RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 IGKV2D-26A0A0A0MRZ7 120 aa11.53□□□□□ -0.56
CERNA3-201ENST00000521403 LINC00304Q8N9R0 145 aa11.53□□□□□ -0.56
CERNA3-201ENST00000521403 RETNLBQ9BQ08 111 aa11.52□□□□□ -0.57
CERNA3-201ENST00000521403 SFTA2Q6UW10 78 aa11.51□□□□□ -0.57
CERNA3-201ENST00000521403 Q8NDZ9 215 aa11.51□□□□□ -0.57
CERNA3-201ENST00000521403 M0R378 163 aa11.5□□□□□ -0.57
CERNA3-201ENST00000521403 CBLN2Q8IUK8 224 aa11.5□□□□□ -0.57
CERNA3-201ENST00000521403 LINC00158P58513 81 aa11.49□□□□□ -0.57
CERNA3-201ENST00000521403 SLC7A5P1Q8MH63 180 aa11.48□□□□□ -0.57
CERNA3-201ENST00000521403 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
CERNA3-201ENST00000521403 A0A0U1RQV1 116 aa11.47□□□□□ -0.57
CERNA3-201ENST00000521403 A0A0U1RRA0 63 aa11.47□□□□□ -0.57
CERNA3-201ENST00000521403 HIGD2AQ9BW72 106 aa11.47□□□□□ -0.57
CERNA3-201ENST00000521403 PLEKHB2Q96CS7 222 aa11.45□□□□□ -0.58
CERNA3-201ENST00000521403 TMEM223A0PJW6 202 aa11.43□□□□□ -0.58
CERNA3-201ENST00000521403 C3orf22Q8N5N4 141 aa11.42□□□□□ -0.58
CERNA3-201ENST00000521403 IFI27L1Q96BM0 104 aa11.42□□□□□ -0.58
CERNA3-201ENST00000521403 ATP6V1G1O75348 118 aa11.41□□□□□ -0.58
CERNA3-201ENST00000521403 SMIM13P0DJ93 91 aa11.4□□□□□ -0.58
CERNA3-201ENST00000521403 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.58
CERNA3-201ENST00000521403 CHCHD1Q96BP2 118 aaKnown RBP11.4□□□□□ -0.58
CERNA3-201ENST00000521403 CDIP1Q9H305 208 aa11.4□□□□□ -0.58
CERNA3-201ENST00000521403 IGLV7-46A0A075B6I9 117 aa11.39□□□□□ -0.59
CERNA3-201ENST00000521403 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
CERNA3-201ENST00000521403 BOD1L2Q8IYS8 172 aa11.38□□□□□ -0.59
CERNA3-201ENST00000521403 NCR3O14931 201 aa11.37□□□□□ -0.59
CERNA3-201ENST00000521403 SPRR4Q96PI1 79 aa11.37□□□□□ -0.59
CERNA3-201ENST00000521403 TRGC2P03986 189 aa11.36□□□□□ -0.59
CERNA3-201ENST00000521403 CTAG1AP78358 180 aa11.36□□□□□ -0.59
CERNA3-201ENST00000521403 TPRXLQ17RH7 258 aa11.36□□□□□ -0.59
CERNA3-201ENST00000521403 MIR7-3HGQ8N6C7 128 aa11.36□□□□□ -0.59
CERNA3-201ENST00000521403 ZNF706Q9Y5V0 76 aaPredicted RBP11.36□□□□□ -0.59
CERNA3-201ENST00000521403 PRYO14603 147 aa11.35□□□□□ -0.59
CERNA3-201ENST00000521403 HERV-K104P63124 156 aa11.34□□□□□ -0.59
CERNA3-201ENST00000521403 SPAG11AQ6PDA7 123 aa11.34□□□□□ -0.59
CERNA3-201ENST00000521403 FAM19A2Q8N3H0 131 aa11.34□□□□□ -0.59
CERNA3-201ENST00000521403 H0Y8G0 127 aa11.33□□□□□ -0.6
CERNA3-201ENST00000521403 HSBP1O75506 76 aa11.33□□□□□ -0.6
CERNA3-201ENST00000521403 LINC00310P59036 64 aa11.33□□□□□ -0.6
CERNA3-201ENST00000521403 NDUFA12Q9UI09 145 aa11.33□□□□□ -0.6
CERNA3-201ENST00000521403 MUC17Q685J3 4493 aa11.32□□□□□ -0.6
CERNA3-201ENST00000521403 C4orf48Q5BLP8 95 aa11.32□□□□□ -0.6
CERNA3-201ENST00000521403 PPDPFQ9H3Y8 114 aa11.32□□□□□ -0.6
CERNA3-201ENST00000521403 ETDCA0A1B0GVM5 59 aa11.31□□□□□ -0.6
CERNA3-201ENST00000521403 LINC00587B1AMM8 73 aa11.31□□□□□ -0.6
CERNA3-201ENST00000521403 LINC00337Q8N6G1 96 aa11.31□□□□□ -0.6
CERNA3-201ENST00000521403 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
CERNA3-201ENST00000521403 COLCA2A8K830 154 aa11.3□□□□□ -0.6
CERNA3-201ENST00000521403 SPRR1AP35321 89 aa11.3□□□□□ -0.6
CERNA3-201ENST00000521403 SMCR5Q8TEV8 140 aa11.3□□□□□ -0.6
CERNA3-201ENST00000521403 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
CERNA3-201ENST00000521403 KCNQ1DNQ9H478 68 aa11.3□□□□□ -0.6
CERNA3-201ENST00000521403 TRBV10-3A0A0K0K1G6 114 aa11.29□□□□□ -0.6
CERNA3-201ENST00000521403 DAND5Q8N907 189 aa11.29□□□□□ -0.6
CERNA3-201ENST00000521403 FAT4Q6V0I7 4981 aa11.29□□□□□ -0.6
CERNA3-201ENST00000521403 SERF1AO75920 110 aa11.28□□□□□ -0.6
CERNA3-201ENST00000521403 Q8NBF4 154 aa11.28□□□□□ -0.6
CERNA3-201ENST00000521403 S100A12P80511 92 aa11.27□□□□□ -0.61
CERNA3-201ENST00000521403 KRTAP4-16G5E9R7 235 aaPredicted RBP11.26□□□□□ -0.61
CERNA3-201ENST00000521403 TSPEAR-AS2P59090 65 aa11.25□□□□□ -0.61
CERNA3-201ENST00000521403 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
CERNA3-201ENST00000521403 FP248Q71RG6 208 aaPredicted RBP11.24□□□□□ -0.61
CERNA3-201ENST00000521403 LEPROTO15243 131 aa11.23□□□□□ -0.61
CERNA3-201ENST00000521403 GAGE2AQ6NT46 116 aa11.23□□□□□ -0.61
CERNA3-201ENST00000521403 LCE2AQ5TA79 106 aaPredicted RBP11.22□□□□□ -0.61
CERNA3-201ENST00000521403 B5MCH6 92 aa11.21□□□□□ -0.61
CERNA3-201ENST00000521403 PLNP26678 52 aa11.21□□□□□ -0.61
CERNA3-201ENST00000521403 DDTP30046 118 aa11.21□□□□□ -0.61
CERNA3-201ENST00000521403 LINC00483Q53H64 154 aa11.21□□□□□ -0.61
CERNA3-201ENST00000521403 MIEN1Q9BRT3 115 aa11.2□□□□□ -0.62
CERNA3-201ENST00000521403 IGLV9-49A0A0B4J1Y8 123 aa11.19□□□□□ -0.62
CERNA3-201ENST00000521403 J3QQQ9 107 aa11.19□□□□□ -0.62
CERNA3-201ENST00000521403 ERC2-IT1O76042 136 aa11.19□□□□□ -0.62
CERNA3-201ENST00000521403 SPINK1P00995 79 aa11.19□□□□□ -0.62
CERNA3-201ENST00000521403 FABP4P15090 132 aa11.19□□□□□ -0.62
CERNA3-201ENST00000521403 HERVK_113P61574 105 aa11.19□□□□□ -0.62
CERNA3-201ENST00000521403 HSPB8Q9UJY1 196 aa11.19□□□□□ -0.62
CERNA3-201ENST00000521403 LOC107984156A0A0G2JMH3 177 aa11.18□□□□□ -0.62
CERNA3-201ENST00000521403 TRBV10-2A0A0K0K1G8 114 aa11.18□□□□□ -0.62
CERNA3-201ENST00000521403 DPM2O94777 84 aa11.18□□□□□ -0.62
CERNA3-201ENST00000521403 LGALS3P17931 250 aaKnown RBP11.18□□□□□ -0.62
CERNA3-201ENST00000521403 MOBPQ13875 183 aa11.18□□□□□ -0.62
CERNA3-201ENST00000521403 ARL17AQ8IVW1 177 aa11.18□□□□□ -0.62
CERNA3-201ENST00000521403 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
CERNA3-201ENST00000521403 KRTAP9-2Q9BYQ4 174 aa11.17□□□□□ -0.62
CERNA3-201ENST00000521403 SPANXB1Q9NS25 103 aaPredicted RBP11.17□□□□□ -0.62
CERNA3-201ENST00000521403 NMUP48645 174 aa11.16□□□□□ -0.62
CERNA3-201ENST00000521403 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
CERNA3-201ENST00000521403 S100A7L2Q5SY68 101 aa11.16□□□□□ -0.62
CERNA3-201ENST00000521403 Q9BRP9 147 aa11.16□□□□□ -0.62
CERNA3-201ENST00000521403 IGKCP01834 107 aa11.15□□□□□ -0.62
CERNA3-201ENST00000521403 Q6ZRX8 168 aa11.15□□□□□ -0.62
CERNA3-201ENST00000521403 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 NDUFC2O95298 119 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 NPC2P61916 151 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms