RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 LINC00304Q8N9R0 145 aa7.98□□□□□ -1.13
CCHCR1-227ENST00000508852 ZNF625Q96I27 306 aaPredicted RBP7.98□□□□□ -1.13
CCHCR1-227ENST00000508852 APOC3P02656 99 aa7.97□□□□□ -1.13
CCHCR1-227ENST00000508852 LINC00158P58513 81 aa7.97□□□□□ -1.13
CCHCR1-227ENST00000508852 PMCHL1Q16048 86 aa7.96□□□□□ -1.14
CCHCR1-227ENST00000508852 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
CCHCR1-227ENST00000508852 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.14
CCHCR1-227ENST00000508852 M0R378 163 aa7.95□□□□□ -1.14
CCHCR1-227ENST00000508852 SCO1O75880 301 aa7.95□□□□□ -1.14
CCHCR1-227ENST00000508852 HERV-K104P63124 156 aa7.95□□□□□ -1.14
CCHCR1-227ENST00000508852 PRLHP81277 87 aa7.95□□□□□ -1.14
CCHCR1-227ENST00000508852 KRTAP13-2Q52LG2 175 aa7.95□□□□□ -1.14
CCHCR1-227ENST00000508852 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
CCHCR1-227ENST00000508852 TMEM223A0PJW6 202 aa7.94□□□□□ -1.14
CCHCR1-227ENST00000508852 TMEM238C9JI98 176 aa7.94□□□□□ -1.14
CCHCR1-227ENST00000508852 S100A12P80511 92 aa7.94□□□□□ -1.14
CCHCR1-227ENST00000508852 SPAG11AQ6PDA7 123 aa7.94□□□□□ -1.14
CCHCR1-227ENST00000508852 ANAPC11Q9NYG5 84 aa7.94□□□□□ -1.14
CCHCR1-227ENST00000508852 PLEKHB2Q96CS7 222 aa7.93□□□□□ -1.14
CCHCR1-227ENST00000508852 MAP1LC3CQ9BXW4 147 aa7.93□□□□□ -1.14
CCHCR1-227ENST00000508852 PRYO14603 147 aa7.91□□□□□ -1.14
CCHCR1-227ENST00000508852 MEIG1Q5JSS6 88 aa7.91□□□□□ -1.14
CCHCR1-227ENST00000508852 HIGD2AQ9BW72 106 aa7.91□□□□□ -1.14
CCHCR1-227ENST00000508852 MYMXA0A1B0GTQ4 84 aa7.9□□□□□ -1.14
CCHCR1-227ENST00000508852 HSBP1O75506 76 aa7.9□□□□□ -1.14
CCHCR1-227ENST00000508852 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
CCHCR1-227ENST00000508852 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
CCHCR1-227ENST00000508852 BOD1L2Q8IYS8 172 aa7.89□□□□□ -1.15
CCHCR1-227ENST00000508852 LINC00337Q8N6G1 96 aa7.89□□□□□ -1.15
CCHCR1-227ENST00000508852 SMIM13P0DJ93 91 aa7.88□□□□□ -1.15
CCHCR1-227ENST00000508852 SPRR4Q96PI1 79 aa7.88□□□□□ -1.15
CCHCR1-227ENST00000508852 KCNQ1DNQ9H478 68 aa7.88□□□□□ -1.15
CCHCR1-227ENST00000508852 A0A0U1RRA0 63 aa7.87□□□□□ -1.15
CCHCR1-227ENST00000508852 MIR7-3HGQ8N6C7 128 aa7.87□□□□□ -1.15
CCHCR1-227ENST00000508852 Q8NDZ9 215 aa7.87□□□□□ -1.15
CCHCR1-227ENST00000508852 YPEL4Q96NS1 127 aa7.87□□□□□ -1.15
CCHCR1-227ENST00000508852 CDIP1Q9H305 208 aa7.87□□□□□ -1.15
CCHCR1-227ENST00000508852 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
CCHCR1-227ENST00000508852 MUC2Q02817 5179 aa7.87□□□□□ -1.15
CCHCR1-227ENST00000508852 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
CCHCR1-227ENST00000508852 ETDCA0A1B0GVM5 59 aa7.86□□□□□ -1.15
CCHCR1-227ENST00000508852 PLNP26678 52 aa7.86□□□□□ -1.15
CCHCR1-227ENST00000508852 LEPROTL1O95214 131 aa7.85□□□□□ -1.15
CCHCR1-227ENST00000508852 SPRR1AP35321 89 aa7.85□□□□□ -1.15
CCHCR1-227ENST00000508852 FP248Q71RG6 208 aaPredicted RBP7.85□□□□□ -1.15
CCHCR1-227ENST00000508852 LOC107984156A0A0G2JMH3 177 aa7.84□□□□□ -1.15
CCHCR1-227ENST00000508852 NMUP48645 174 aa7.84□□□□□ -1.15
CCHCR1-227ENST00000508852 HERVK_113P61574 105 aa7.84□□□□□ -1.15
CCHCR1-227ENST00000508852 ARL17AQ8IVW1 177 aa7.84□□□□□ -1.15
CCHCR1-227ENST00000508852 C3orf22Q8N5N4 141 aa7.84□□□□□ -1.15
CCHCR1-227ENST00000508852 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
CCHCR1-227ENST00000508852 HSPB8Q9UJY1 196 aa7.84□□□□□ -1.15
CCHCR1-227ENST00000508852 TRBV10-2A0A0K0K1G8 114 aa7.83□□□□□ -1.16
CCHCR1-227ENST00000508852 LEPROTO15243 131 aa7.83□□□□□ -1.16
CCHCR1-227ENST00000508852 NCR3O14931 201 aa7.82□□□□□ -1.16
CCHCR1-227ENST00000508852 SPINK1P00995 79 aa7.82□□□□□ -1.16
CCHCR1-227ENST00000508852 FAM19A2Q8N3H0 131 aa7.82□□□□□ -1.16
CCHCR1-227ENST00000508852 SMCR5Q8TEV8 140 aa7.82□□□□□ -1.16
CCHCR1-227ENST00000508852 MIEN1Q9BRT3 115 aa7.82□□□□□ -1.16
CCHCR1-227ENST00000508852 KRTAP4-16G5E9R7 235 aaPredicted RBP7.81□□□□□ -1.16
CCHCR1-227ENST00000508852 H0Y8G0 127 aa7.81□□□□□ -1.16
CCHCR1-227ENST00000508852 PPDPFQ9H3Y8 114 aa7.81□□□□□ -1.16
CCHCR1-227ENST00000508852 CBY1Q9Y3M2 126 aa7.81□□□□□ -1.16
CCHCR1-227ENST00000508852 TRBV10-3A0A0K0K1G6 114 aa7.8□□□□□ -1.16
CCHCR1-227ENST00000508852 DPM2O94777 84 aa7.8□□□□□ -1.16
CCHCR1-227ENST00000508852 LINC00483Q53H64 154 aa7.8□□□□□ -1.16
CCHCR1-227ENST00000508852 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
CCHCR1-227ENST00000508852 J3QQQ9 107 aa7.79□□□□□ -1.16
CCHCR1-227ENST00000508852 NDUFC2O95298 119 aa7.79□□□□□ -1.16
CCHCR1-227ENST00000508852 TRGC2P03986 189 aa7.79□□□□□ -1.16
CCHCR1-227ENST00000508852 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
CCHCR1-227ENST00000508852 DDTP30046 118 aa7.79□□□□□ -1.16
CCHCR1-227ENST00000508852 JOSD1Q15040 202 aaPredicted RBP7.79□□□□□ -1.16
CCHCR1-227ENST00000508852 SERF1AO75920 110 aa7.78□□□□□ -1.16
CCHCR1-227ENST00000508852 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
CCHCR1-227ENST00000508852 SSBP3-AS1Q7Z2R9 100 aa7.78□□□□□ -1.16
CCHCR1-227ENST00000508852 Q8NBF4 154 aa7.78□□□□□ -1.16
CCHCR1-227ENST00000508852 B5MCH6 92 aa7.77□□□□□ -1.17
CCHCR1-227ENST00000508852 IGKCP01834 107 aa7.77□□□□□ -1.17
CCHCR1-227ENST00000508852 S100A7L2Q5SY68 101 aa7.77□□□□□ -1.17
CCHCR1-227ENST00000508852 MUC17Q685J3 4493 aa7.75□□□□□ -1.17
CCHCR1-227ENST00000508852 C5orf52A6NGY3 159 aa7.75□□□□□ -1.17
CCHCR1-227ENST00000508852 HINT1P49773 126 aaPredicted RBP7.75□□□□□ -1.17
CCHCR1-227ENST00000508852 GAGE2AQ6NT46 116 aa7.75□□□□□ -1.17
CCHCR1-227ENST00000508852 Q6ZRX8 168 aa7.75□□□□□ -1.17
CCHCR1-227ENST00000508852 IGLV6-57P01721 117 aa7.74□□□□□ -1.17
CCHCR1-227ENST00000508852 FABP4P15090 132 aa7.74□□□□□ -1.17
CCHCR1-227ENST00000508852 TSPEAR-AS2P59090 65 aa7.74□□□□□ -1.17
CCHCR1-227ENST00000508852 DAND5Q8N907 189 aa7.73□□□□□ -1.17
CCHCR1-227ENST00000508852 TRAV23DV6A0A075B6W5 121 aa7.72□□□□□ -1.17
CCHCR1-227ENST00000508852 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.18
CCHCR1-227ENST00000508852 E9PLD3 99 aa7.71□□□□□ -1.18
CCHCR1-227ENST00000508852 SLC25A20O43772 301 aa7.71□□□□□ -1.18
CCHCR1-227ENST00000508852 LINC00310P59036 64 aa7.71□□□□□ -1.18
CCHCR1-227ENST00000508852 ZNF73O43830 326 aaPredicted RBP7.7□□□□□ -1.18
CCHCR1-227ENST00000508852 MOBPQ13875 183 aa7.7□□□□□ -1.18
CCHCR1-227ENST00000508852 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
CCHCR1-227ENST00000508852 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
CCHCR1-227ENST00000508852 SLC25A34Q6PIV7 304 aa7.69□□□□□ -1.18
CCHCR1-227ENST00000508852 PMCHL2Q9BQD1 86 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms