RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 TMEM126AQ9H061 195 aa14.09□□□□□ -0.15
PACSIN3-204ENST00000528201 LINC00310P59036 64 aa14.08□□□□□ -0.16
PACSIN3-204ENST00000528201 A0A0U1RRA0 63 aa14.07□□□□□ -0.16
PACSIN3-204ENST00000528201 M0R378 163 aa14.07□□□□□ -0.16
PACSIN3-204ENST00000528201 CRYGAP11844 174 aa14.07□□□□□ -0.16
PACSIN3-204ENST00000528201 RPL24P83731 157 aaKnown RBP14.07□□□□□ -0.16
PACSIN3-204ENST00000528201 KRTAP13-2Q52LG2 175 aa14.07□□□□□ -0.16
PACSIN3-204ENST00000528201 HSBP1O75506 76 aa14.06□□□□□ -0.16
PACSIN3-204ENST00000528201 TSPAN13O95857 204 aa14.06□□□□□ -0.16
PACSIN3-204ENST00000528201 TRGC2P03986 189 aa14.06□□□□□ -0.16
PACSIN3-204ENST00000528201 LINC00158P58513 81 aa14.06□□□□□ -0.16
PACSIN3-204ENST00000528201 PRR4Q16378 134 aa14.05□□□□□ -0.16
PACSIN3-204ENST00000528201 TYMSOSQ8TAI1 123 aa14.05□□□□□ -0.16
PACSIN3-204ENST00000528201 FAM19A1Q7Z5A9 133 aa14.04□□□□□ -0.16
PACSIN3-204ENST00000528201 SMIM13P0DJ93 91 aa14.03□□□□□ -0.16
PACSIN3-204ENST00000528201 H0Y8G0 127 aa14□□□□□ -0.17
PACSIN3-204ENST00000528201 SERF1AO75920 110 aa14□□□□□ -0.17
PACSIN3-204ENST00000528201 SLC7A5P1Q8MH63 180 aa14□□□□□ -0.17
PACSIN3-204ENST00000528201 TSPEAR-AS2P59090 65 aa13.98□□□□□ -0.17
PACSIN3-204ENST00000528201 FAM229BQ4G0N7 80 aa13.98□□□□□ -0.17
PACSIN3-204ENST00000528201 MIR7-3HGQ8N6C7 128 aa13.97□□□□□ -0.17
PACSIN3-204ENST00000528201 NDUFA12Q9UI09 145 aa13.97□□□□□ -0.17
PACSIN3-204ENST00000528201 PLEKHB2Q96CS7 222 aa13.96□□□□□ -0.17
PACSIN3-204ENST00000528201 LEPROTL1O95214 131 aa13.95□□□□□ -0.18
PACSIN3-204ENST00000528201 MEIG1Q5JSS6 88 aa13.95□□□□□ -0.18
PACSIN3-204ENST00000528201 BOD1L2Q8IYS8 172 aa13.95□□□□□ -0.18
PACSIN3-204ENST00000528201 HERV-K104P63124 156 aa13.94□□□□□ -0.18
PACSIN3-204ENST00000528201 COLCA2A8K830 154 aa13.93□□□□□ -0.18
PACSIN3-204ENST00000528201 NCR3O14931 201 aa13.93□□□□□ -0.18
PACSIN3-204ENST00000528201 MUC2Q02817 5179 aa13.93□□□□□ -0.18
PACSIN3-204ENST00000528201 PMCHL2Q9BQD1 86 aa13.92□□□□□ -0.18
PACSIN3-204ENST00000528201 HIGD2AQ9BW72 106 aa13.92□□□□□ -0.18
PACSIN3-204ENST00000528201 MYMXA0A1B0GTQ4 84 aa13.9□□□□□ -0.18
PACSIN3-204ENST00000528201 ATP6V1G1O75348 118 aa13.9□□□□□ -0.18
PACSIN3-204ENST00000528201 FABP4P15090 132 aa13.9□□□□□ -0.18
PACSIN3-204ENST00000528201 IGKV2D-26A0A0A0MRZ7 120 aa13.89□□□□□ -0.19
PACSIN3-204ENST00000528201 LEPROTO15243 131 aa13.89□□□□□ -0.19
PACSIN3-204ENST00000528201 C3orf22Q8N5N4 141 aa13.89□□□□□ -0.19
PACSIN3-204ENST00000528201 LINC00304Q8N9R0 145 aa13.89□□□□□ -0.19
PACSIN3-204ENST00000528201 DAND5Q8N907 189 aa13.88□□□□□ -0.19
PACSIN3-204ENST00000528201 PLNP26678 52 aa13.87□□□□□ -0.19
PACSIN3-204ENST00000528201 SPRR1AP35321 89 aa13.87□□□□□ -0.19
PACSIN3-204ENST00000528201 HSPB8Q9UJY1 196 aa13.87□□□□□ -0.19
PACSIN3-204ENST00000528201 PRYO14603 147 aa13.86□□□□□ -0.19
PACSIN3-204ENST00000528201 SPRR4Q96PI1 79 aa13.86□□□□□ -0.19
PACSIN3-204ENST00000528201 RETNLBQ9BQ08 111 aa13.86□□□□□ -0.19
PACSIN3-204ENST00000528201 KCNQ1DNQ9H478 68 aa13.86□□□□□ -0.19
PACSIN3-204ENST00000528201 TRBV10-3A0A0K0K1G6 114 aa13.85□□□□□ -0.19
PACSIN3-204ENST00000528201 KRTAP4-16G5E9R7 235 aaPredicted RBP13.85□□□□□ -0.19
PACSIN3-204ENST00000528201 DPM2O94777 84 aa13.85□□□□□ -0.19
PACSIN3-204ENST00000528201 LINC00587B1AMM8 73 aa13.84□□□□□ -0.19
PACSIN3-204ENST00000528201 J3QQQ9 107 aa13.84□□□□□ -0.19
PACSIN3-204ENST00000528201 LINC00337Q8N6G1 96 aa13.83□□□□□ -0.2
PACSIN3-204ENST00000528201 MAP1LC3CQ9BXW4 147 aa13.83□□□□□ -0.2
PACSIN3-204ENST00000528201 LOC107984156A0A0G2JMH3 177 aa13.82□□□□□ -0.2
PACSIN3-204ENST00000528201 IGKCP01834 107 aa13.82□□□□□ -0.2
PACSIN3-204ENST00000528201 ARL17AQ8IVW1 177 aa13.82□□□□□ -0.2
PACSIN3-204ENST00000528201 HERVK_113P61574 105 aa13.78□□□□□ -0.2
PACSIN3-204ENST00000528201 SMCR5Q8TEV8 140 aa13.78□□□□□ -0.2
PACSIN3-204ENST00000528201 ETDCA0A1B0GVM5 59 aa13.77□□□□□ -0.21
PACSIN3-204ENST00000528201 EIF4EBP3O60516 100 aaPredicted RBP13.76□□□□□ -0.21
PACSIN3-204ENST00000528201 LGALS3P17931 250 aaKnown RBP13.76□□□□□ -0.21
PACSIN3-204ENST00000528201 NMUP48645 174 aa13.76□□□□□ -0.21
PACSIN3-204ENST00000528201 B5MCH6 92 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BKO60814 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BJP06899 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BOP23527 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BBP33778 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BDP58876 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BCP62807 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST2H2BEQ16778 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 SOSTDC1Q6X4U4 206 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BHQ93079 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BNQ99877 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 HIST1H2BMQ99879 126 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 PPDPFQ9H3Y8 114 aa13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 ZNF706Q9Y5V0 76 aaPredicted RBP13.74□□□□□ -0.21
PACSIN3-204ENST00000528201 TRBV10-2A0A0K0K1G8 114 aa13.73□□□□□ -0.21
PACSIN3-204ENST00000528201 ERC2-IT1O76042 136 aa13.73□□□□□ -0.21
PACSIN3-204ENST00000528201 DDTP30046 118 aa13.73□□□□□ -0.21
PACSIN3-204ENST00000528201 ADAMTSL4-AS1Q5T5F5 129 aa13.73□□□□□ -0.21
PACSIN3-204ENST00000528201 A0A0J9YXY3 114 aa13.71□□□□□ -0.21
PACSIN3-204ENST00000528201 E9PLD3 99 aa13.71□□□□□ -0.21
PACSIN3-204ENST00000528201 SPANXB1Q9NS25 103 aaPredicted RBP13.71□□□□□ -0.21
PACSIN3-204ENST00000528201 MUC17Q685J3 4493 aa13.7□□□□□ -0.22
PACSIN3-204ENST00000528201 SYS1-DBNDD2H3BUS1 97 aa13.7□□□□□ -0.22
PACSIN3-204ENST00000528201 CTAG1AP78358 180 aa13.7□□□□□ -0.22
PACSIN3-204ENST00000528201 LINC00483Q53H64 154 aa13.7□□□□□ -0.22
PACSIN3-204ENST00000528201 NPC2P61916 151 aa13.69□□□□□ -0.22
PACSIN3-204ENST00000528201 Q9BRP9 147 aa13.69□□□□□ -0.22
PACSIN3-204ENST00000528201 IGLV7-46A0A075B6I9 117 aa13.68□□□□□ -0.22
PACSIN3-204ENST00000528201 NDUFC2O95298 119 aa13.68□□□□□ -0.22
PACSIN3-204ENST00000528201 IGLV6-57P01721 117 aa13.68□□□□□ -0.22
PACSIN3-204ENST00000528201 Q8NBF4 154 aa13.68□□□□□ -0.22
PACSIN3-204ENST00000528201 MIEN1Q9BRT3 115 aa13.68□□□□□ -0.22
PACSIN3-204ENST00000528201 SPAG11AQ6PDA7 123 aa13.66□□□□□ -0.22
PACSIN3-204ENST00000528201 S100A12P80511 92 aa13.65□□□□□ -0.22
PACSIN3-204ENST00000528201 TPRXLQ17RH7 258 aa13.65□□□□□ -0.22
PACSIN3-204ENST00000528201 GAGE2AQ6NT46 116 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms