RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ERG28Q9UKR5 140 aa7.09□□□□□ -1.27
SNHG4-208ENST00000514110 A0A0U1RQV1 116 aa7.08□□□□□ -1.28
SNHG4-208ENST00000514110 IFITM2Q01629 132 aa7.08□□□□□ -1.28
SNHG4-208ENST00000514110 COX19Q49B96 90 aa7.08□□□□□ -1.28
SNHG4-208ENST00000514110 FAM19A1Q7Z5A9 133 aa7.08□□□□□ -1.28
SNHG4-208ENST00000514110 URB1-AS1Q96HZ7 61 aa7.08□□□□□ -1.28
SNHG4-208ENST00000514110 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
SNHG4-208ENST00000514110 TMEM126AQ9H061 195 aa7.08□□□□□ -1.28
SNHG4-208ENST00000514110 IGKV2D-26A0A0A0MRZ7 120 aa7.06□□□□□ -1.28
SNHG4-208ENST00000514110 M0R378 163 aa7.06□□□□□ -1.28
SNHG4-208ENST00000514110 COX17Q14061 63 aa7.06□□□□□ -1.28
SNHG4-208ENST00000514110 PMCHL1Q16048 86 aa7.06□□□□□ -1.28
SNHG4-208ENST00000514110 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
SNHG4-208ENST00000514110 C11orf86A6NJI1 115 aa7.05□□□□□ -1.28
SNHG4-208ENST00000514110 ATP6V1G1O75348 118 aa7.05□□□□□ -1.28
SNHG4-208ENST00000514110 LINC00614P0C842 121 aa7.05□□□□□ -1.28
SNHG4-208ENST00000514110 RPL24P83731 157 aaKnown RBP7.05□□□□□ -1.28
SNHG4-208ENST00000514110 RPS10P5Q9NQ39 176 aa7.05□□□□□ -1.28
SNHG4-208ENST00000514110 HBDP02042 147 aa7.04□□□□□ -1.28
SNHG4-208ENST00000514110 COMMD7Q86VX2 200 aa7.04□□□□□ -1.28
SNHG4-208ENST00000514110 C3orf22Q8N5N4 141 aa7.04□□□□□ -1.28
SNHG4-208ENST00000514110 PLEKHB2Q96CS7 222 aa7.04□□□□□ -1.28
SNHG4-208ENST00000514110 C5orf52A6NGY3 159 aa7.03□□□□□ -1.28
SNHG4-208ENST00000514110 S100A12P80511 92 aa7.03□□□□□ -1.28
SNHG4-208ENST00000514110 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
SNHG4-208ENST00000514110 C10orf91Q5T1B1 145 aa7.03□□□□□ -1.28
SNHG4-208ENST00000514110 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
SNHG4-208ENST00000514110 BAGE3Q86Y29 109 aa7.03□□□□□ -1.28
SNHG4-208ENST00000514110 CBLN2Q8IUK8 224 aa7.03□□□□□ -1.28
SNHG4-208ENST00000514110 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
SNHG4-208ENST00000514110 RHEBQ15382 184 aa7.02□□□□□ -1.29
SNHG4-208ENST00000514110 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
SNHG4-208ENST00000514110 TRAPPC1Q9Y5R8 145 aa7.02□□□□□ -1.29
SNHG4-208ENST00000514110 HIGD2AQ9BW72 106 aa7.01□□□□□ -1.29
SNHG4-208ENST00000514110 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
SNHG4-208ENST00000514110 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
SNHG4-208ENST00000514110 A0A0U1RRA0 63 aa7□□□□□ -1.29
SNHG4-208ENST00000514110 LINC00158P58513 81 aa7□□□□□ -1.29
SNHG4-208ENST00000514110 SFTA2Q6UW10 78 aa7□□□□□ -1.29
SNHG4-208ENST00000514110 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
SNHG4-208ENST00000514110 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
SNHG4-208ENST00000514110 TMEM223A0PJW6 202 aa6.98□□□□□ -1.29
SNHG4-208ENST00000514110 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
SNHG4-208ENST00000514110 SMIM13P0DJ93 91 aa6.97□□□□□ -1.29
SNHG4-208ENST00000514110 LOC105371267A0A1B0GV96 52 aa6.96□□□□□ -1.3
SNHG4-208ENST00000514110 PRYO14603 147 aa6.95□□□□□ -1.3
SNHG4-208ENST00000514110 NCR3O14931 201 aa6.95□□□□□ -1.3
SNHG4-208ENST00000514110 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
SNHG4-208ENST00000514110 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
SNHG4-208ENST00000514110 TRAV12-1A0A0B4J245 112 aa6.94□□□□□ -1.3
SNHG4-208ENST00000514110 MIR7-3HGQ8N6C7 128 aa6.94□□□□□ -1.3
SNHG4-208ENST00000514110 DAND5Q8N907 189 aa6.94□□□□□ -1.3
SNHG4-208ENST00000514110 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
SNHG4-208ENST00000514110 ZNF706Q9Y5V0 76 aaPredicted RBP6.94□□□□□ -1.3
SNHG4-208ENST00000514110 PCP4L1A6NKN8 68 aa6.93□□□□□ -1.3
SNHG4-208ENST00000514110 KRTAP4-16G5E9R7 235 aaPredicted RBP6.93□□□□□ -1.3
SNHG4-208ENST00000514110 APOC3P02656 99 aa6.93□□□□□ -1.3
SNHG4-208ENST00000514110 SPRR1AP35321 89 aa6.93□□□□□ -1.3
SNHG4-208ENST00000514110 MEIG1Q5JSS6 88 aa6.93□□□□□ -1.3
SNHG4-208ENST00000514110 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
SNHG4-208ENST00000514110 Q8NBF4 154 aa6.93□□□□□ -1.3
SNHG4-208ENST00000514110 SMCR5Q8TEV8 140 aa6.93□□□□□ -1.3
SNHG4-208ENST00000514110 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
SNHG4-208ENST00000514110 FP248Q71RG6 208 aaPredicted RBP6.92□□□□□ -1.3
SNHG4-208ENST00000514110 CHCHD1Q96BP2 118 aaKnown RBP6.92□□□□□ -1.3
SNHG4-208ENST00000514110 TRBV10-3A0A0K0K1G6 114 aa6.91□□□□□ -1.3
SNHG4-208ENST00000514110 SNAPINO95295 136 aa6.91□□□□□ -1.3
SNHG4-208ENST00000514110 S100A1P23297 94 aa6.91□□□□□ -1.3
SNHG4-208ENST00000514110 HERV-K104P63124 156 aa6.91□□□□□ -1.3
SNHG4-208ENST00000514110 YPEL4Q96NS1 127 aa6.91□□□□□ -1.3
SNHG4-208ENST00000514110 NDUFA12Q9UI09 145 aa6.91□□□□□ -1.3
SNHG4-208ENST00000514110 ETDCA0A1B0GVM5 59 aa6.9□□□□□ -1.3
SNHG4-208ENST00000514110 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
SNHG4-208ENST00000514110 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
SNHG4-208ENST00000514110 LINC00483Q53H64 154 aa6.89□□□□□ -1.31
SNHG4-208ENST00000514110 SVBPQ8N300 66 aa6.89□□□□□ -1.31
SNHG4-208ENST00000514110 B5MCH6 92 aa6.88□□□□□ -1.31
SNHG4-208ENST00000514110 SPINK1P00995 79 aa6.88□□□□□ -1.31
SNHG4-208ENST00000514110 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
SNHG4-208ENST00000514110 GAGE2AQ6NT46 116 aa6.88□□□□□ -1.31
SNHG4-208ENST00000514110 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
SNHG4-208ENST00000514110 LINC00587B1AMM8 73 aa6.87□□□□□ -1.31
SNHG4-208ENST00000514110 ERC2-IT1O76042 136 aa6.87□□□□□ -1.31
SNHG4-208ENST00000514110 NDUFA5Q16718 116 aa6.87□□□□□ -1.31
SNHG4-208ENST00000514110 HSBP1O75506 76 aa6.86□□□□□ -1.31
SNHG4-208ENST00000514110 MAP1LC3CQ9BXW4 147 aa6.86□□□□□ -1.31
SNHG4-208ENST00000514110 IGLV9-49A0A0B4J1Y8 123 aa6.85□□□□□ -1.31
SNHG4-208ENST00000514110 LOC107984156A0A0G2JMH3 177 aa6.85□□□□□ -1.31
SNHG4-208ENST00000514110 DDTP30046 118 aa6.85□□□□□ -1.31
SNHG4-208ENST00000514110 MOBPQ13875 183 aa6.85□□□□□ -1.31
SNHG4-208ENST00000514110 ASB16-AS1Q495Z4 193 aa6.85□□□□□ -1.31
SNHG4-208ENST00000514110 ARL17AQ8IVW1 177 aa6.85□□□□□ -1.31
SNHG4-208ENST00000514110 Q9BRP9 147 aa6.85□□□□□ -1.31
SNHG4-208ENST00000514110 LEPROTO15243 131 aa6.84□□□□□ -1.31
SNHG4-208ENST00000514110 KRTAP4-1Q9BYQ7 146 aa6.84□□□□□ -1.31
SNHG4-208ENST00000514110 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
SNHG4-208ENST00000514110 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
SNHG4-208ENST00000514110 TRBV10-2A0A0K0K1G8 114 aa6.83□□□□□ -1.32
SNHG4-208ENST00000514110 LINC00310P59036 64 aa6.83□□□□□ -1.32
SNHG4-208ENST00000514110 Q8N377 158 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms