RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 C15orf56Q8N910 161 aa6.52□□□□□ -1.37
TPM3-221ENST00000513769 Q9HAA7 133 aa6.52□□□□□ -1.37
TPM3-221ENST00000513769 STAB2Q8WWQ8 2551 aa6.51□□□□□ -1.37
TPM3-221ENST00000513769 A0A1B0GV90 55 aa6.51□□□□□ -1.37
TPM3-221ENST00000513769 TLX1NBP0CAT3 122 aa6.51□□□□□ -1.37
TPM3-221ENST00000513769 FABP2P12104 132 aa6.51□□□□□ -1.37
TPM3-221ENST00000513769 SYCNQ0VAF6 134 aa6.51□□□□□ -1.37
TPM3-221ENST00000513769 LYRM7Q5U5X0 104 aa6.51□□□□□ -1.37
TPM3-221ENST00000513769 GTF2H5Q6ZYL4 71 aa6.51□□□□□ -1.37
TPM3-221ENST00000513769 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
TPM3-221ENST00000513769 TRBV20-1A0A075B6N2 111 aa6.5□□□□□ -1.37
TPM3-221ENST00000513769 A0A0U1RRA0 63 aa6.5□□□□□ -1.37
TPM3-221ENST00000513769 A0A1W2PPM0 123 aa6.5□□□□□ -1.37
TPM3-221ENST00000513769 H3BUT2 72 aa6.5□□□□□ -1.37
TPM3-221ENST00000513769 COX6CP09669 75 aa6.5□□□□□ -1.37
TPM3-221ENST00000513769 C6orf223Q8N319 242 aa6.5□□□□□ -1.37
TPM3-221ENST00000513769 DAND5Q8N907 189 aa6.5□□□□□ -1.37
TPM3-221ENST00000513769 USP17L23D6RBM5 183 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 PSCAO43653 123 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 UBE2V1Q13404 147 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 VAMP3Q15836 100 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 C10orf25Q5T742 122 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 SOSTDC1Q6X4U4 206 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 Q8N1X5 172 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 C6orf48Q9UBA6 75 aa6.49□□□□□ -1.37
TPM3-221ENST00000513769 GAGE10A6NGK3 116 aa6.48□□□□□ -1.37
TPM3-221ENST00000513769 PKIGQ9Y2B9 76 aa6.48□□□□□ -1.37
TPM3-221ENST00000513769 CBY1Q9Y3M2 126 aa6.48□□□□□ -1.37
TPM3-221ENST00000513769 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
TPM3-221ENST00000513769 CNBPP62633 177 aaKnown RBP6.47□□□□□ -1.37
TPM3-221ENST00000513769 HIGD2BQ4VC39 106 aa6.47□□□□□ -1.37
TPM3-221ENST00000513769 Q6ZR54 194 aa6.47□□□□□ -1.37
TPM3-221ENST00000513769 Q6ZRU5 148 aa6.47□□□□□ -1.37
TPM3-221ENST00000513769 TMEM126AQ9H061 195 aa6.47□□□□□ -1.37
TPM3-221ENST00000513769 K7ERJ3 54 aa6.46□□□□□ -1.38
TPM3-221ENST00000513769 TSPAN13O95857 204 aa6.46□□□□□ -1.38
TPM3-221ENST00000513769 SCGB1C2P0DMR2 95 aa6.46□□□□□ -1.38
TPM3-221ENST00000513769 NPC2P61916 151 aa6.46□□□□□ -1.38
TPM3-221ENST00000513769 C9orf116Q5BN46 136 aaPredicted RBP6.46□□□□□ -1.38
TPM3-221ENST00000513769 KRTAP1-5Q9BYS1 174 aa6.46□□□□□ -1.38
TPM3-221ENST00000513769 RPL28P46779 137 aaKnown RBP6.45□□□□□ -1.38
TPM3-221ENST00000513769 LINC00526Q96FQ7 95 aa6.45□□□□□ -1.38
TPM3-221ENST00000513769 CARD19Q96LW7 228 aa6.45□□□□□ -1.38
TPM3-221ENST00000513769 IGKV2-28A0A075B6P5 120 aa6.44□□□□□ -1.38
TPM3-221ENST00000513769 H0YGX0 51 aa6.44□□□□□ -1.38
TPM3-221ENST00000513769 IGKV2D-28P01615 120 aa6.44□□□□□ -1.38
TPM3-221ENST00000513769 SLPIP03973 132 aa6.44□□□□□ -1.38
TPM3-221ENST00000513769 PSMB2P49721 201 aa6.44□□□□□ -1.38
TPM3-221ENST00000513769 Q6ZRN7 208 aaPredicted RBP6.44□□□□□ -1.38
TPM3-221ENST00000513769 SPCS1Q9Y6A9 102 aa6.44□□□□□ -1.38
TPM3-221ENST00000513769 LOC107984640A0A0U1RRK4 108 aa6.43□□□□□ -1.38
TPM3-221ENST00000513769 LRCOL1A6NCL2 159 aa6.43□□□□□ -1.38
TPM3-221ENST00000513769 F8W1H4 67 aa6.43□□□□□ -1.38
TPM3-221ENST00000513769 K7EP34 96 aa6.43□□□□□ -1.38
TPM3-221ENST00000513769 Q1RN00 199 aa6.43□□□□□ -1.38
TPM3-221ENST00000513769 EPPK1P58107 5090 aaKnown RBP6.43□□□□□ -1.38
TPM3-221ENST00000513769 BIRC6Q9NR09 4857 aa6.42□□□□□ -1.38
TPM3-221ENST00000513769 RPL13AP40429 203 aaKnown RBP6.42□□□□□ -1.38
TPM3-221ENST00000513769 LINC00337Q8N6G1 96 aa6.42□□□□□ -1.38
TPM3-221ENST00000513769 RYR2Q92736 4967 aa6.42□□□□□ -1.38
TPM3-221ENST00000513769 M0R378 163 aa6.41□□□□□ -1.38
TPM3-221ENST00000513769 SNCGO76070 127 aa6.41□□□□□ -1.38
TPM3-221ENST00000513769 C1orf134Q5TEV5 83 aa6.41□□□□□ -1.38
TPM3-221ENST00000513769 Q6ZRP5 223 aa6.41□□□□□ -1.38
TPM3-221ENST00000513769 C9orf163Q8N9P6 203 aa6.41□□□□□ -1.38
TPM3-221ENST00000513769 DYNC2H1Q8NCM8 4307 aaKnown RBP6.41□□□□□ -1.38
TPM3-221ENST00000513769 LY6G6CO95867 125 aa6.4□□□□□ -1.38
TPM3-221ENST00000513769 ATXN8Q156A1 80 aa6.4□□□□□ -1.38
TPM3-221ENST00000513769 S100A7L2Q5SY68 101 aa6.4□□□□□ -1.38
TPM3-221ENST00000513769 OR13C6PQ8NH95 151 aa6.4□□□□□ -1.38
TPM3-221ENST00000513769 LINC00476Q8WZB0 136 aa6.4□□□□□ -1.38
TPM3-221ENST00000513769 LINC00474Q9P2X8 69 aa6.4□□□□□ -1.38
TPM3-221ENST00000513769 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
TPM3-221ENST00000513769 A0A1B0GX51 115 aa6.39□□□□□ -1.39
TPM3-221ENST00000513769 C16orf90A8MZG2 172 aa6.39□□□□□ -1.39
TPM3-221ENST00000513769 H7C2G1 150 aa6.39□□□□□ -1.39
TPM3-221ENST00000513769 TRIAP1O43715 76 aa6.39□□□□□ -1.39
TPM3-221ENST00000513769 IGLV6-57P01721 117 aa6.39□□□□□ -1.39
TPM3-221ENST00000513769 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
TPM3-221ENST00000513769 TRBV7-6A0A0J9YX20 115 aa6.38□□□□□ -1.39
TPM3-221ENST00000513769 M0QXV9 152 aa6.38□□□□□ -1.39
TPM3-221ENST00000513769 VPREB1P12018 145 aa6.38□□□□□ -1.39
TPM3-221ENST00000513769 GAGE2EQ4V326 116 aa6.38□□□□□ -1.39
TPM3-221ENST00000513769 SMIM11BQ8TCY0 68 aa6.38□□□□□ -1.39
TPM3-221ENST00000513769 NAA38Q9BRA0 125 aaKnown RBP6.38□□□□□ -1.39
TPM3-221ENST00000513769 XAGE1AQ9HD64 81 aa6.38□□□□□ -1.39
TPM3-221ENST00000513769 GAGE2DQ9UEU5 116 aa6.38□□□□□ -1.39
TPM3-221ENST00000513769 A0A087WTM6 91 aa6.37□□□□□ -1.39
TPM3-221ENST00000513769 H3BMG7 143 aa6.37□□□□□ -1.39
TPM3-221ENST00000513769 M0R2N4 97 aa6.37□□□□□ -1.39
TPM3-221ENST00000513769 TCL1BO95988 128 aa6.37□□□□□ -1.39
TPM3-221ENST00000513769 TRACP01848 142 aa6.37□□□□□ -1.39
TPM3-221ENST00000513769 PRR3P79522 188 aaKnown RBP6.37□□□□□ -1.39
TPM3-221ENST00000513769 Q8N814 137 aa6.37□□□□□ -1.39
TPM3-221ENST00000513769 DNAH7Q8WXX0 4024 aa6.36□□□□□ -1.39
TPM3-221ENST00000513769 LECT2O14960 151 aa6.36□□□□□ -1.39
TPM3-221ENST00000513769 C9orf129Q5T035 196 aaKnown RBP6.36□□□□□ -1.39
TPM3-221ENST00000513769 KRTAP5-3Q6L8H2 238 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms