RNA–Protein interactions for RNA: ENST00000516201.1

SCARNA5-201, small Cajal body-specific RNA 5, humanhuman

BASIC

Gene SCARNA5, Length 276 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA5-201ENST00000516201 FAT1Q14517 4588 aa4.16□□□□□ -1.74
SCARNA5-201ENST00000516201 TMEM238C9JI98 176 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 VPREB1P12018 145 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 IFITM1P13164 125 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 PFN2P35080 140 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 XGP55808 180 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 LINC00158P58513 81 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 S100A12P80511 92 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 GAGE2BQ13066 116 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 SLC25A34Q6PIV7 304 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 SOSTDC1Q6X4U4 206 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 Q8NDZ9 215 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 TP73-AS1Q9UF72 201 aa4.15□□□□□ -1.75
SCARNA5-201ENST00000516201 A0A087WYN8 130 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 IGKV2-24A0A0C4DH68 120 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 A0A1W2PNN7 141 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 EIF4EBP3O60516 100 aaPredicted RBP4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 NDUFC2O95298 119 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 GAGE2EQ4V326 116 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 SERTAD4-AS1Q5TG53 156 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 SCGB1D4Q6XE38 83 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 SCXQ7RTU7 201 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 LINC00518Q8N0U6 118 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 CIRBP-AS1Q8TBR5 109 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 LINC00308Q8TCZ7 52 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 C14orf144Q96I85 54 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 XAGE1AQ9HD64 81 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 UQCR10Q9UDW1 63 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 GAGE2DQ9UEU5 116 aa4.14□□□□□ -1.75
SCARNA5-201ENST00000516201 DAND5Q8N907 189 aa4.13□□□□□ -1.75
SCARNA5-201ENST00000516201 COPS9Q8WXC6 57 aa4.13□□□□□ -1.75
SCARNA5-201ENST00000516201 C12orf57Q99622 126 aa4.13□□□□□ -1.75
SCARNA5-201ENST00000516201 HERC2O95714 4834 aa4.12□□□□□ -1.75
SCARNA5-201ENST00000516201 TRBV10-2A0A0K0K1G8 114 aa4.12□□□□□ -1.75
SCARNA5-201ENST00000516201 A0A0U1RRA0 63 aa4.12□□□□□ -1.75
SCARNA5-201ENST00000516201 FAM168BA1KXE4 195 aa4.12□□□□□ -1.75
SCARNA5-201ENST00000516201 RPL24P83731 157 aaKnown RBP4.12□□□□□ -1.75
SCARNA5-201ENST00000516201 TAL2Q16559 108 aa4.12□□□□□ -1.75
SCARNA5-201ENST00000516201 MIEN1Q9BRT3 115 aa4.12□□□□□ -1.75
SCARNA5-201ENST00000516201 IGKV2-28A0A075B6P5 120 aa4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 M0QXV9 152 aa4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 M0R378 163 aa4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 IGKV2D-28P01615 120 aa4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 HSD52Q0P140 79 aa4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 FAM19A5Q7Z5A7 132 aaPredicted RBP4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 MRPL55Q7Z7F7 128 aaKnown RBP4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 MUSTN1Q8IVN3 82 aa4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 C7orf33Q8WU49 177 aa4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 C22orf24Q9Y442 160 aa4.1□□□□□ -1.75
SCARNA5-201ENST00000516201 IGLV6-57P01721 117 aa4.09□□□□□ -1.75
SCARNA5-201ENST00000516201 KRTAP10-4P60372 401 aaPredicted RBP4.09□□□□□ -1.75
SCARNA5-201ENST00000516201 SRSF9Q13242 221 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCARNA5-201ENST00000516201 LBHQ53QV2 105 aaPredicted RBP4.09□□□□□ -1.75
SCARNA5-201ENST00000516201 KRTAP11-1Q8IUC1 163 aa4.09□□□□□ -1.75
SCARNA5-201ENST00000516201 PRO1933Q9H354 126 aa4.09□□□□□ -1.75
SCARNA5-201ENST00000516201 FLG2Q5D862 2391 aaPredicted RBP4.09□□□□□ -1.76
SCARNA5-201ENST00000516201 IGLV1-50A0A075B6I6 118 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 A0A1B0GWB2 263 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 TSTD3H0UI37 97 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 SPRR1AP35321 89 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 HAMPP81172 84 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 C4orf48Q5BLP8 95 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 PHF5AQ7RTV0 110 aaKnown RBP4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 CEND1Q8N111 149 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 LINC00337Q8N6G1 96 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 NKAPP1Q8N9T2 125 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 LINC00167Q96N53 147 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 HIST1H4GQ99525 98 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 KCNQ1DNQ9H478 68 aa4.08□□□□□ -1.76
SCARNA5-201ENST00000516201 PKHD1L1Q86WI1 4243 aa4.07□□□□□ -1.76
SCARNA5-201ENST00000516201 A0A0B4J2C4 111 aa4.07□□□□□ -1.76
SCARNA5-201ENST00000516201 TRBV10-3A0A0K0K1G6 114 aa4.07□□□□□ -1.76
SCARNA5-201ENST00000516201 A4D1N5 150 aa4.07□□□□□ -1.76
SCARNA5-201ENST00000516201 FXYD2P54710 66 aa4.07□□□□□ -1.76
SCARNA5-201ENST00000516201 NPC2P61916 151 aa4.07□□□□□ -1.76
SCARNA5-201ENST00000516201 PRR3P79522 188 aaKnown RBP4.07□□□□□ -1.76
SCARNA5-201ENST00000516201 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
SCARNA5-201ENST00000516201 TRAV13-2A0A0B4J235 113 aa4.06□□□□□ -1.76
SCARNA5-201ENST00000516201 KRTAP4-16G5E9R7 235 aaPredicted RBP4.06□□□□□ -1.76
SCARNA5-201ENST00000516201 PRYO14603 147 aa4.06□□□□□ -1.76
SCARNA5-201ENST00000516201 NCR3O14931 201 aa4.06□□□□□ -1.76
SCARNA5-201ENST00000516201 KRTAP13-1Q8IUC0 172 aa4.06□□□□□ -1.76
SCARNA5-201ENST00000516201 LINC00528Q8N1L1 170 aa4.06□□□□□ -1.76
SCARNA5-201ENST00000516201 Q8N1X5 172 aa4.06□□□□□ -1.76
SCARNA5-201ENST00000516201 DPH3Q96FX2 82 aa4.06□□□□□ -1.76
SCARNA5-201ENST00000516201 TMEM238LA0A1B0GVL6 79 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 A6NJY4 79 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 CFC1P0CG37 223 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 DDTP30046 118 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 BVES-AS1Q5T3Y7 98 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 TMEM126AQ9H061 195 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 PSORS1C2Q9UIG4 136 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 CBY1Q9Y3M2 126 aa4.05□□□□□ -1.76
SCARNA5-201ENST00000516201 GAGE10A6NGK3 116 aa4.04□□□□□ -1.76
SCARNA5-201ENST00000516201 H0Y9J4 135 aa4.04□□□□□ -1.76
SCARNA5-201ENST00000516201 M0R143 59 aa4.04□□□□□ -1.76
SCARNA5-201ENST00000516201 BCE1O60756 84 aa4.04□□□□□ -1.76
SCARNA5-201ENST00000516201 UBE2BP63146 152 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms