RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 PCP2Q8IVA1 136 aa11.74□□□□□ -0.53
PTPRK-218ENST00000525459 SMR3BP02814 79 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-218ENST00000525459 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
PTPRK-218ENST00000525459 LBHQ53QV2 105 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-218ENST00000525459 SERTAD4-AS1Q5TG53 156 aa11.73□□□□□ -0.53
PTPRK-218ENST00000525459 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
PTPRK-218ENST00000525459 NKAPP1Q8N9T2 125 aa11.73□□□□□ -0.53
PTPRK-218ENST00000525459 KIAA1109Q2LD37 5005 aa11.73□□□□□ -0.53
PTPRK-218ENST00000525459 PLA2G1BP04054 148 aaKnown RBP11.72□□□□□ -0.53
PTPRK-218ENST00000525459 KRTAP7-1Q8IUC3 87 aa11.72□□□□□ -0.53
PTPRK-218ENST00000525459 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
PTPRK-218ENST00000525459 PAM16Q9Y3D7 125 aa11.72□□□□□ -0.53
PTPRK-218ENST00000525459 SPATA45Q537H7 98 aa11.71□□□□□ -0.54
PTPRK-218ENST00000525459 Q6ZVH6 145 aa11.71□□□□□ -0.54
PTPRK-218ENST00000525459 LITAFQ99732 161 aa11.71□□□□□ -0.54
PTPRK-218ENST00000525459 C22orf24Q9Y442 160 aa11.71□□□□□ -0.54
PTPRK-218ENST00000525459 COX8AP10176 69 aa11.7□□□□□ -0.54
PTPRK-218ENST00000525459 VPREB1P12018 145 aa11.7□□□□□ -0.54
PTPRK-218ENST00000525459 Q5VSD8 79 aa11.7□□□□□ -0.54
PTPRK-218ENST00000525459 MRPL55Q7Z7F7 128 aaKnown RBP11.7□□□□□ -0.54
PTPRK-218ENST00000525459 DAND5Q8N907 189 aa11.7□□□□□ -0.54
PTPRK-218ENST00000525459 PHF5AQ7RTV0 110 aaKnown RBP11.69□□□□□ -0.54
PTPRK-218ENST00000525459 BOD1L2Q8IYS8 172 aa11.69□□□□□ -0.54
PTPRK-218ENST00000525459 SPANXDQ9BXN6 97 aa11.69□□□□□ -0.54
PTPRK-218ENST00000525459 SPANXCQ9NY87 97 aa11.69□□□□□ -0.54
PTPRK-218ENST00000525459 RYR1P21817 5038 aa11.69□□□□□ -0.54
PTPRK-218ENST00000525459 DLEU1O43261 78 aa11.69□□□□□ -0.54
PTPRK-218ENST00000525459 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
PTPRK-218ENST00000525459 RPL37AP61513 92 aaKnown RBP11.68□□□□□ -0.54
PTPRK-218ENST00000525459 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
PTPRK-218ENST00000525459 UBE2BP63146 152 aa11.67□□□□□ -0.54
PTPRK-218ENST00000525459 HSPG2P98160 4391 aa11.67□□□□□ -0.54
PTPRK-218ENST00000525459 NDUFC2O95298 119 aa11.66□□□□□ -0.54
PTPRK-218ENST00000525459 IFITM1P13164 125 aa11.66□□□□□ -0.54
PTPRK-218ENST00000525459 S100A12P80511 92 aa11.66□□□□□ -0.54
PTPRK-218ENST00000525459 LINC00308Q8TCZ7 52 aa11.66□□□□□ -0.54
PTPRK-218ENST00000525459 SPANXB1Q9NS25 103 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-218ENST00000525459 M0R378 163 aa11.63□□□□□ -0.55
PTPRK-218ENST00000525459 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
PTPRK-218ENST00000525459 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
PTPRK-218ENST00000525459 SMIM6P0DI80 62 aa11.63□□□□□ -0.55
PTPRK-218ENST00000525459 PRR3P79522 188 aaKnown RBP11.63□□□□□ -0.55
PTPRK-218ENST00000525459 LINC00167Q96N53 147 aa11.63□□□□□ -0.55
PTPRK-218ENST00000525459 NPC2P61916 151 aa11.62□□□□□ -0.55
PTPRK-218ENST00000525459 SOSTDC1Q6X4U4 206 aa11.62□□□□□ -0.55
PTPRK-218ENST00000525459 Q8NDZ9 215 aa11.62□□□□□ -0.55
PTPRK-218ENST00000525459 C14orf144Q96I85 54 aa11.61□□□□□ -0.55
PTPRK-218ENST00000525459 PSORS1C2Q9UIG4 136 aa11.6□□□□□ -0.55
PTPRK-218ENST00000525459 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTPRK-218ENST00000525459 HIGD1BQ9P298 99 aa11.59□□□□□ -0.55
PTPRK-218ENST00000525459 GAGE10A6NGK3 116 aa11.58□□□□□ -0.56
PTPRK-218ENST00000525459 NCR3O14931 201 aa11.58□□□□□ -0.56
PTPRK-218ENST00000525459 KRTAP10-4P60372 401 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-218ENST00000525459 IGLV1-50A0A075B6I6 118 aa11.57□□□□□ -0.56
PTPRK-218ENST00000525459 LINC00518Q8N0U6 118 aa11.57□□□□□ -0.56
PTPRK-218ENST00000525459 KRTAP17-1Q9BYP8 105 aa11.57□□□□□ -0.56
PTPRK-218ENST00000525459 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-218ENST00000525459 IGKV2-28A0A075B6P5 120 aa11.56□□□□□ -0.56
PTPRK-218ENST00000525459 LOC105371267A0A1B0GV96 52 aa11.56□□□□□ -0.56
PTPRK-218ENST00000525459 RPL37AP8A6NKH3 93 aa11.56□□□□□ -0.56
PTPRK-218ENST00000525459 IGKV2D-28P01615 120 aa11.56□□□□□ -0.56
PTPRK-218ENST00000525459 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
PTPRK-218ENST00000525459 CBY1Q9Y3M2 126 aa11.56□□□□□ -0.56
PTPRK-218ENST00000525459 KRTAP11-1Q8IUC1 163 aa11.55□□□□□ -0.56
PTPRK-218ENST00000525459 HERC2O95714 4834 aa11.55□□□□□ -0.56
PTPRK-218ENST00000525459 MUSTN1Q8IVN3 82 aa11.55□□□□□ -0.56
PTPRK-218ENST00000525459 S100A7L2Q5SY68 101 aa11.54□□□□□ -0.56
PTPRK-218ENST00000525459 HIST1H4GQ99525 98 aa11.54□□□□□ -0.56
PTPRK-218ENST00000525459 PRYO14603 147 aa11.53□□□□□ -0.56
PTPRK-218ENST00000525459 DDTP30046 118 aa11.53□□□□□ -0.56
PTPRK-218ENST00000525459 REG3GQ6UW15 175 aa11.52□□□□□ -0.56
PTPRK-218ENST00000525459 UQCR10Q9UDW1 63 aa11.52□□□□□ -0.56
PTPRK-218ENST00000525459 TRBV10-3A0A0K0K1G6 114 aa11.52□□□□□ -0.57
PTPRK-218ENST00000525459 BCE1O60756 84 aa11.52□□□□□ -0.57
PTPRK-218ENST00000525459 C2orf91Q6ZV80 131 aa11.52□□□□□ -0.57
PTPRK-218ENST00000525459 IGLV6-57P01721 117 aa11.51□□□□□ -0.57
PTPRK-218ENST00000525459 IGLV7-43P04211 117 aa11.51□□□□□ -0.57
PTPRK-218ENST00000525459 TAL2Q16559 108 aa11.51□□□□□ -0.57
PTPRK-218ENST00000525459 TMEM126AQ9H061 195 aa11.51□□□□□ -0.57
PTPRK-218ENST00000525459 KCNQ1DNQ9H478 68 aa11.51□□□□□ -0.57
PTPRK-218ENST00000525459 KRTAP4-5Q9BYR2 181 aa11.49□□□□□ -0.57
PTPRK-218ENST00000525459 VPS13BQ7Z7G8 4022 aa11.49□□□□□ -0.57
PTPRK-218ENST00000525459 FAT1Q14517 4588 aa11.49□□□□□ -0.57
PTPRK-218ENST00000525459 SPINK6Q6UWN8 80 aa11.49□□□□□ -0.57
PTPRK-218ENST00000525459 SRRM2Q9UQ35 2752 aaKnown RBP11.48□□□□□ -0.57
PTPRK-218ENST00000525459 INAFM2P0DMQ5 153 aa11.47□□□□□ -0.57
PTPRK-218ENST00000525459 TRAV13-2A0A0B4J235 113 aa11.46□□□□□ -0.57
PTPRK-218ENST00000525459 RPL28P46779 137 aaKnown RBP11.46□□□□□ -0.57
PTPRK-218ENST00000525459 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
PTPRK-218ENST00000525459 TRAV23DV6A0A075B6W5 121 aa11.46□□□□□ -0.58
PTPRK-218ENST00000525459 A4D1N5 150 aa11.46□□□□□ -0.58
PTPRK-218ENST00000525459 SPRR1AP35321 89 aa11.46□□□□□ -0.58
PTPRK-218ENST00000525459 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.58
PTPRK-218ENST00000525459 ZNF861PO60384 105 aa11.45□□□□□ -0.58
PTPRK-218ENST00000525459 UBE2AP49459 152 aa11.44□□□□□ -0.58
PTPRK-218ENST00000525459 TMEM238LA0A1B0GVL6 79 aa11.43□□□□□ -0.58
PTPRK-218ENST00000525459 A6NJY4 79 aa11.43□□□□□ -0.58
PTPRK-218ENST00000525459 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
PTPRK-218ENST00000525459 FAM19A1Q7Z5A9 133 aa11.43□□□□□ -0.58
PTPRK-218ENST00000525459 DIRC1Q969H9 104 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms