RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 TRAV8-4A0A0B4J246 113 aa8.04□□□□□ -1.12
TRAPPC9-206ENST00000519482 REG3AQ06141 175 aa8.04□□□□□ -1.12
TRAPPC9-206ENST00000519482 CLPSL2Q6UWE3 100 aa8.04□□□□□ -1.12
TRAPPC9-206ENST00000519482 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
TRAPPC9-206ENST00000519482 LITAFQ99732 161 aa8.04□□□□□ -1.12
TRAPPC9-206ENST00000519482 PRO1854Q9UHT4 67 aa8.04□□□□□ -1.12
TRAPPC9-206ENST00000519482 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
TRAPPC9-206ENST00000519482 K7EP34 96 aa8.03□□□□□ -1.12
TRAPPC9-206ENST00000519482 CFC1BP0CG36 223 aa8.03□□□□□ -1.12
TRAPPC9-206ENST00000519482 CFC1P0CG37 223 aa8.03□□□□□ -1.12
TRAPPC9-206ENST00000519482 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
TRAPPC9-206ENST00000519482 COX7B2Q8TF08 81 aa8.03□□□□□ -1.12
TRAPPC9-206ENST00000519482 ZNF625Q96I27 306 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC9-206ENST00000519482 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
TRAPPC9-206ENST00000519482 FAT3Q8TDW7 4589 aa8.02□□□□□ -1.13
TRAPPC9-206ENST00000519482 A4D1N5 150 aa8.02□□□□□ -1.13
TRAPPC9-206ENST00000519482 K7ERJ3 54 aa8.02□□□□□ -1.13
TRAPPC9-206ENST00000519482 CD164L2Q6UWJ8 174 aa8.02□□□□□ -1.13
TRAPPC9-206ENST00000519482 SPCS1Q9Y6A9 102 aa8.02□□□□□ -1.13
TRAPPC9-206ENST00000519482 IGLV10-54A0A075B6I4 117 aa8.01□□□□□ -1.13
TRAPPC9-206ENST00000519482 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
TRAPPC9-206ENST00000519482 PKHD1L1Q86WI1 4243 aa8□□□□□ -1.13
TRAPPC9-206ENST00000519482 IGKV3OR2-268A0A0C4DH90 116 aa8□□□□□ -1.13
TRAPPC9-206ENST00000519482 APOMO95445 188 aa8□□□□□ -1.13
TRAPPC9-206ENST00000519482 OXTP01178 125 aa8□□□□□ -1.13
TRAPPC9-206ENST00000519482 CNBPP62633 177 aaKnown RBP8□□□□□ -1.13
TRAPPC9-206ENST00000519482 ERG28Q9UKR5 140 aa8□□□□□ -1.13
TRAPPC9-206ENST00000519482 TRBV20-1A0A075B6N2 111 aa7.99□□□□□ -1.13
TRAPPC9-206ENST00000519482 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
TRAPPC9-206ENST00000519482 C6orf226Q5I0X4 101 aa7.99□□□□□ -1.13
TRAPPC9-206ENST00000519482 SDIM1Q6ZPB5 146 aa7.99□□□□□ -1.13
TRAPPC9-206ENST00000519482 COX7A2LO14548 114 aa7.98□□□□□ -1.13
TRAPPC9-206ENST00000519482 MEIG1Q5JSS6 88 aa7.98□□□□□ -1.13
TRAPPC9-206ENST00000519482 C5orf38Q86SI9 138 aa7.98□□□□□ -1.13
TRAPPC9-206ENST00000519482 Q8IZM0 81 aa7.98□□□□□ -1.13
TRAPPC9-206ENST00000519482 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC9-206ENST00000519482 F8W1H4 67 aa7.97□□□□□ -1.13
TRAPPC9-206ENST00000519482 CXCL5P42830 114 aa7.97□□□□□ -1.13
TRAPPC9-206ENST00000519482 XCL1P47992 114 aa7.97□□□□□ -1.13
TRAPPC9-206ENST00000519482 LINC00308Q8TCZ7 52 aa7.97□□□□□ -1.13
TRAPPC9-206ENST00000519482 CHCHD10Q8WYQ3 142 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC9-206ENST00000519482 TSPAN13O95857 204 aa7.96□□□□□ -1.14
TRAPPC9-206ENST00000519482 NAA38Q9BRA0 125 aaKnown RBP7.96□□□□□ -1.14
TRAPPC9-206ENST00000519482 PANO1I0J062 215 aa7.95□□□□□ -1.14
TRAPPC9-206ENST00000519482 SCGB1C2P0DMR2 95 aa7.95□□□□□ -1.14
TRAPPC9-206ENST00000519482 SERTAD4-AS1Q5TG53 156 aa7.95□□□□□ -1.14
TRAPPC9-206ENST00000519482 CFAP161Q6P656 301 aa7.95□□□□□ -1.14
TRAPPC9-206ENST00000519482 TOMM7Q9P0U1 55 aa7.95□□□□□ -1.14
TRAPPC9-206ENST00000519482 TRBV30A0A0K0K1B3 111 aa7.94□□□□□ -1.14
TRAPPC9-206ENST00000519482 SLPIP03973 132 aa7.94□□□□□ -1.14
TRAPPC9-206ENST00000519482 COX6CP09669 75 aa7.94□□□□□ -1.14
TRAPPC9-206ENST00000519482 MALP21145 153 aa7.94□□□□□ -1.14
TRAPPC9-206ENST00000519482 COX17Q14061 63 aa7.94□□□□□ -1.14
TRAPPC9-206ENST00000519482 LOC107984156A0A0G2JMH3 177 aa7.93□□□□□ -1.14
TRAPPC9-206ENST00000519482 GAGE12HA6NDE8 117 aa7.93□□□□□ -1.14
TRAPPC9-206ENST00000519482 LINC00158P58513 81 aa7.93□□□□□ -1.14
TRAPPC9-206ENST00000519482 CKS1BP61024 79 aa7.93□□□□□ -1.14
TRAPPC9-206ENST00000519482 ARL17AQ8IVW1 177 aa7.93□□□□□ -1.14
TRAPPC9-206ENST00000519482 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
TRAPPC9-206ENST00000519482 PSMB2P49721 201 aa7.92□□□□□ -1.14
TRAPPC9-206ENST00000519482 FOXI1Q12951 378 aa7.92□□□□□ -1.14
TRAPPC9-206ENST00000519482 HMCN2Q8NDA2 5059 aa7.91□□□□□ -1.14
TRAPPC9-206ENST00000519482 TRAV13-2A0A0B4J235 113 aa7.91□□□□□ -1.14
TRAPPC9-206ENST00000519482 KIAA0087Q14695 138 aa7.91□□□□□ -1.14
TRAPPC9-206ENST00000519482 SPACA4Q8TDM5 124 aa7.91□□□□□ -1.14
TRAPPC9-206ENST00000519482 DPH3Q96FX2 82 aa7.91□□□□□ -1.14
TRAPPC9-206ENST00000519482 A0A087WYN8 130 aa7.9□□□□□ -1.14
TRAPPC9-206ENST00000519482 F8WDY8 70 aa7.9□□□□□ -1.14
TRAPPC9-206ENST00000519482 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC9-206ENST00000519482 Q1RN00 199 aa7.9□□□□□ -1.14
TRAPPC9-206ENST00000519482 GVQW2A0A096LPI5 108 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC9-206ENST00000519482 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
TRAPPC9-206ENST00000519482 MIR7-3HGQ8N6C7 128 aa7.89□□□□□ -1.15
TRAPPC9-206ENST00000519482 PLAC8Q9NZF1 115 aa7.89□□□□□ -1.15
TRAPPC9-206ENST00000519482 A0A0U1RRA0 63 aa7.88□□□□□ -1.15
TRAPPC9-206ENST00000519482 H3BMG7 143 aa7.88□□□□□ -1.15
TRAPPC9-206ENST00000519482 HIGD2BQ4VC39 106 aa7.88□□□□□ -1.15
TRAPPC9-206ENST00000519482 Q6ZRU5 148 aa7.88□□□□□ -1.15
TRAPPC9-206ENST00000519482 DAND5Q8N907 189 aa7.88□□□□□ -1.15
TRAPPC9-206ENST00000519482 K7ERU9 68 aa7.87□□□□□ -1.15
TRAPPC9-206ENST00000519482 M0QXV9 152 aa7.87□□□□□ -1.15
TRAPPC9-206ENST00000519482 NPC2P61916 151 aa7.87□□□□□ -1.15
TRAPPC9-206ENST00000519482 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
TRAPPC9-206ENST00000519482 SOSTDC1Q6X4U4 206 aa7.87□□□□□ -1.15
TRAPPC9-206ENST00000519482 SND1-IT1Q9HBX3 110 aa7.87□□□□□ -1.15
TRAPPC9-206ENST00000519482 H7C2G1 150 aa7.86□□□□□ -1.15
TRAPPC9-206ENST00000519482 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
TRAPPC9-206ENST00000519482 PKIGQ9Y2B9 76 aa7.86□□□□□ -1.15
TRAPPC9-206ENST00000519482 NDUFC2O95298 119 aa7.85□□□□□ -1.15
TRAPPC9-206ENST00000519482 TCL1BO95988 128 aa7.85□□□□□ -1.15
TRAPPC9-206ENST00000519482 PFN2P35080 140 aa7.85□□□□□ -1.15
TRAPPC9-206ENST00000519482 RPL13AP40429 203 aaKnown RBP7.85□□□□□ -1.15
TRAPPC9-206ENST00000519482 OCIAD2Q56VL3 154 aa7.85□□□□□ -1.15
TRAPPC9-206ENST00000519482 LINC01600Q96MT4 127 aa7.85□□□□□ -1.15
TRAPPC9-206ENST00000519482 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
TRAPPC9-206ENST00000519482 TRIAP1O43715 76 aa7.84□□□□□ -1.15
TRAPPC9-206ENST00000519482 SPAG11BQ08648 103 aa7.84□□□□□ -1.15
TRAPPC9-206ENST00000519482 PLA2G2DQ9UNK4 145 aa7.84□□□□□ -1.15
TRAPPC9-206ENST00000519482 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
TRAPPC9-206ENST00000519482 J3QR89 54 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 233.9 ms