RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 MED9Q9NWA0 146 aa2.77□□□□□ -1.97
SF3B2-205ENST00000526653 GNG13Q9P2W3 67 aa2.77□□□□□ -1.97
SF3B2-205ENST00000526653 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
SF3B2-205ENST00000526653 IGLV6-57P01721 117 aa2.76□□□□□ -1.97
SF3B2-205ENST00000526653 MT1FP04733 61 aa2.76□□□□□ -1.97
SF3B2-205ENST00000526653 RPS29P62273 56 aaKnown RBP2.76□□□□□ -1.97
SF3B2-205ENST00000526653 SSBP3-AS1Q7Z2R9 100 aa2.76□□□□□ -1.97
SF3B2-205ENST00000526653 Q8IZM0 81 aa2.76□□□□□ -1.97
SF3B2-205ENST00000526653 OCC1Q8TAD7 63 aa2.76□□□□□ -1.97
SF3B2-205ENST00000526653 SMCR5Q8TEV8 140 aa2.76□□□□□ -1.97
SF3B2-205ENST00000526653 BIN3Q9NQY0 253 aa2.76□□□□□ -1.97
SF3B2-205ENST00000526653 SPANXA1Q9NS26 97 aa2.76□□□□□ -1.97
SF3B2-205ENST00000526653 ZNF706Q9Y5V0 76 aaPredicted RBP2.76□□□□□ -1.97
SF3B2-205ENST00000526653 TCAPO15273 167 aa2.75□□□□□ -1.97
SF3B2-205ENST00000526653 LINC01551Q86U37 167 aa2.75□□□□□ -1.97
SF3B2-205ENST00000526653 LINC01561Q8N1V8 128 aa2.75□□□□□ -1.97
SF3B2-205ENST00000526653 C11orf52Q96A22 123 aa2.75□□□□□ -1.97
SF3B2-205ENST00000526653 BORCS7Q96B45 105 aa2.75□□□□□ -1.97
SF3B2-205ENST00000526653 TIMM17AQ99595 171 aa2.75□□□□□ -1.97
SF3B2-205ENST00000526653 TMEM191AQ9H0A3 160 aa2.75□□□□□ -1.97
SF3B2-205ENST00000526653 KMT2DO14686 5537 aa2.74□□□□□ -1.97
SF3B2-205ENST00000526653 FXYD6-FXYD2A0A087WZ82 144 aa2.74□□□□□ -1.97
SF3B2-205ENST00000526653 A8MWL6 223 aa2.74□□□□□ -1.97
SF3B2-205ENST00000526653 K7EN84 100 aa2.74□□□□□ -1.97
SF3B2-205ENST00000526653 GATCO43716 136 aaKnown RBP2.74□□□□□ -1.97
SF3B2-205ENST00000526653 PPP1R17O96001 155 aa2.74□□□□□ -1.97
SF3B2-205ENST00000526653 RAB14P61106 215 aa2.74□□□□□ -1.97
SF3B2-205ENST00000526653 FAM231DQ6ZW35 169 aa2.74□□□□□ -1.97
SF3B2-205ENST00000526653 SMIM12Q96EX1 92 aa2.74□□□□□ -1.97
SF3B2-205ENST00000526653 GEMIN7Q9H840 131 aaKnown RBP2.74□□□□□ -1.97
SF3B2-205ENST00000526653 IGLV4-3A0A075B6K6 122 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 A0A1B0GUT8 65 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 PPP1R2P9O14990 202 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 PFN2P35080 140 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 IFI27P40305 119 aaPredicted RBP2.73□□□□□ -1.97
SF3B2-205ENST00000526653 SNRPEP62304 92 aaKnown RBP2.73□□□□□ -1.97
SF3B2-205ENST00000526653 HRCT1Q6UXD1 115 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 TEX43Q6ZNM6 134 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 AKAP14Q86UN6 197 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 TMEM141Q96I45 108 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 EIF5A2Q9GZV4 153 aaKnown RBP2.73□□□□□ -1.97
SF3B2-205ENST00000526653 VCX2Q9H322 139 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 CDKN2A-AS1Q9UH64 79 aa2.73□□□□□ -1.97
SF3B2-205ENST00000526653 VPREB1P12018 145 aa2.72□□□□□ -1.97
SF3B2-205ENST00000526653 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
SF3B2-205ENST00000526653 IFITM3Q01628 133 aa2.72□□□□□ -1.97
SF3B2-205ENST00000526653 MRPL51Q4U2R6 128 aaKnown RBP2.72□□□□□ -1.97
SF3B2-205ENST00000526653 FAM19A3Q7Z5A8 133 aa2.72□□□□□ -1.97
SF3B2-205ENST00000526653 C20orf78Q9BR46 151 aa2.72□□□□□ -1.97
SF3B2-205ENST00000526653 TRBV24-1A0A075B6N3 115 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 HIGD1CA8MV81 97 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 UMAD1C9J7I0 102 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 PDE6DO43924 150 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 LGALS3P17931 250 aaKnown RBP2.71□□□□□ -1.98
SF3B2-205ENST00000526653 RAB5AP20339 215 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 CKS2P33552 79 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 LINC00483Q53H64 154 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 Q8NDZ9 215 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 C2orf88Q9BSF0 95 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 MANBALQ9NQG1 85 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 PRO0461Q9UI25 63 aa2.71□□□□□ -1.98
SF3B2-205ENST00000526653 CHTOPQ9Y3Y2 248 aaKnown RBP2.71□□□□□ -1.98
SF3B2-205ENST00000526653 LOC389332A0A1B0GUA5 103 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 C20orf202A1L168 122 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 ARPC5O15511 151 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 ERC2-IT1O76042 136 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 C9orf153Q5TBE3 101 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 FAM104BQ5XKR9 115 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 C2orf66Q6UXQ4 117 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 COX7B2Q8TF08 81 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 SMIM2Q9BVW6 85 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 SND1-IT1Q9HBX3 110 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
SF3B2-205ENST00000526653 LINC00862A6NCI5 91 aa2.69□□□□□ -1.98
SF3B2-205ENST00000526653 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
SF3B2-205ENST00000526653 CXCL5P42830 114 aa2.69□□□□□ -1.98
SF3B2-205ENST00000526653 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
SF3B2-205ENST00000526653 ETDCA0A1B0GVM5 59 aa2.68□□□□□ -1.98
SF3B2-205ENST00000526653 NPYP01303 97 aa2.68□□□□□ -1.98
SF3B2-205ENST00000526653 HERVK_113P63121 156 aa2.68□□□□□ -1.98
SF3B2-205ENST00000526653 AMELXQ99217 191 aa2.68□□□□□ -1.98
SF3B2-205ENST00000526653 BATF3Q9NR55 127 aa2.68□□□□□ -1.98
SF3B2-205ENST00000526653 D6R8Y8 96 aa2.67□□□□□ -1.98
SF3B2-205ENST00000526653 H7C2G1 150 aa2.67□□□□□ -1.98
SF3B2-205ENST00000526653 ATP5LO75964 103 aa2.67□□□□□ -1.98
SF3B2-205ENST00000526653 PDZD11Q5EBL8 140 aa2.67□□□□□ -1.98
SF3B2-205ENST00000526653 ATP11AUNQ6ZP68 121 aa2.67□□□□□ -1.98
SF3B2-205ENST00000526653 ZNF625Q96I27 306 aaPredicted RBP2.67□□□□□ -1.98
SF3B2-205ENST00000526653 LIMD2Q9BT23 127 aa2.67□□□□□ -1.98
SF3B2-205ENST00000526653 TEX46H3BTG2 121 aa2.66□□□□□ -1.98
SF3B2-205ENST00000526653 SPINK8P0C7L1 97 aa2.66□□□□□ -1.98
SF3B2-205ENST00000526653 CEBPGP53567 150 aa2.66□□□□□ -1.98
SF3B2-205ENST00000526653 SEC11AP67812 179 aa2.66□□□□□ -1.98
SF3B2-205ENST00000526653 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SF3B2-205ENST00000526653 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
SF3B2-205ENST00000526653 S100ZQ8WXG8 99 aa2.66□□□□□ -1.98
SF3B2-205ENST00000526653 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
SF3B2-205ENST00000526653 A0A0U1RRA0 63 aa2.65□□□□□ -1.99
SF3B2-205ENST00000526653 IGIPA6NJ69 53 aa2.65□□□□□ -1.99
SF3B2-205ENST00000526653 SMLR1H3BR10 107 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms