RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 IGHV3-49A0A0A0MS15 119 aa2.39□□□□□ -2.03
PTPN22-207ENST00000528414 F8VRH5 84 aa2.39□□□□□ -2.03
PTPN22-207ENST00000528414 M0R1W7 72 aa2.39□□□□□ -2.03
PTPN22-207ENST00000528414 IGKV1-17P01599 117 aa2.39□□□□□ -2.03
PTPN22-207ENST00000528414 DNAH10OSP0CZ25 163 aa2.39□□□□□ -2.03
PTPN22-207ENST00000528414 SPINK14Q6IE38 97 aa2.39□□□□□ -2.03
PTPN22-207ENST00000528414 FN1P02751 2386 aaKnown RBP2.39□□□□□ -2.03
PTPN22-207ENST00000528414 TEP1Q99973 2627 aaKnown RBP2.38□□□□□ -2.03
PTPN22-207ENST00000528414 FLNCQ14315 2725 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 TRBV6-5A0A0K0K1A5 114 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 SAA2P0DJI9 122 aaPredicted RBP2.38□□□□□ -2.03
PTPN22-207ENST00000528414 Q1RN00 199 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 ZCCHC13Q8WW36 166 aaKnown RBP2.38□□□□□ -2.03
PTPN22-207ENST00000528414 LINC00467Q9BRT7 94 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 EPPK1P58107 5090 aaKnown RBP2.38□□□□□ -2.03
PTPN22-207ENST00000528414 A6NDX4 124 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 CPSF4LA6NMK7 179 aaKnown RBP2.38□□□□□ -2.03
PTPN22-207ENST00000528414 KRTAP10-3P60369 221 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 KRTAP26-1Q6PEX3 210 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 Q8N9W7 124 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 DEFB108BQ8NET1 73 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 RPP21Q9H633 154 aaKnown RBP2.38□□□□□ -2.03
PTPN22-207ENST00000528414 DPM3Q9P2X0 92 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 BOD1L1Q8NFC6 3051 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 NDUFA3O95167 84 aa2.38□□□□□ -2.03
PTPN22-207ENST00000528414 ASPMQ8IZT6 3477 aa2.37□□□□□ -2.03
PTPN22-207ENST00000528414 A0A087WSZ3 146 aa2.37□□□□□ -2.03
PTPN22-207ENST00000528414 A0A087WW49 117 aa2.37□□□□□ -2.03
PTPN22-207ENST00000528414 M0R3E3 92 aa2.37□□□□□ -2.03
PTPN22-207ENST00000528414 PROP1O75360 226 aa2.37□□□□□ -2.03
PTPN22-207ENST00000528414 KLHL30-AS1Q8NEE0 82 aa2.37□□□□□ -2.03
PTPN22-207ENST00000528414 SMR3AQ99954 134 aa2.37□□□□□ -2.03
PTPN22-207ENST00000528414 UTP20O75691 2785 aaKnown RBP2.37□□□□□ -2.03
PTPN22-207ENST00000528414 IGHV4OR15-8A0A075B7B6 117 aa2.37□□□□□ -2.03
PTPN22-207ENST00000528414 LRBAP50851 2863 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 SPINK7P58062 85 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 Q9BRP9 147 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 C14orf132Q9NPU4 83 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 SORL1Q92673 2214 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 ALPK2Q86TB3 2170 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 IGLV2-18A0A075B6J9 118 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 LINC00167Q96N53 147 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 LITAFQ99732 161 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 A0A0C4DFX4 3053 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 APC2O95996 2303 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 STARD9Q9P2P6 4700 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 URB1O60287 2271 aaKnown RBP2.36□□□□□ -2.03
PTPN22-207ENST00000528414 HIVEP3Q5T1R4 2406 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 CNBPP62633 177 aaKnown RBP2.36□□□□□ -2.03
PTPN22-207ENST00000528414 C10orf25Q5T742 122 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.36□□□□□ -2.03
PTPN22-207ENST00000528414 C9orf47Q6ZRZ4 202 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 HIGD2AQ9BW72 106 aa2.36□□□□□ -2.03
PTPN22-207ENST00000528414 FREM3P0C091 2139 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 ITPR2Q14571 2701 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 ZNF625Q96I27 306 aaPredicted RBP2.35□□□□□ -2.03
PTPN22-207ENST00000528414 ARHGAP5-AS1Q96IT6 56 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 CHCHD7Q9BUK0 85 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 ZNRD1Q9P1U0 126 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 CUBNO60494 3623 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 IGLV1-50A0A075B6I6 118 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 A0A0J9YX75 114 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 PANO1I0J062 215 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 BPY2O14599 106 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 LINC01590Q5TEZ4 76 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 MYO9AB2RTY4 2548 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 IGHV3-66A0A0C4DH42 116 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 ODF3BA8MYP8 253 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 PRAC2D3DTV9 90 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 K7ERS5 55 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 CFAP47Q6ZTR5 3102 aa2.35□□□□□ -2.03
PTPN22-207ENST00000528414 IGHV1-18A0A0C4DH31 117 aa2.34□□□□□ -2.03
PTPN22-207ENST00000528414 A0A1B0GUT8 65 aa2.34□□□□□ -2.03
PTPN22-207ENST00000528414 IGHV1-46P01743 117 aa2.34□□□□□ -2.03
PTPN22-207ENST00000528414 IAPPP10997 89 aa2.34□□□□□ -2.03
PTPN22-207ENST00000528414 ELOF1P60002 83 aaKnown RBP2.34□□□□□ -2.03
PTPN22-207ENST00000528414 Q8N3U1 123 aa2.34□□□□□ -2.03
PTPN22-207ENST00000528414 CEP295Q9C0D2 2601 aa2.34□□□□□ -2.03
PTPN22-207ENST00000528414 FASNP49327 2511 aaKnown RBP2.34□□□□□ -2.03
PTPN22-207ENST00000528414 TRAV21A0A0B4J279 112 aa2.34□□□□□ -2.04
PTPN22-207ENST00000528414 K7EIL1 84 aa2.34□□□□□ -2.04
PTPN22-207ENST00000528414 M0R135 149 aa2.34□□□□□ -2.04
PTPN22-207ENST00000528414 SLURP1P55000 103 aa2.34□□□□□ -2.04
PTPN22-207ENST00000528414 DEFB134Q4QY38 66 aa2.34□□□□□ -2.04
PTPN22-207ENST00000528414 SMIM29Q86T20 159 aa2.34□□□□□ -2.04
PTPN22-207ENST00000528414 TMEM14CQ9P0S9 112 aa2.34□□□□□ -2.04
PTPN22-207ENST00000528414 CELSR2Q9HCU4 2923 aa2.34□□□□□ -2.04
PTPN22-207ENST00000528414 LINC01558Q9Y6Z2 57 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 CELSR1Q9NYQ6 3014 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 KRTAP29-1A8MX34 341 aaPredicted RBP2.33□□□□□ -2.04
PTPN22-207ENST00000528414 IGKV3-20P01619 116 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 IGHV1-8P0DP01 117 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 PIEZO2Q9H5I5 2752 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 IGLV4-69A0A075B6H9 119 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 DEFB110Q30KQ9 67 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 SPANXN5Q5MJ07 72 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 FAM74A4Q5TZK3 123 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms