RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 DNAH1Q9P2D7 4330 aa9.92□□□□□ -0.82
SCLT1-209ENST00000511426 LINC00337Q8N6G1 96 aa9.92□□□□□ -0.82
SCLT1-209ENST00000511426 TMEM126AQ9H061 195 aa9.92□□□□□ -0.82
SCLT1-209ENST00000511426 H7C2G1 150 aa9.91□□□□□ -0.82
SCLT1-209ENST00000511426 SLPIP03973 132 aa9.91□□□□□ -0.82
SCLT1-209ENST00000511426 PLECQ15149 4684 aaKnown RBP9.91□□□□□ -0.82
SCLT1-209ENST00000511426 LRCOL1A6NCL2 159 aa9.9□□□□□ -0.82
SCLT1-209ENST00000511426 SCGB1C2P0DMR2 95 aa9.9□□□□□ -0.82
SCLT1-209ENST00000511426 RPL28P46779 137 aaKnown RBP9.9□□□□□ -0.82
SCLT1-209ENST00000511426 Q6ZRP5 223 aa9.9□□□□□ -0.82
SCLT1-209ENST00000511426 PLA2G2DQ9UNK4 145 aa9.9□□□□□ -0.82
SCLT1-209ENST00000511426 CBY1Q9Y3M2 126 aa9.9□□□□□ -0.82
SCLT1-209ENST00000511426 STARD9Q9P2P6 4700 aa9.9□□□□□ -0.82
SCLT1-209ENST00000511426 LOC107984640A0A0U1RRK4 108 aa9.9□□□□□ -0.83
SCLT1-209ENST00000511426 LECT2O14960 151 aa9.9□□□□□ -0.83
SCLT1-209ENST00000511426 TRIAP1O43715 76 aa9.9□□□□□ -0.83
SCLT1-209ENST00000511426 LY6G6CO95867 125 aa9.89□□□□□ -0.83
SCLT1-209ENST00000511426 WFDC2Q14508 124 aa9.89□□□□□ -0.83
SCLT1-209ENST00000511426 XAGE1AQ9HD64 81 aa9.87□□□□□ -0.83
SCLT1-209ENST00000511426 M0R2N4 97 aa9.87□□□□□ -0.83
SCLT1-209ENST00000511426 RPL18AQ02543 176 aaKnown RBP9.87□□□□□ -0.83
SCLT1-209ENST00000511426 C1orf134Q5TEV5 83 aa9.87□□□□□ -0.83
SCLT1-209ENST00000511426 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
SCLT1-209ENST00000511426 VPREB1P12018 145 aa9.86□□□□□ -0.83
SCLT1-209ENST00000511426 GAGE2EQ4V326 116 aa9.86□□□□□ -0.83
SCLT1-209ENST00000511426 GAGE2DQ9UEU5 116 aa9.86□□□□□ -0.83
SCLT1-209ENST00000511426 ATXN8Q156A1 80 aa9.85□□□□□ -0.83
SCLT1-209ENST00000511426 S100A7L2Q5SY68 101 aa9.85□□□□□ -0.83
SCLT1-209ENST00000511426 H0YGX0 51 aa9.84□□□□□ -0.83
SCLT1-209ENST00000511426 M0R378 163 aa9.84□□□□□ -0.83
SCLT1-209ENST00000511426 IGLV6-57P01721 117 aa9.84□□□□□ -0.83
SCLT1-209ENST00000511426 Q8N814 137 aa9.84□□□□□ -0.83
SCLT1-209ENST00000511426 SMIM11BQ8TCY0 68 aa9.84□□□□□ -0.83
SCLT1-209ENST00000511426 VPS13DQ5THJ4 4388 aa9.84□□□□□ -0.83
SCLT1-209ENST00000511426 IGLV5-37A0A075B6J1 123 aa9.83□□□□□ -0.84
SCLT1-209ENST00000511426 C16orf90A8MZG2 172 aa9.83□□□□□ -0.84
SCLT1-209ENST00000511426 TCL1BO95988 128 aa9.83□□□□□ -0.84
SCLT1-209ENST00000511426 C9orf129Q5T035 196 aaKnown RBP9.83□□□□□ -0.84
SCLT1-209ENST00000511426 C9orf163Q8N9P6 203 aa9.83□□□□□ -0.84
SCLT1-209ENST00000511426 A0A087WTM6 91 aa9.83□□□□□ -0.84
SCLT1-209ENST00000511426 F8W1H4 67 aa9.83□□□□□ -0.84
SCLT1-209ENST00000511426 NCR3O14931 201 aa9.83□□□□□ -0.84
SCLT1-209ENST00000511426 Q8NDZ9 215 aa9.83□□□□□ -0.84
SCLT1-209ENST00000511426 H3BMG7 143 aa9.82□□□□□ -0.84
SCLT1-209ENST00000511426 LST1O00453 97 aa9.81□□□□□ -0.84
SCLT1-209ENST00000511426 PRR3P79522 188 aaKnown RBP9.81□□□□□ -0.84
SCLT1-209ENST00000511426 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
SCLT1-209ENST00000511426 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
SCLT1-209ENST00000511426 LYSTQ99698 3801 aa9.8□□□□□ -0.84
SCLT1-209ENST00000511426 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.79□□□□□ -0.84
SCLT1-209ENST00000511426 A0A1B0GX51 115 aa9.79□□□□□ -0.84
SCLT1-209ENST00000511426 TRACP01848 142 aa9.79□□□□□ -0.84
SCLT1-209ENST00000511426 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
SCLT1-209ENST00000511426 M0QXV9 152 aa9.77□□□□□ -0.84
SCLT1-209ENST00000511426 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.85
SCLT1-209ENST00000511426 TRBV7-6A0A0J9YX20 115 aa9.77□□□□□ -0.85
SCLT1-209ENST00000511426 TRBV10-3A0A0K0K1G6 114 aa9.77□□□□□ -0.85
SCLT1-209ENST00000511426 LINC01620Q4KN68 170 aa9.77□□□□□ -0.85
SCLT1-209ENST00000511426 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
SCLT1-209ENST00000511426 SNCGO76070 127 aa9.76□□□□□ -0.85
SCLT1-209ENST00000511426 LINC01600Q96MT4 127 aa9.76□□□□□ -0.85
SCLT1-209ENST00000511426 CLEC2BQ92478 149 aa9.75□□□□□ -0.85
SCLT1-209ENST00000511426 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
SCLT1-209ENST00000511426 A0A096LNI7 61 aa9.74□□□□□ -0.85
SCLT1-209ENST00000511426 C6orf99Q4VX62 202 aa9.74□□□□□ -0.85
SCLT1-209ENST00000511426 SERTAD4-AS1Q5TG53 156 aa9.74□□□□□ -0.85
SCLT1-209ENST00000511426 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
SCLT1-209ENST00000511426 H3BT86 120 aa9.74□□□□□ -0.85
SCLT1-209ENST00000511426 SDIM1Q6ZPB5 146 aa9.74□□□□□ -0.85
SCLT1-209ENST00000511426 ZNF73O43830 326 aaPredicted RBP9.73□□□□□ -0.85
SCLT1-209ENST00000511426 KCNQ1DNQ9H478 68 aa9.73□□□□□ -0.85
SCLT1-209ENST00000511426 C9JAW5 83 aa9.72□□□□□ -0.85
SCLT1-209ENST00000511426 SLC25A20O43772 301 aa9.72□□□□□ -0.85
SCLT1-209ENST00000511426 MRPL55Q7Z7F7 128 aaKnown RBP9.72□□□□□ -0.85
SCLT1-209ENST00000511426 C7orf33Q8WU49 177 aa9.72□□□□□ -0.85
SCLT1-209ENST00000511426 PRYO14603 147 aa9.71□□□□□ -0.85
SCLT1-209ENST00000511426 DNAL4O96015 105 aa9.71□□□□□ -0.85
SCLT1-209ENST00000511426 C22orf24Q9Y442 160 aa9.71□□□□□ -0.85
SCLT1-209ENST00000511426 ALMS1Q8TCU4 4167 aa9.71□□□□□ -0.86
SCLT1-209ENST00000511426 RTL8CO15255 209 aa9.71□□□□□ -0.86
SCLT1-209ENST00000511426 IGLV1-50A0A075B6I6 118 aa9.69□□□□□ -0.86
SCLT1-209ENST00000511426 IGKV2-24A0A0C4DH68 120 aa9.69□□□□□ -0.86
SCLT1-209ENST00000511426 LCE6AA0A183 80 aa9.69□□□□□ -0.86
SCLT1-209ENST00000511426 ANKRD29Q8N6D5 301 aa9.69□□□□□ -0.86
SCLT1-209ENST00000511426 FAM218AQ96MZ4 157 aa9.69□□□□□ -0.86
SCLT1-209ENST00000511426 TGP01266 2768 aa9.69□□□□□ -0.86
SCLT1-209ENST00000511426 FAM168BA1KXE4 195 aa9.68□□□□□ -0.86
SCLT1-209ENST00000511426 ELOF1P60002 83 aaKnown RBP9.68□□□□□ -0.86
SCLT1-209ENST00000511426 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
SCLT1-209ENST00000511426 KRTAP7-1Q8IUC3 87 aa9.68□□□□□ -0.86
SCLT1-209ENST00000511426 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
SCLT1-209ENST00000511426 LINC00575Q6W349 94 aa9.67□□□□□ -0.86
SCLT1-209ENST00000511426 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
SCLT1-209ENST00000511426 IGLV5-52A0A0A0MRZ9 124 aa9.67□□□□□ -0.86
SCLT1-209ENST00000511426 H3BQ85 93 aa9.67□□□□□ -0.86
SCLT1-209ENST00000511426 GHRHP01286 108 aa9.67□□□□□ -0.86
SCLT1-209ENST00000511426 COX7BP24311 80 aa9.67□□□□□ -0.86
SCLT1-209ENST00000511426 SMCPP49901 116 aaPredicted RBP9.67□□□□□ -0.86
SCLT1-209ENST00000511426 DNAH10Q8IVF4 4471 aa9.66□□□□□ -0.86
SCLT1-209ENST00000511426 A0A087WYN8 130 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms