RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 FSHBP01225 129 aa7.81□□□□□ -1.16
CPNE4-209ENST00000512055 TSHBP01222 138 aa7.81□□□□□ -1.16
CPNE4-209ENST00000512055 LY6G6DO95868 133 aa7.8□□□□□ -1.16
CPNE4-209ENST00000512055 UBE2D1P51668 147 aa7.79□□□□□ -1.16
CPNE4-209ENST00000512055 MAP1AP78559 2803 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-209ENST00000512055 TRBV6-8A0A0A6YYG3 113 aa7.79□□□□□ -1.16
CPNE4-209ENST00000512055 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
CPNE4-209ENST00000512055 ODF3L2Q3SX64 289 aa7.78□□□□□ -1.16
CPNE4-209ENST00000512055 FREM2Q5SZK8 3169 aa7.78□□□□□ -1.16
CPNE4-209ENST00000512055 BOD1L1Q8NFC6 3051 aa7.78□□□□□ -1.16
CPNE4-209ENST00000512055 SBSPONQ8IVN8 264 aa7.78□□□□□ -1.16
CPNE4-209ENST00000512055 A0A087WSZ3 146 aa7.77□□□□□ -1.16
CPNE4-209ENST00000512055 BRI3O95415 125 aa7.77□□□□□ -1.17
CPNE4-209ENST00000512055 FRYQ5TBA9 3013 aa7.77□□□□□ -1.17
CPNE4-209ENST00000512055 NBEAQ8NFP9 2946 aa7.77□□□□□ -1.17
CPNE4-209ENST00000512055 SMIM29Q86T20 159 aa7.76□□□□□ -1.17
CPNE4-209ENST00000512055 CD164L2Q6UWJ8 174 aa7.76□□□□□ -1.17
CPNE4-209ENST00000512055 C7orf33Q8WU49 177 aa7.75□□□□□ -1.17
CPNE4-209ENST00000512055 IGIPA6NJ69 53 aa7.75□□□□□ -1.17
CPNE4-209ENST00000512055 A8MUN3 132 aa7.75□□□□□ -1.17
CPNE4-209ENST00000512055 IGLV2-18A0A075B6J9 118 aa7.74□□□□□ -1.17
CPNE4-209ENST00000512055 TRBV6-4A0A1B0GX49 114 aa7.74□□□□□ -1.17
CPNE4-209ENST00000512055 PRR3P79522 188 aaKnown RBP7.74□□□□□ -1.17
CPNE4-209ENST00000512055 HECTD1Q9ULT8 2610 aa7.74□□□□□ -1.17
CPNE4-209ENST00000512055 IGKV2D-30A0A075B6S6 120 aa7.74□□□□□ -1.17
CPNE4-209ENST00000512055 IGKV2-30P06310 120 aa7.74□□□□□ -1.17
CPNE4-209ENST00000512055 H3BS24 57 aa7.74□□□□□ -1.17
CPNE4-209ENST00000512055 LINC01561Q8N1V8 128 aa7.74□□□□□ -1.17
CPNE4-209ENST00000512055 FLNBO75369 2602 aaKnown RBP7.74□□□□□ -1.17
CPNE4-209ENST00000512055 C7orf65Q6ZTY9 151 aa7.73□□□□□ -1.17
CPNE4-209ENST00000512055 MUC3AQ02505 3323 aa7.73□□□□□ -1.17
CPNE4-209ENST00000512055 CIRBP-AS1Q8TBR5 109 aa7.73□□□□□ -1.17
CPNE4-209ENST00000512055 C11orf45Q8TAV5 145 aa7.73□□□□□ -1.17
CPNE4-209ENST00000512055 M0R2N4 97 aa7.73□□□□□ -1.17
CPNE4-209ENST00000512055 LINC00959A0A1B0GUT2 108 aa7.73□□□□□ -1.17
CPNE4-209ENST00000512055 ZNF580Q9UK33 172 aa7.73□□□□□ -1.17
CPNE4-209ENST00000512055 IGLV4-69A0A075B6H9 119 aa7.72□□□□□ -1.17
CPNE4-209ENST00000512055 ACYP2P14621 99 aa7.72□□□□□ -1.17
CPNE4-209ENST00000512055 LINC00336Q6ZUF6 198 aa7.72□□□□□ -1.17
CPNE4-209ENST00000512055 COX17Q14061 63 aa7.72□□□□□ -1.17
CPNE4-209ENST00000512055 LCA10Q71F78 164 aa7.72□□□□□ -1.17
CPNE4-209ENST00000512055 TNRC18O15417 2968 aaPredicted RBP7.71□□□□□ -1.17
CPNE4-209ENST00000512055 FAM19A4Q96LR4 140 aa7.71□□□□□ -1.18
CPNE4-209ENST00000512055 Q6ZTC4 211 aa7.7□□□□□ -1.18
CPNE4-209ENST00000512055 CYSRT1A8MQ03 144 aa7.7□□□□□ -1.18
CPNE4-209ENST00000512055 Q6ZSN1 163 aa7.7□□□□□ -1.18
CPNE4-209ENST00000512055 KTN1-AS1Q86SY8 53 aa7.69□□□□□ -1.18
CPNE4-209ENST00000512055 MUC7Q8TAX7 377 aa7.69□□□□□ -1.18
CPNE4-209ENST00000512055 C9orf116Q5BN46 136 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-209ENST00000512055 ADAMTSL4-AS1Q5T5F5 129 aa7.69□□□□□ -1.18
CPNE4-209ENST00000512055 C6orf48Q9UBA6 75 aa7.69□□□□□ -1.18
CPNE4-209ENST00000512055 TSPEAR-AS2P59090 65 aa7.69□□□□□ -1.18
CPNE4-209ENST00000512055 Q8IZM0 81 aa7.68□□□□□ -1.18
CPNE4-209ENST00000512055 DEFB131BA0A096LNP1 70 aa7.68□□□□□ -1.18
CPNE4-209ENST00000512055 UNQ6190/PRO20217Q6UXQ8 127 aa7.68□□□□□ -1.18
CPNE4-209ENST00000512055 LINC00474Q9P2X8 69 aa7.68□□□□□ -1.18
CPNE4-209ENST00000512055 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
CPNE4-209ENST00000512055 IGLV1-51P01701 117 aa7.67□□□□□ -1.18
CPNE4-209ENST00000512055 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
CPNE4-209ENST00000512055 Q9BRP9 147 aa7.66□□□□□ -1.18
CPNE4-209ENST00000512055 LINC01600Q96MT4 127 aa7.66□□□□□ -1.18
CPNE4-209ENST00000512055 LINC01554Q52M75 96 aa7.66□□□□□ -1.18
CPNE4-209ENST00000512055 LINC00242Q5T6M2 205 aa7.66□□□□□ -1.18
CPNE4-209ENST00000512055 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
CPNE4-209ENST00000512055 A8MTW9 85 aa7.65□□□□□ -1.18
CPNE4-209ENST00000512055 ADGRG4Q8IZF6 3080 aa7.65□□□□□ -1.19
CPNE4-209ENST00000512055 SMIM1B2RUZ4 78 aa7.65□□□□□ -1.19
CPNE4-209ENST00000512055 LINC00315P59091 139 aa7.65□□□□□ -1.19
CPNE4-209ENST00000512055 CDC42SE2Q9NRR3 84 aa7.64□□□□□ -1.19
CPNE4-209ENST00000512055 FLNAP21333 2647 aaKnown RBP7.64□□□□□ -1.19
CPNE4-209ENST00000512055 FHL2Q14192 279 aa7.64□□□□□ -1.19
CPNE4-209ENST00000512055 DMXL2Q8TDJ6 3036 aa7.63□□□□□ -1.19
CPNE4-209ENST00000512055 CYP4F30PQ9H0H9 118 aa7.63□□□□□ -1.19
CPNE4-209ENST00000512055 CFAP46Q8IYW2 2715 aa7.63□□□□□ -1.19
CPNE4-209ENST00000512055 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
CPNE4-209ENST00000512055 COX6A2Q02221 97 aa7.63□□□□□ -1.19
CPNE4-209ENST00000512055 Q8N2B8 174 aa7.63□□□□□ -1.19
CPNE4-209ENST00000512055 TM2D3Q9BRN9 247 aa7.63□□□□□ -1.19
CPNE4-209ENST00000512055 BCE1O60756 84 aa7.62□□□□□ -1.19
CPNE4-209ENST00000512055 KPRPQ5T749 579 aaPredicted RBP7.62□□□□□ -1.19
CPNE4-209ENST00000512055 C2orf48Q96LS8 159 aa7.62□□□□□ -1.19
CPNE4-209ENST00000512055 C16orf95Q9H693 158 aa7.61□□□□□ -1.19
CPNE4-209ENST00000512055 KLK9Q2XQG4 91 aa7.61□□□□□ -1.19
CPNE4-209ENST00000512055 NUPR2A6NF83 97 aa7.61□□□□□ -1.19
CPNE4-209ENST00000512055 UQCR11O14957 56 aa7.61□□□□□ -1.19
CPNE4-209ENST00000512055 ITPR3Q14573 2671 aa7.61□□□□□ -1.19
CPNE4-209ENST00000512055 SMCPP49901 116 aaPredicted RBP7.6□□□□□ -1.19
CPNE4-209ENST00000512055 IGLV4-60A0A075B6I1 120 aa7.6□□□□□ -1.19
CPNE4-209ENST00000512055 AMELXQ99217 191 aa7.6□□□□□ -1.19
CPNE4-209ENST00000512055 C11orf72Q8NBR9 251 aa7.6□□□□□ -1.19
CPNE4-209ENST00000512055 LINC01546A6NGU7 62 aa7.59□□□□□ -1.19
CPNE4-209ENST00000512055 C6orf223Q8N319 242 aa7.59□□□□□ -1.19
CPNE4-209ENST00000512055 ATMQ13315 3056 aa7.59□□□□□ -1.19
CPNE4-209ENST00000512055 EGFEM1PQ0D2K5 195 aa7.59□□□□□ -1.19
CPNE4-209ENST00000512055 SPATA3Q8NHX4 192 aa7.59□□□□□ -1.19
CPNE4-209ENST00000512055 LELP1Q5T871 98 aa7.58□□□□□ -1.2
CPNE4-209ENST00000512055 TP53AIP1Q9HCN2 124 aa7.58□□□□□ -1.2
CPNE4-209ENST00000512055 LOC400499M0QZD8 3231 aa7.58□□□□□ -1.2
CPNE4-209ENST00000512055 LOC101927531A0A1B0GV80 90 aa7.57□□□□□ -1.2
CPNE4-209ENST00000512055 LUZP6Q538Z0 58 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms