RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 GAGE2BQ13066 116 aa5.73□□□□□ -1.49
SDC2-207ENST00000522911 NRACQ8N912 160 aa5.73□□□□□ -1.49
SDC2-207ENST00000522911 CAMK2N2Q96S95 79 aa5.73□□□□□ -1.49
SDC2-207ENST00000522911 KIR2DL4Q99706 377 aa5.73□□□□□ -1.49
SDC2-207ENST00000522911 MRPL35Q9NZE8 188 aaKnown RBP5.73□□□□□ -1.49
SDC2-207ENST00000522911 A0A1W2PPM0 123 aa5.72□□□□□ -1.49
SDC2-207ENST00000522911 J3QR89 54 aa5.72□□□□□ -1.49
SDC2-207ENST00000522911 PAPPA-AS1Q5QFB9 102 aa5.72□□□□□ -1.49
SDC2-207ENST00000522911 Q6ZVH6 145 aa5.72□□□□□ -1.49
SDC2-207ENST00000522911 DIRC1Q969H9 104 aa5.72□□□□□ -1.49
SDC2-207ENST00000522911 SPCS1Q9Y6A9 102 aa5.72□□□□□ -1.49
SDC2-207ENST00000522911 IGHV3OR16-9A0A0B4J2B5 98 aa5.71□□□□□ -1.5
SDC2-207ENST00000522911 SMKR1H3BMG3 65 aa5.71□□□□□ -1.5
SDC2-207ENST00000522911 H3BUT2 72 aa5.71□□□□□ -1.5
SDC2-207ENST00000522911 IGLV7-43P04211 117 aa5.71□□□□□ -1.5
SDC2-207ENST00000522911 CEND1Q8N111 149 aa5.71□□□□□ -1.5
SDC2-207ENST00000522911 MUC2Q02817 5179 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 IGLV1-50A0A075B6I6 118 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 TRAV13-1A0A0B4J241 112 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 F8VRH5 84 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 MRPS36P82909 103 aaKnown RBP5.7□□□□□ -1.5
SDC2-207ENST00000522911 SPAG11BQ08648 103 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 C1orf137Q5JT78 98 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 ZC2HC1BQ5TFG8 222 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 Q6ZUT4 128 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 FAM104AQ969W3 186 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 SMIM2Q9BVW6 85 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 SPANXA1Q9NS26 97 aa5.7□□□□□ -1.5
SDC2-207ENST00000522911 F8W1H4 67 aa5.69□□□□□ -1.5
SDC2-207ENST00000522911 H0Y9J4 135 aa5.69□□□□□ -1.5
SDC2-207ENST00000522911 RPL18AQ02543 176 aaKnown RBP5.69□□□□□ -1.5
SDC2-207ENST00000522911 LYRM7Q5U5X0 104 aa5.69□□□□□ -1.5
SDC2-207ENST00000522911 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
SDC2-207ENST00000522911 C5orf38Q86SI9 138 aa5.69□□□□□ -1.5
SDC2-207ENST00000522911 PCP2Q8IVA1 136 aa5.69□□□□□ -1.5
SDC2-207ENST00000522911 TOMM6Q96B49 74 aa5.69□□□□□ -1.5
SDC2-207ENST00000522911 SCGB3A1Q96QR1 104 aa5.69□□□□□ -1.5
SDC2-207ENST00000522911 NDUFA1O15239 70 aa5.68□□□□□ -1.5
SDC2-207ENST00000522911 KRTAP1-4P0C5Y4 121 aa5.68□□□□□ -1.5
SDC2-207ENST00000522911 HERVK_113P61574 105 aa5.68□□□□□ -1.5
SDC2-207ENST00000522911 CHTOPQ9Y3Y2 248 aaKnown RBP5.68□□□□□ -1.5
SDC2-207ENST00000522911 MYMXA0A1B0GTQ4 84 aa5.67□□□□□ -1.5
SDC2-207ENST00000522911 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
SDC2-207ENST00000522911 RNASE13Q5GAN3 156 aaKnown RBP5.67□□□□□ -1.5
SDC2-207ENST00000522911 PRR26Q8N8Z3 221 aa5.67□□□□□ -1.5
SDC2-207ENST00000522911 RAB37Q96AX2 223 aa5.67□□□□□ -1.5
SDC2-207ENST00000522911 TMEM141Q96I45 108 aa5.67□□□□□ -1.5
SDC2-207ENST00000522911 HIST1H4GQ99525 98 aa5.67□□□□□ -1.5
SDC2-207ENST00000522911 OPRPNQ99935 248 aaPredicted RBP5.67□□□□□ -1.5
SDC2-207ENST00000522911 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
SDC2-207ENST00000522911 TP73-AS1Q9UF72 201 aa5.67□□□□□ -1.5
SDC2-207ENST00000522911 A0A087WZ39 114 aa5.66□□□□□ -1.5
SDC2-207ENST00000522911 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
SDC2-207ENST00000522911 E9PLD3 99 aa5.66□□□□□ -1.5
SDC2-207ENST00000522911 SCGB1A1P11684 91 aa5.66□□□□□ -1.5
SDC2-207ENST00000522911 RPL13AP40429 203 aaKnown RBP5.66□□□□□ -1.5
SDC2-207ENST00000522911 KIAA0087Q14695 138 aa5.66□□□□□ -1.5
SDC2-207ENST00000522911 LINC01561Q8N1V8 128 aa5.66□□□□□ -1.5
SDC2-207ENST00000522911 CYSLTR1Q9Y271 337 aa5.66□□□□□ -1.5
SDC2-207ENST00000522911 PYGO1Q9Y3Y4 419 aa5.66□□□□□ -1.5
SDC2-207ENST00000522911 IGKV2D-26A0A0A0MRZ7 120 aa5.65□□□□□ -1.5
SDC2-207ENST00000522911 A0A1B0GWB2 263 aa5.65□□□□□ -1.5
SDC2-207ENST00000522911 FXYD2P54710 66 aa5.65□□□□□ -1.5
SDC2-207ENST00000522911 RPL39P62891 51 aaKnown RBP5.65□□□□□ -1.5
SDC2-207ENST00000522911 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
SDC2-207ENST00000522911 KRTAP11-1Q8IUC1 163 aa5.65□□□□□ -1.5
SDC2-207ENST00000522911 KRTAP7-1Q8IUC3 87 aa5.65□□□□□ -1.5
SDC2-207ENST00000522911 VCX2Q9H322 139 aa5.65□□□□□ -1.5
SDC2-207ENST00000522911 NHP2Q9NX24 153 aaKnown RBP5.65□□□□□ -1.5
SDC2-207ENST00000522911 NDUFC2-KCTD14E9PQ53 114 aa5.64□□□□□ -1.51
SDC2-207ENST00000522911 C21orf62-AS1Q17RA5 79 aa5.64□□□□□ -1.51
SDC2-207ENST00000522911 C2orf66Q6UXQ4 117 aa5.64□□□□□ -1.51
SDC2-207ENST00000522911 UNQ6190/PRO20217Q6UXQ8 127 aa5.64□□□□□ -1.51
SDC2-207ENST00000522911 TIMM17AQ99595 171 aa5.64□□□□□ -1.51
SDC2-207ENST00000522911 C6orf48Q9UBA6 75 aa5.64□□□□□ -1.51
SDC2-207ENST00000522911 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
SDC2-207ENST00000522911 FAM168BA1KXE4 195 aa5.63□□□□□ -1.51
SDC2-207ENST00000522911 RPL24P83731 157 aaKnown RBP5.63□□□□□ -1.51
SDC2-207ENST00000522911 PMVKQ15126 192 aa5.63□□□□□ -1.51
SDC2-207ENST00000522911 M0QXV9 152 aa5.62□□□□□ -1.51
SDC2-207ENST00000522911 LINC00242Q5T6M2 205 aa5.62□□□□□ -1.51
SDC2-207ENST00000522911 SCGB1D4Q6XE38 83 aa5.62□□□□□ -1.51
SDC2-207ENST00000522911 TRBV20-1A0A075B6N2 111 aa5.61□□□□□ -1.51
SDC2-207ENST00000522911 ZNF815PA8K554 130 aa5.61□□□□□ -1.51
SDC2-207ENST00000522911 ZNF861PO60384 105 aa5.61□□□□□ -1.51
SDC2-207ENST00000522911 FAM19A5Q7Z5A7 132 aaPredicted RBP5.61□□□□□ -1.51
SDC2-207ENST00000522911 FAM19A3Q7Z5A8 133 aa5.61□□□□□ -1.51
SDC2-207ENST00000522911 SIGMAR1Q99720 223 aa5.61□□□□□ -1.51
SDC2-207ENST00000522911 SPANXB1Q9NS25 103 aaPredicted RBP5.61□□□□□ -1.51
SDC2-207ENST00000522911 IGLV4-3A0A075B6K6 122 aa5.6□□□□□ -1.51
SDC2-207ENST00000522911 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
SDC2-207ENST00000522911 C11orf86A6NJI1 115 aa5.6□□□□□ -1.51
SDC2-207ENST00000522911 UBE2D1P51668 147 aa5.6□□□□□ -1.51
SDC2-207ENST00000522911 GAGE2EQ4V326 116 aa5.6□□□□□ -1.51
SDC2-207ENST00000522911 C9orf129Q5T035 196 aaKnown RBP5.6□□□□□ -1.51
SDC2-207ENST00000522911 GAGE2DQ9UEU5 116 aa5.6□□□□□ -1.51
SDC2-207ENST00000522911 IGIPA6NJ69 53 aa5.59□□□□□ -1.51
SDC2-207ENST00000522911 UBE2BP63146 152 aa5.59□□□□□ -1.51
SDC2-207ENST00000522911 AMELXQ99217 191 aa5.59□□□□□ -1.51
SDC2-207ENST00000522911 NAA38Q9BRA0 125 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms