RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
TFF3-204ENST00000518498 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
TFF3-204ENST00000518498 C6orf48Q9UBA6 75 aa11.59□□□□□ -0.55
TFF3-204ENST00000518498 TMEM238C9JI98 176 aa11.58□□□□□ -0.56
TFF3-204ENST00000518498 HNRNPA3P51991 378 aaKnown RBP11.58□□□□□ -0.56
TFF3-204ENST00000518498 HIGD1BQ9P298 99 aa11.58□□□□□ -0.56
TFF3-204ENST00000518498 SLPIP03973 132 aa11.57□□□□□ -0.56
TFF3-204ENST00000518498 HMCN2Q8NDA2 5059 aa11.57□□□□□ -0.56
TFF3-204ENST00000518498 LINC00158P58513 81 aa11.56□□□□□ -0.56
TFF3-204ENST00000518498 Q6ZVH6 145 aa11.55□□□□□ -0.56
TFF3-204ENST00000518498 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.55□□□□□ -0.56
TFF3-204ENST00000518498 FAT3Q8TDW7 4589 aa11.55□□□□□ -0.56
TFF3-204ENST00000518498 TLX1NBP0CAT3 122 aa11.54□□□□□ -0.56
TFF3-204ENST00000518498 SMIM13P0DJ93 91 aa11.54□□□□□ -0.56
TFF3-204ENST00000518498 PFN2P35080 140 aa11.54□□□□□ -0.56
TFF3-204ENST00000518498 SDIM1Q6ZPB5 146 aa11.54□□□□□ -0.56
TFF3-204ENST00000518498 COPS9Q8WXC6 57 aa11.54□□□□□ -0.56
TFF3-204ENST00000518498 SPANXB1Q9NS25 103 aaPredicted RBP11.54□□□□□ -0.56
TFF3-204ENST00000518498 LOC107984640A0A0U1RRK4 108 aa11.53□□□□□ -0.56
TFF3-204ENST00000518498 NDUFC2-KCTD14E9PQ53 114 aa11.53□□□□□ -0.56
TFF3-204ENST00000518498 C9orf116Q5BN46 136 aaPredicted RBP11.53□□□□□ -0.56
TFF3-204ENST00000518498 SPANXDQ9BXN6 97 aa11.52□□□□□ -0.57
TFF3-204ENST00000518498 SPANXCQ9NY87 97 aa11.52□□□□□ -0.57
TFF3-204ENST00000518498 PANO1I0J062 215 aa11.51□□□□□ -0.57
TFF3-204ENST00000518498 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
TFF3-204ENST00000518498 C2orf91Q6ZV80 131 aa11.51□□□□□ -0.57
TFF3-204ENST00000518498 DPH3Q96FX2 82 aa11.51□□□□□ -0.57
TFF3-204ENST00000518498 LITAFQ99732 161 aa11.51□□□□□ -0.57
TFF3-204ENST00000518498 TP73-AS1Q9UF72 201 aa11.51□□□□□ -0.57
TFF3-204ENST00000518498 UBR4Q5T4S7 5183 aa11.51□□□□□ -0.57
TFF3-204ENST00000518498 A0A0U1RRA0 63 aa11.5□□□□□ -0.57
TFF3-204ENST00000518498 IFITM1P13164 125 aa11.5□□□□□ -0.57
TFF3-204ENST00000518498 TAL2Q16559 108 aa11.5□□□□□ -0.57
TFF3-204ENST00000518498 MIR7-3HGQ8N6C7 128 aa11.5□□□□□ -0.57
TFF3-204ENST00000518498 MT1HL1P0DM35 61 aa11.49□□□□□ -0.57
TFF3-204ENST00000518498 HIST1H4GQ99525 98 aa11.49□□□□□ -0.57
TFF3-204ENST00000518498 PTTG1IPP53801 180 aa11.48□□□□□ -0.57
TFF3-204ENST00000518498 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
TFF3-204ENST00000518498 ADAMTSL4-AS1Q5T5F5 129 aa11.48□□□□□ -0.57
TFF3-204ENST00000518498 PPDPFQ9H3Y8 114 aa11.48□□□□□ -0.57
TFF3-204ENST00000518498 HSD52Q0P140 79 aa11.47□□□□□ -0.57
TFF3-204ENST00000518498 DDTP30046 118 aa11.46□□□□□ -0.57
TFF3-204ENST00000518498 Q6ZRP5 223 aa11.46□□□□□ -0.57
TFF3-204ENST00000518498 DAND5Q8N907 189 aa11.45□□□□□ -0.58
TFF3-204ENST00000518498 SND1-IT1Q9HBX3 110 aa11.45□□□□□ -0.58
TFF3-204ENST00000518498 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
TFF3-204ENST00000518498 PKHD1L1Q86WI1 4243 aa11.45□□□□□ -0.58
TFF3-204ENST00000518498 LOC107984156A0A0G2JMH3 177 aa11.44□□□□□ -0.58
TFF3-204ENST00000518498 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
TFF3-204ENST00000518498 ARL17AQ8IVW1 177 aa11.44□□□□□ -0.58
TFF3-204ENST00000518498 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
TFF3-204ENST00000518498 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
TFF3-204ENST00000518498 RPL24P83731 157 aaKnown RBP11.43□□□□□ -0.58
TFF3-204ENST00000518498 GAGE2BQ13066 116 aa11.43□□□□□ -0.58
TFF3-204ENST00000518498 A0A087WYN8 130 aa11.42□□□□□ -0.58
TFF3-204ENST00000518498 MUSTN1Q8IVN3 82 aa11.42□□□□□ -0.58
TFF3-204ENST00000518498 CEND1Q8N111 149 aa11.41□□□□□ -0.58
TFF3-204ENST00000518498 A0A096LNI7 61 aa11.4□□□□□ -0.58
TFF3-204ENST00000518498 TMEM238LA0A1B0GVL6 79 aa11.4□□□□□ -0.58
TFF3-204ENST00000518498 A6NJY4 79 aa11.4□□□□□ -0.58
TFF3-204ENST00000518498 M0R143 59 aa11.4□□□□□ -0.58
TFF3-204ENST00000518498 NPC2P61916 151 aa11.4□□□□□ -0.58
TFF3-204ENST00000518498 CTAG1AP78358 180 aa11.4□□□□□ -0.58
TFF3-204ENST00000518498 XAGE1AQ9HD64 81 aa11.4□□□□□ -0.58
TFF3-204ENST00000518498 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
TFF3-204ENST00000518498 SPACA4Q8TDM5 124 aa11.39□□□□□ -0.59
TFF3-204ENST00000518498 IGKV2-24A0A0C4DH68 120 aa11.38□□□□□ -0.59
TFF3-204ENST00000518498 NDUFC2O95298 119 aa11.38□□□□□ -0.59
TFF3-204ENST00000518498 SOSTDC1Q6X4U4 206 aa11.38□□□□□ -0.59
TFF3-204ENST00000518498 C9orf129Q5T035 196 aaKnown RBP11.37□□□□□ -0.59
TFF3-204ENST00000518498 C7orf33Q8WU49 177 aa11.37□□□□□ -0.59
TFF3-204ENST00000518498 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
TFF3-204ENST00000518498 PCP4L1A6NKN8 68 aa11.36□□□□□ -0.59
TFF3-204ENST00000518498 A4D1N5 150 aa11.34□□□□□ -0.59
TFF3-204ENST00000518498 EIF4EBP3O60516 100 aaPredicted RBP11.33□□□□□ -0.6
TFF3-204ENST00000518498 BVES-AS1Q5T3Y7 98 aa11.33□□□□□ -0.6
TFF3-204ENST00000518498 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
TFF3-204ENST00000518498 VPREB1P12018 145 aa11.32□□□□□ -0.6
TFF3-204ENST00000518498 HINT1P49773 126 aaPredicted RBP11.32□□□□□ -0.6
TFF3-204ENST00000518498 FXYD2P54710 66 aa11.32□□□□□ -0.6
TFF3-204ENST00000518498 NKAPP1Q8N9T2 125 aa11.32□□□□□ -0.6
TFF3-204ENST00000518498 LINC01600Q96MT4 127 aa11.32□□□□□ -0.6
TFF3-204ENST00000518498 IGLV5-37A0A075B6J1 123 aa11.31□□□□□ -0.6
TFF3-204ENST00000518498 A6NDN8 102 aa11.3□□□□□ -0.6
TFF3-204ENST00000518498 TRAV13-2A0A0B4J235 113 aa11.29□□□□□ -0.6
TFF3-204ENST00000518498 M0R378 163 aa11.29□□□□□ -0.6
TFF3-204ENST00000518498 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
TFF3-204ENST00000518498 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
TFF3-204ENST00000518498 RAB37Q96AX2 223 aa11.28□□□□□ -0.6
TFF3-204ENST00000518498 FAM168BA1KXE4 195 aa11.27□□□□□ -0.61
TFF3-204ENST00000518498 PRR3P79522 188 aaKnown RBP11.27□□□□□ -0.61
TFF3-204ENST00000518498 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
TFF3-204ENST00000518498 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.61
TFF3-204ENST00000518498 CBY1Q9Y3M2 126 aa11.27□□□□□ -0.61
TFF3-204ENST00000518498 A0A1W2PNN7 141 aa11.26□□□□□ -0.61
TFF3-204ENST00000518498 NCR3O14931 201 aa11.26□□□□□ -0.61
TFF3-204ENST00000518498 CFC1BP0CG36 223 aa11.26□□□□□ -0.61
TFF3-204ENST00000518498 CFC1P0CG37 223 aa11.26□□□□□ -0.61
TFF3-204ENST00000518498 Q8NDZ9 215 aa11.26□□□□□ -0.61
TFF3-204ENST00000518498 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms