RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 RTL8CO15255 209 aa11.8□□□□□ -0.52
BEST1-203ENST00000524877 SMCPP49901 116 aaPredicted RBP11.8□□□□□ -0.52
BEST1-203ENST00000524877 PRO0461Q9UI25 63 aa11.8□□□□□ -0.52
BEST1-203ENST00000524877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.8□□□□□ -0.52
BEST1-203ENST00000524877 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
BEST1-203ENST00000524877 SORL1Q92673 2214 aa11.8□□□□□ -0.52
BEST1-203ENST00000524877 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
BEST1-203ENST00000524877 ZFYVE26Q68DK2 2539 aa11.79□□□□□ -0.52
BEST1-203ENST00000524877 KTN1-AS1Q86SY8 53 aa11.79□□□□□ -0.52
BEST1-203ENST00000524877 EPG5Q9HCE0 2579 aa11.76□□□□□ -0.53
BEST1-203ENST00000524877 RETNLBQ9BQ08 111 aa11.76□□□□□ -0.53
BEST1-203ENST00000524877 LINC01547P58512 204 aaPredicted RBP11.75□□□□□ -0.53
BEST1-203ENST00000524877 LCA10Q71F78 164 aa11.75□□□□□ -0.53
BEST1-203ENST00000524877 TM2D3Q9BRN9 247 aa11.74□□□□□ -0.53
BEST1-203ENST00000524877 A0A087WYN8 130 aa11.74□□□□□ -0.53
BEST1-203ENST00000524877 Q8N814 137 aa11.73□□□□□ -0.53
BEST1-203ENST00000524877 H3BS24 57 aa11.73□□□□□ -0.53
BEST1-203ENST00000524877 Q6ZVQ6 151 aa11.73□□□□□ -0.53
BEST1-203ENST00000524877 USP9XQ93008 2570 aaPredicted RBP11.72□□□□□ -0.53
BEST1-203ENST00000524877 PLA2G1BP04054 148 aaKnown RBP11.71□□□□□ -0.53
BEST1-203ENST00000524877 C22orf24Q9Y442 160 aa11.71□□□□□ -0.54
BEST1-203ENST00000524877 H0Y9P7 68 aa11.7□□□□□ -0.54
BEST1-203ENST00000524877 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
BEST1-203ENST00000524877 SPINT4Q6UDR6 99 aa11.7□□□□□ -0.54
BEST1-203ENST00000524877 CSNK1G2-AS1Q8NCQ2 148 aa11.7□□□□□ -0.54
BEST1-203ENST00000524877 DNAH10OSP0CZ25 163 aa11.68□□□□□ -0.54
BEST1-203ENST00000524877 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
BEST1-203ENST00000524877 PCOTHQ58A44 107 aa11.68□□□□□ -0.54
BEST1-203ENST00000524877 Q9BRP9 147 aa11.67□□□□□ -0.54
BEST1-203ENST00000524877 TSPEAR-AS2P59090 65 aa11.67□□□□□ -0.54
BEST1-203ENST00000524877 DNAH12Q6ZR08 3092 aa11.66□□□□□ -0.54
BEST1-203ENST00000524877 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
BEST1-203ENST00000524877 F8P00451 2351 aa11.66□□□□□ -0.54
BEST1-203ENST00000524877 AGRNO00468 2067 aa11.65□□□□□ -0.54
BEST1-203ENST00000524877 CYP4F30PQ9H0H9 118 aa11.65□□□□□ -0.54
BEST1-203ENST00000524877 TLN2Q9Y4G6 2542 aa11.64□□□□□ -0.55
BEST1-203ENST00000524877 A8MTW9 85 aa11.62□□□□□ -0.55
BEST1-203ENST00000524877 Q9UF83 564 aa11.62□□□□□ -0.55
BEST1-203ENST00000524877 FN1P02751 2386 aaKnown RBP11.62□□□□□ -0.55
BEST1-203ENST00000524877 A0A096LNJ9 63 aa11.62□□□□□ -0.55
BEST1-203ENST00000524877 A0A1B0GU69 56 aa11.62□□□□□ -0.55
BEST1-203ENST00000524877 Q6ZRP5 223 aa11.62□□□□□ -0.55
BEST1-203ENST00000524877 ATP11AUNQ6ZP68 121 aa11.61□□□□□ -0.55
BEST1-203ENST00000524877 J3QL48 77 aa11.61□□□□□ -0.55
BEST1-203ENST00000524877 PRLHP81277 87 aa11.61□□□□□ -0.55
BEST1-203ENST00000524877 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
BEST1-203ENST00000524877 USP9YO00507 2555 aaPredicted RBP11.6□□□□□ -0.55
BEST1-203ENST00000524877 IGHV3OR16-9A0A0B4J2B5 98 aa11.6□□□□□ -0.55
BEST1-203ENST00000524877 A8MUN3 132 aa11.6□□□□□ -0.55
BEST1-203ENST00000524877 LINC00575Q6W349 94 aa11.6□□□□□ -0.55
BEST1-203ENST00000524877 LINC00337Q8N6G1 96 aa11.59□□□□□ -0.55
BEST1-203ENST00000524877 POLQO75417 2590 aa11.59□□□□□ -0.55
BEST1-203ENST00000524877 C6orf48Q9UBA6 75 aa11.59□□□□□ -0.55
BEST1-203ENST00000524877 SMCR5Q8TEV8 140 aa11.58□□□□□ -0.55
BEST1-203ENST00000524877 LINC01546A6NGU7 62 aa11.58□□□□□ -0.56
BEST1-203ENST00000524877 GVQW2A0A096LPI5 108 aaPredicted RBP11.58□□□□□ -0.56
BEST1-203ENST00000524877 RPL37AP61513 92 aaKnown RBP11.57□□□□□ -0.56
BEST1-203ENST00000524877 PRR15Q8IV56 129 aa11.57□□□□□ -0.56
BEST1-203ENST00000524877 C1orf64Q8NEQ6 169 aa11.56□□□□□ -0.56
BEST1-203ENST00000524877 IGLV5-39A0A0G2JS06 123 aa11.56□□□□□ -0.56
BEST1-203ENST00000524877 SMIM29Q86T20 159 aa11.55□□□□□ -0.56
BEST1-203ENST00000524877 LINC00167Q96N53 147 aa11.55□□□□□ -0.56
BEST1-203ENST00000524877 CEP350Q5VT06 3117 aa11.54□□□□□ -0.56
BEST1-203ENST00000524877 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
BEST1-203ENST00000524877 APLNQ9ULZ1 77 aa11.52□□□□□ -0.56
BEST1-203ENST00000524877 GIG44P09565 113 aaPredicted RBP11.51□□□□□ -0.57
BEST1-203ENST00000524877 C2CD3Q4AC94 2353 aa11.5□□□□□ -0.57
BEST1-203ENST00000524877 HECTD1Q9ULT8 2610 aa11.5□□□□□ -0.57
BEST1-203ENST00000524877 ACANP16112 2415 aa11.49□□□□□ -0.57
BEST1-203ENST00000524877 RBM12B-AS1Q9P1G2 102 aa11.48□□□□□ -0.57
BEST1-203ENST00000524877 IGLV5-45A0A087WSX0 123 aa11.48□□□□□ -0.57
BEST1-203ENST00000524877 LINC00612Q8N6U2 182 aa11.48□□□□□ -0.57
BEST1-203ENST00000524877 CHD7Q9P2D1 2997 aa11.47□□□□□ -0.57
BEST1-203ENST00000524877 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
BEST1-203ENST00000524877 MTORP42345 2549 aa11.45□□□□□ -0.58
BEST1-203ENST00000524877 TYMSOSQ8TAI1 123 aa11.45□□□□□ -0.58
BEST1-203ENST00000524877 CHD9Q3L8U1 2897 aa11.45□□□□□ -0.58
BEST1-203ENST00000524877 ERC2-IT1O76042 136 aa11.45□□□□□ -0.58
BEST1-203ENST00000524877 A0A087WTM6 91 aa11.45□□□□□ -0.58
BEST1-203ENST00000524877 CHTF8P0CG12 524 aa11.44□□□□□ -0.58
BEST1-203ENST00000524877 HTTP42858 3142 aa11.44□□□□□ -0.58
BEST1-203ENST00000524877 H3BPC8 53 aa11.44□□□□□ -0.58
BEST1-203ENST00000524877 MOBPQ13875 183 aa11.42□□□□□ -0.58
BEST1-203ENST00000524877 TRAV22A0A0B4J277 110 aa11.42□□□□□ -0.58
BEST1-203ENST00000524877 KLKP1Q107X0 134 aa11.42□□□□□ -0.58
BEST1-203ENST00000524877 DEFB116Q30KQ4 102 aa11.41□□□□□ -0.58
BEST1-203ENST00000524877 LOC101927531A0A1B0GV80 90 aa11.41□□□□□ -0.58
BEST1-203ENST00000524877 SPINK1P00995 79 aa11.41□□□□□ -0.58
BEST1-203ENST00000524877 ACYP2P14621 99 aa11.41□□□□□ -0.58
BEST1-203ENST00000524877 CASC10Q5T4H9 136 aa11.4□□□□□ -0.58
BEST1-203ENST00000524877 A0A087WSZ3 146 aa11.4□□□□□ -0.58
BEST1-203ENST00000524877 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
BEST1-203ENST00000524877 LINC00476Q8WZB0 136 aa11.4□□□□□ -0.59
BEST1-203ENST00000524877 EPM2AB3EWF7 344 aa11.39□□□□□ -0.59
BEST1-203ENST00000524877 SSBP3-AS1Q7Z2R9 100 aa11.38□□□□□ -0.59
BEST1-203ENST00000524877 Q8NBF4 154 aa11.37□□□□□ -0.59
BEST1-203ENST00000524877 H7BZZ5 65 aa11.37□□□□□ -0.59
BEST1-203ENST00000524877 PRR34Q9NV39 138 aa11.33□□□□□ -0.59
BEST1-203ENST00000524877 FLNBO75369 2602 aaKnown RBP11.33□□□□□ -0.6
BEST1-203ENST00000524877 KIAA0087Q14695 138 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms