RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 PLAC8Q9NZF1 115 aa15.27■□□□□ 0.03
PVT1-212ENST00000521951 KRTAP7-1Q8IUC3 87 aa15.26■□□□□ 0.03
PVT1-212ENST00000521951 EPM2AB3EWF7 344 aa15.23■□□□□ 0.03
PVT1-212ENST00000521951 NPC2P61916 151 aa15.23■□□□□ 0.03
PVT1-212ENST00000521951 SERTAD4-AS1Q5TG53 156 aa15.23■□□□□ 0.03
PVT1-212ENST00000521951 FAM19A5Q7Z5A7 132 aaPredicted RBP15.23■□□□□ 0.03
PVT1-212ENST00000521951 SPANXDQ9BXN6 97 aa15.23■□□□□ 0.03
PVT1-212ENST00000521951 SPANXCQ9NY87 97 aa15.23■□□□□ 0.03
PVT1-212ENST00000521951 PLA2G2DQ9UNK4 145 aa15.23■□□□□ 0.03
PVT1-212ENST00000521951 LOC107984156A0A0G2JMH3 177 aa15.22■□□□□ 0.03
PVT1-212ENST00000521951 SOSTDC1Q6X4U4 206 aa15.22■□□□□ 0.03
PVT1-212ENST00000521951 ARL17AQ8IVW1 177 aa15.22■□□□□ 0.03
PVT1-212ENST00000521951 C12orf57Q99622 126 aa15.22■□□□□ 0.03
PVT1-212ENST00000521951 EIF4EBP3O60516 100 aaPredicted RBP15.22■□□□□ 0.03
PVT1-212ENST00000521951 CDK2AP2O75956 126 aa15.22■□□□□ 0.03
PVT1-212ENST00000521951 Q8NDZ9 215 aa15.21■□□□□ 0.03
PVT1-212ENST00000521951 LINC00308Q8TCZ7 52 aa15.21■□□□□ 0.03
PVT1-212ENST00000521951 MIEN1Q9BRT3 115 aa15.2■□□□□ 0.02
PVT1-212ENST00000521951 SPANXB1Q9NS25 103 aaPredicted RBP15.2■□□□□ 0.02
PVT1-212ENST00000521951 Q6ZVH6 145 aa15.19■□□□□ 0.02
PVT1-212ENST00000521951 VPREB1P12018 145 aa15.18■□□□□ 0.02
PVT1-212ENST00000521951 C2orf91Q6ZV80 131 aa15.18■□□□□ 0.02
PVT1-212ENST00000521951 HIGD1BQ9P298 99 aa15.18■□□□□ 0.02
PVT1-212ENST00000521951 RPL24P83731 157 aaKnown RBP15.17■□□□□ 0.02
PVT1-212ENST00000521951 SRSF9Q13242 221 aaKnown RBP eCLIP15.17■□□□□ 0.024e-6■■■■□ 20.8
PVT1-212ENST00000521951 PRO1933Q9H354 126 aa15.17■□□□□ 0.02
PVT1-212ENST00000521951 IGLV5-37A0A075B6J1 123 aa15.17■□□□□ 0.02
PVT1-212ENST00000521951 LINC00518Q8N0U6 118 aa15.17■□□□□ 0.02
PVT1-212ENST00000521951 UQCR10Q9UDW1 63 aa15.17■□□□□ 0.02
PVT1-212ENST00000521951 C22orf24Q9Y442 160 aa15.17■□□□□ 0.02
PVT1-212ENST00000521951 M0QXV9 152 aa15.16■□□□□ 0.02
PVT1-212ENST00000521951 IFITM1P13164 125 aa15.16■□□□□ 0.02
PVT1-212ENST00000521951 BIRC6Q9NR09 4857 aa15.16■□□□□ 0.02
PVT1-212ENST00000521951 PHF5AQ7RTV0 110 aaKnown RBP15.15■□□□□ 0.02
PVT1-212ENST00000521951 MUSTN1Q8IVN3 82 aa15.15■□□□□ 0.02
PVT1-212ENST00000521951 NKAPP1Q8N9T2 125 aa15.14■□□□□ 0.01
PVT1-212ENST00000521951 PRR3P79522 188 aaKnown RBP15.13■□□□□ 0.01
PVT1-212ENST00000521951 COPS9Q8WXC6 57 aa15.12■□□□□ 0.01
PVT1-212ENST00000521951 HIST1H4GQ99525 98 aa15.12■□□□□ 0.01
PVT1-212ENST00000521951 PPDPFQ9H3Y8 114 aa15.12■□□□□ 0.01
PVT1-212ENST00000521951 NDUFC2O95298 119 aa15.11■□□□□ 0.01
PVT1-212ENST00000521951 RYR1P21817 5038 aa15.1■□□□□ 0.01
PVT1-212ENST00000521951 SMR3BP02814 79 aaPredicted RBP15.1■□□□□ 0.01
PVT1-212ENST00000521951 MRPL55Q7Z7F7 128 aaKnown RBP15.1■□□□□ 0.01
PVT1-212ENST00000521951 NCR3O14931 201 aa15.09■□□□□ 0.01
PVT1-212ENST00000521951 HSPG2P98160 4391 aa15.08■□□□□ 0.01
PVT1-212ENST00000521951 LBHQ53QV2 105 aaPredicted RBP15.08■□□□□ 0.01
PVT1-212ENST00000521951 C7orf33Q8WU49 177 aa15.08■□□□□ 0.01
PVT1-212ENST00000521951 LINC00167Q96N53 147 aa15.08■□□□□ 0.01
PVT1-212ENST00000521951 KIAA1109Q2LD37 5005 aa15.08■□□□□ 0
PVT1-212ENST00000521951 GAGE10A6NGK3 116 aa15.07■□□□□ 0
PVT1-212ENST00000521951 M0R378 163 aa15.07■□□□□ 0
PVT1-212ENST00000521951 TAL2Q16559 108 aa15.05■□□□□ -0
PVT1-212ENST00000521951 TRBV10-2A0A0K0K1G8 114 aa15.04■□□□□ -0
PVT1-212ENST00000521951 HNRNPA3P51991 378 aaKnown RBP15.04■□□□□ -0
PVT1-212ENST00000521951 KRTAP11-1Q8IUC1 163 aa15.04■□□□□ -0
PVT1-212ENST00000521951 RPL37AP8A6NKH3 93 aa15.03■□□□□ -0
PVT1-212ENST00000521951 UBE2BP63146 152 aa15.03■□□□□ -0
PVT1-212ENST00000521951 LINC00528Q8N1L1 170 aa15.03■□□□□ -0
PVT1-212ENST00000521951 IGKV2-28A0A075B6P5 120 aa15.02■□□□□ -0
PVT1-212ENST00000521951 TSTD3H0UI37 97 aa15.02■□□□□ -0
PVT1-212ENST00000521951 IGKV2D-28P01615 120 aa15.02■□□□□ -0
PVT1-212ENST00000521951 A4D1N5 150 aa15.02□□□□□ -0.01
PVT1-212ENST00000521951 IGLV1-50A0A075B6I6 118 aa15□□□□□ -0.01
PVT1-212ENST00000521951 CEND1Q8N111 149 aa15□□□□□ -0.01
PVT1-212ENST00000521951 HSD52Q0P140 79 aa14.99□□□□□ -0.01
PVT1-212ENST00000521951 TRBV10-3A0A0K0K1G6 114 aa14.97□□□□□ -0.01
PVT1-212ENST00000521951 LINC00337Q8N6G1 96 aa14.97□□□□□ -0.01
PVT1-212ENST00000521951 KRTAP17-1Q9BYP8 105 aa14.97□□□□□ -0.01
PVT1-212ENST00000521951 FAT1Q14517 4588 aa14.97□□□□□ -0.01
PVT1-212ENST00000521951 PSORS1C2Q9UIG4 136 aa14.97□□□□□ -0.01
PVT1-212ENST00000521951 DDTP30046 118 aa14.96□□□□□ -0.02
PVT1-212ENST00000521951 S100A7L2Q5SY68 101 aa14.96□□□□□ -0.02
PVT1-212ENST00000521951 IGLV6-57P01721 117 aa14.95□□□□□ -0.02
PVT1-212ENST00000521951 OR13C6PQ8NH95 151 aa14.95□□□□□ -0.02
PVT1-212ENST00000521951 FAM229AH3BQW9 127 aa14.93□□□□□ -0.02
PVT1-212ENST00000521951 FXYD2P54710 66 aa14.93□□□□□ -0.02
PVT1-212ENST00000521951 RPL37AP61513 92 aaKnown RBP14.93□□□□□ -0.02
PVT1-212ENST00000521951 CTAG1AP78358 180 aa14.92□□□□□ -0.02
PVT1-212ENST00000521951 Q8N1X5 172 aa14.92□□□□□ -0.02
PVT1-212ENST00000521951 VPS13BQ7Z7G8 4022 aa14.92□□□□□ -0.02
PVT1-212ENST00000521951 TMEM126AQ9H061 195 aa14.92□□□□□ -0.02
PVT1-212ENST00000521951 KCNQ1DNQ9H478 68 aa14.91□□□□□ -0.02
PVT1-212ENST00000521951 TRAV13-2A0A0B4J235 113 aa14.9□□□□□ -0.02
PVT1-212ENST00000521951 A6NDN8 102 aa14.9□□□□□ -0.02
PVT1-212ENST00000521951 Q5VSD8 79 aa14.9□□□□□ -0.02
PVT1-212ENST00000521951 CFC1BP0CG36 223 aa14.89□□□□□ -0.03
PVT1-212ENST00000521951 CFC1P0CG37 223 aa14.89□□□□□ -0.03
PVT1-212ENST00000521951 C1orf137Q5JT78 98 aa14.89□□□□□ -0.03
PVT1-212ENST00000521951 TMEM238LA0A1B0GVL6 79 aa14.88□□□□□ -0.03
PVT1-212ENST00000521951 A6NJY4 79 aa14.88□□□□□ -0.03
PVT1-212ENST00000521951 PRYO14603 147 aa14.88□□□□□ -0.03
PVT1-212ENST00000521951 REG3GQ6UW15 175 aa14.88□□□□□ -0.03
PVT1-212ENST00000521951 KRTAP10-4P60372 401 aaPredicted RBP14.87□□□□□ -0.03
PVT1-212ENST00000521951 PLA2G1BP04054 148 aaKnown RBP14.87□□□□□ -0.03
PVT1-212ENST00000521951 BVES-AS1Q5T3Y7 98 aa14.86□□□□□ -0.03
PVT1-212ENST00000521951 TRAV23DV6A0A075B6W5 121 aa14.85□□□□□ -0.03
PVT1-212ENST00000521951 A0A0B4J2C4 111 aa14.84□□□□□ -0.03
PVT1-212ENST00000521951 BCE1O60756 84 aa14.84□□□□□ -0.03
PVT1-212ENST00000521951 SPRR1AP35321 89 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms