211ENST00000528966 LAMTOR2Q9Y2Q5 125 aa9.7□□□□□ -0.86
LTBP3-211ENST00000528966 PFN2P35080 140 aa9.69□□□□□ -0.86
LTBP3-211ENST00000528966 BAGE3Q86Y29 109 aa9.69□□□□□ -0.86
LTBP3-211ENST00000528966 C18orf32Q8TCD1 76 aa9.69□□□□□ -0.86
LTBP3-211ENST00000528966 SND1-IT1Q9HBX3 110 aa9.69□□□□□ -0.86
LTBP3-211ENST00000528966 IGLV5-45A0A087WSX0 123 aa9.68□□□□□ -0.86
LTBP3-211ENST00000528966 ORMDL2Q53FV1 153 aa9.68□□□□□ -0.86
LTBP3-211ENST00000528966 PAPPA-AS1Q5QFB9 102 aa9.68□□□□□ -0.86
LTBP3-211ENST00000528966 HIST3H2BBQ8N257 126 aa9.68□□□□□ -0.86
LTBP3-211ENST00000528966 SLC25A20O43772 301 aa9.67□□□□□ -0.86
LTBP3-211ENST00000528966 SPINK8P0C7L1 97 aa9.67□□□□□ -0.86
LTBP3-211ENST00000528966 RPL24P83731 157 aaKnown RBP9.67□□□□□ -0.86
LTBP3-211ENST00000528966 SSPOA2VEC9 5147 aa9.67□□□□□ -0.86
LTBP3-211ENST00000528966 TINCRA0A1B0GVN0 87 aa9.66□□□□□ -0.86
LTBP3-211ENST00000528966 ATP5LO75964 103 aa9.66□□□□□ -0.86
LTBP3-211ENST00000528966 S100A2P29034 98 aa9.66□□□□□ -0.86
LTBP3-211ENST00000528966 TIMM17AQ99595 171 aa9.66□□□□□ -0.86
LTBP3-211ENST00000528966 SERF1AO75920 110 aa9.65□□□□□ -0.86
LTBP3-211ENST00000528966 CHCHD1Q96BP2 118 aaKnown RBP9.65□□□□□ -0.86
LTBP3-211ENST00000528966 LINC00483Q53H64 154 aa9.64□□□□□ -0.87
LTBP3-211ENST00000528966 K7EMI3 77 aa9.63□□□□□ -0.87
LTBP3-211ENST00000528966 LINC00310P59036 64 aa9.63□□□□□ -0.87
LTBP3-211ENST00000528966 MOBPQ13875 183 aa9.63□□□□□ -0.87
LTBP3-211ENST00000528966 SMCR5Q8TEV8 140 aa9.62□□□□□ -0.87
LTBP3-211ENST00000528966 TOMM6Q96B49 74 aa9.62□□□□□ -0.87
LTBP3-211ENST00000528966 USH2AO75445 5202 aa9.61□□□□□ -0.87
LTBP3-211ENST00000528966 HSBP1O75506 76 aa9.61□□□□□ -0.87
LTBP3-211ENST00000528966 LINC00614P0C842 121 aa9.61□□□□□ -0.87
LTBP3-211ENST00000528966 HIST1H2BLQ99880 126 aa9.61□□□□□ -0.87
LTBP3-211ENST00000528966 NXT2Q9NPJ8 142 aaKnown RBP9.61□□□□□ -0.87
LTBP3-211ENST00000528966 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
LTBP3-211ENST00000528966 IGLV9-49A0A0B4J1Y8 123 aa9.6□□□□□ -0.87
LTBP3-211ENST00000528966 FA2HQ7L5A8 372 aa9.6□□□□□ -0.87
LTBP3-211ENST00000528966 LINC01546A6NGU7 62 aa9.59□□□□□ -0.87
LTBP3-211ENST00000528966 FABP4P15090 132 aa9.59□□□□□ -0.87
LTBP3-211ENST00000528966 AKR1D1P51857 326 aa9.59□□□□□ -0.87
LTBP3-211ENST00000528966 SSBP3-AS1Q7Z2R9 100 aa9.59□□□□□ -0.87
LTBP3-211ENST00000528966 ERASQ7Z444 233 aa9.59□□□□□ -0.87
LTBP3-211ENST00000528966 URB1-AS1Q96HZ7 61 aa9.59□□□□□ -0.87
LTBP3-211ENST00000528966 GAGE2AQ6NT46 116 aa9.57□□□□□ -0.88
LTBP3-211ENST00000528966 SCGB3A1Q96QR1 104 aa9.57□□□□□ -0.88
LTBP3-211ENST00000528966 IGLV5-39A0A0G2JS06 123 aa9.56□□□□□ -0.88
LTBP3-211ENST00000528966 G0S2P27469 103 aa9.56□□□□□ -0.88
LTBP3-211ENST00000528966 COX17Q14061 63 aa9.56□□□□□ -0.88
LTBP3-211ENST00000528966 CST9LQ9H4G1 147 aa9.56□□□□□ -0.88
LTBP3-211ENST00000528966 KRTAP4-16G5E9R7 235 aaPredicted RBP9.55□□□□□ -0.88
LTBP3-211ENST00000528966 SPRR1AP35321 89 aa9.55□□□□□ -0.88
LTBP3-211ENST00000528966 ZNF625Q96I27 306 aaPredicted RBP9.55□□□□□ -0.88
LTBP3-211ENST00000528966 FCGBPQ9Y6R7 5405 aaPredicted RBP9.55□□□□□ -0.88
LTBP3-211ENST00000528966 PRYO14603 147 aa9.54□□□□□ -0.88
LTBP3-211ENST00000528966 COX6B2Q6YFQ2 88 aa9.54□□□□□ -0.88
LTBP3-211ENST00000528966 C9orf92A6NGG3 77 aa9.53□□□□□ -0.88
LTBP3-211ENST00000528966 SMIM6P0DI80 62 aa9.53□□□□□ -0.88
LTBP3-211ENST00000528966 H3BRM9 83 aa9.52□□□□□ -0.89
LTBP3-211ENST00000528966 HBDP02042 147 aa9.52□□□□□ -0.89
LTBP3-211ENST00000528966 HSPB8Q9UJY1 196 aa9.52□□□□□ -0.89
LTBP3-211ENST00000528966 ERC2-IT1O76042 136 aa9.51□□□□□ -0.89
LTBP3-211ENST00000528966 LEPROTL1O95214 131 aa9.51□□□□□ -0.89
LTBP3-211ENST00000528966 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
LTBP3-211ENST00000528966 JOSD1Q15040 202 aaPredicted RBP9.5□□□□□ -0.89
LTBP3-211ENST00000528966 KCNQ1DNQ9H478 68 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms