RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 Q8NDZ9 215 aa14.73□□□□□ -0.05
RNF4-207ENST00000506706 UPK3BQ9BT76 320 aa14.73□□□□□ -0.05
RNF4-207ENST00000506706 NCR3O14931 201 aa14.73□□□□□ -0.05
RNF4-207ENST00000506706 F8WDY8 70 aa14.72□□□□□ -0.05
RNF4-207ENST00000506706 Q6ZRU5 148 aa14.72□□□□□ -0.05
RNF4-207ENST00000506706 TEX49A0A1B0GTD5 131 aa14.71□□□□□ -0.05
RNF4-207ENST00000506706 A0A087WYN8 130 aa14.69□□□□□ -0.06
RNF4-207ENST00000506706 S100A7L2Q5SY68 101 aa14.69□□□□□ -0.06
RNF4-207ENST00000506706 BAALC-AS2P0C853 105 aa14.68□□□□□ -0.06
RNF4-207ENST00000506706 DNAL4O96015 105 aa14.67□□□□□ -0.06
RNF4-207ENST00000506706 RMI2Q96E14 147 aa14.67□□□□□ -0.06
RNF4-207ENST00000506706 XAGE1AQ9HD64 81 aa14.67□□□□□ -0.06
RNF4-207ENST00000506706 DNAH9Q9NYC9 4486 aa14.65□□□□□ -0.06
RNF4-207ENST00000506706 NDUFC2-KCTD14E9PQ53 114 aa14.65□□□□□ -0.06
RNF4-207ENST00000506706 SYCNQ0VAF6 134 aa14.65□□□□□ -0.06
RNF4-207ENST00000506706 LECT2O14960 151 aa14.64□□□□□ -0.07
RNF4-207ENST00000506706 RPL18AQ02543 176 aaKnown RBP14.64□□□□□ -0.07
RNF4-207ENST00000506706 IGLV6-57P01721 117 aa14.62□□□□□ -0.07
RNF4-207ENST00000506706 CDIP1Q9H305 208 aa14.61□□□□□ -0.07
RNF4-207ENST00000506706 NHLRC4P0CG21 123 aaPredicted RBP14.6□□□□□ -0.07
RNF4-207ENST00000506706 C6orf99Q4VX62 202 aa14.6□□□□□ -0.07
RNF4-207ENST00000506706 SIGMAR1Q99720 223 aa14.6□□□□□ -0.07
RNF4-207ENST00000506706 APLNQ9ULZ1 77 aa14.6□□□□□ -0.07
RNF4-207ENST00000506706 A0A1B0GX51 115 aa14.59□□□□□ -0.07
RNF4-207ENST00000506706 USP17L23D6RBM5 183 aa14.59□□□□□ -0.07
RNF4-207ENST00000506706 COL7A1Q02388 2944 aa14.59□□□□□ -0.07
RNF4-207ENST00000506706 CASC10Q5T4H9 136 aa14.59□□□□□ -0.07
RNF4-207ENST00000506706 GAGE2EQ4V326 116 aa14.58□□□□□ -0.08
RNF4-207ENST00000506706 GAGE2DQ9UEU5 116 aa14.58□□□□□ -0.08
RNF4-207ENST00000506706 C22orf24Q9Y442 160 aa14.58□□□□□ -0.08
RNF4-207ENST00000506706 Q6ZRP5 223 aa14.57□□□□□ -0.08
RNF4-207ENST00000506706 VPREB1P12018 145 aa14.57□□□□□ -0.08
RNF4-207ENST00000506706 UBE2DNLQ8IWF7 75 aa14.57□□□□□ -0.08
RNF4-207ENST00000506706 DNAH1Q9P2D7 4330 aa14.55□□□□□ -0.08
RNF4-207ENST00000506706 TRBV10-3A0A0K0K1G6 114 aa14.55□□□□□ -0.08
RNF4-207ENST00000506706 Q8N814 137 aa14.55□□□□□ -0.08
RNF4-207ENST00000506706 LINC00167Q96N53 147 aa14.54□□□□□ -0.08
RNF4-207ENST00000506706 SNCGO76070 127 aa14.53□□□□□ -0.08
RNF4-207ENST00000506706 ORMDL1Q9P0S3 153 aa14.53□□□□□ -0.08
RNF4-207ENST00000506706 STAB2Q8WWQ8 2551 aa14.53□□□□□ -0.08
RNF4-207ENST00000506706 M0R378 163 aa14.53□□□□□ -0.08
RNF4-207ENST00000506706 SLPIP03973 132 aa14.53□□□□□ -0.08
RNF4-207ENST00000506706 PCP4P48539 62 aa14.53□□□□□ -0.08
RNF4-207ENST00000506706 TRAV23DV6A0A075B6W5 121 aa14.52□□□□□ -0.09
RNF4-207ENST00000506706 TLX1NBP0CAT3 122 aa14.52□□□□□ -0.09
RNF4-207ENST00000506706 NUPR2A6NF83 97 aa14.5□□□□□ -0.09
RNF4-207ENST00000506706 C9orf129Q5T035 196 aaKnown RBP14.5□□□□□ -0.09
RNF4-207ENST00000506706 LINC00575Q6W349 94 aa14.5□□□□□ -0.09
RNF4-207ENST00000506706 KRTAP1-5Q9BYS1 174 aa14.5□□□□□ -0.09
RNF4-207ENST00000506706 DYNC2H1Q8NCM8 4307 aaKnown RBP14.49□□□□□ -0.09
RNF4-207ENST00000506706 INAFM2P0DMQ5 153 aa14.49□□□□□ -0.09
RNF4-207ENST00000506706 DIRC1Q969H9 104 aa14.48□□□□□ -0.09
RNF4-207ENST00000506706 FAM240AA0A1B0GVK7 77 aa14.48□□□□□ -0.09
RNF4-207ENST00000506706 XGP55808 180 aa14.47□□□□□ -0.09
RNF4-207ENST00000506706 ZNF73O43830 326 aaPredicted RBP14.46□□□□□ -0.09
RNF4-207ENST00000506706 hADV29S1A0JD25 119 aa14.45□□□□□ -0.1
RNF4-207ENST00000506706 TMEM256-PLSCR3K7ERE1 68 aa14.43□□□□□ -0.1
RNF4-207ENST00000506706 MT-ATP8P03928 68 aa14.43□□□□□ -0.1
RNF4-207ENST00000506706 OBSCN-AS1Q96MR7 158 aa14.43□□□□□ -0.1
RNF4-207ENST00000506706 ACYP1P07311 99 aa14.42□□□□□ -0.1
RNF4-207ENST00000506706 NKAPP1Q8N9T2 125 aa14.42□□□□□ -0.1
RNF4-207ENST00000506706 TRBV7-6A0A0J9YX20 115 aa14.42□□□□□ -0.1
RNF4-207ENST00000506706 PSCAO43653 123 aa14.42□□□□□ -0.1
RNF4-207ENST00000506706 PLA2G2DQ9UNK4 145 aa14.42□□□□□ -0.1
RNF4-207ENST00000506706 COX7BP24311 80 aa14.41□□□□□ -0.1
RNF4-207ENST00000506706 SERTAD4-AS1Q5TG53 156 aa14.4□□□□□ -0.1
RNF4-207ENST00000506706 LYSTQ99698 3801 aa14.4□□□□□ -0.1
RNF4-207ENST00000506706 SCGB1A1P11684 91 aa14.39□□□□□ -0.11
RNF4-207ENST00000506706 LOC107984640A0A0U1RRK4 108 aa14.38□□□□□ -0.11
RNF4-207ENST00000506706 ELOF1P60002 83 aaKnown RBP14.38□□□□□ -0.11
RNF4-207ENST00000506706 GAGE2BQ13066 116 aa14.37□□□□□ -0.11
RNF4-207ENST00000506706 C14orf132Q9NPU4 83 aa14.37□□□□□ -0.11
RNF4-207ENST00000506706 TTC32Q5I0X7 151 aa14.36□□□□□ -0.11
RNF4-207ENST00000506706 CSMD3Q7Z407 3707 aa14.36□□□□□ -0.11
RNF4-207ENST00000506706 C7orf33Q8WU49 177 aa14.35□□□□□ -0.11
RNF4-207ENST00000506706 IGLV5-37A0A075B6J1 123 aa14.35□□□□□ -0.11
RNF4-207ENST00000506706 JMJD7-PLA2G4BH0Y9G9 81 aa14.35□□□□□ -0.11
RNF4-207ENST00000506706 C21orf62-AS1Q17RA5 79 aa14.34□□□□□ -0.11
RNF4-207ENST00000506706 GAGE2AQ6NT46 116 aa14.34□□□□□ -0.11
RNF4-207ENST00000506706 NBDYA0A0U1RRE5 68 aa14.33□□□□□ -0.12
RNF4-207ENST00000506706 Q6ZQY7 126 aa14.33□□□□□ -0.12
RNF4-207ENST00000506706 KCNQ1DNQ9H478 68 aa14.33□□□□□ -0.12
RNF4-207ENST00000506706 FAM168BA1KXE4 195 aa14.32□□□□□ -0.12
RNF4-207ENST00000506706 CNBPP62633 177 aaKnown RBP14.32□□□□□ -0.12
RNF4-207ENST00000506706 H3BQ85 93 aa14.32□□□□□ -0.12
RNF4-207ENST00000506706 C14orf177Q52M58 125 aa14.32□□□□□ -0.12
RNF4-207ENST00000506706 A0A1B0GV72 72 aa14.3□□□□□ -0.12
RNF4-207ENST00000506706 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.3□□□□□ -0.12
RNF4-207ENST00000506706 LINC00528Q8N1L1 170 aa14.3□□□□□ -0.12
RNF4-207ENST00000506706 PRKDCP78527 4128 aaKnown RBP14.3□□□□□ -0.12
RNF4-207ENST00000506706 DNAH7Q8WXX0 4024 aa14.29□□□□□ -0.12
RNF4-207ENST00000506706 GHRHP01286 108 aa14.27□□□□□ -0.13
RNF4-207ENST00000506706 PLECQ15149 4684 aaKnown RBP14.27□□□□□ -0.13
RNF4-207ENST00000506706 KRTAP7-1Q8IUC3 87 aa14.27□□□□□ -0.13
RNF4-207ENST00000506706 FAM19A5Q7Z5A7 132 aaPredicted RBP14.26□□□□□ -0.13
RNF4-207ENST00000506706 IGLV1-50A0A075B6I6 118 aa14.26□□□□□ -0.13
RNF4-207ENST00000506706 DNAH10Q8IVF4 4471 aa14.24□□□□□ -0.13
RNF4-207ENST00000506706 RPL37AP8A6NKH3 93 aa14.24□□□□□ -0.13
RNF4-207ENST00000506706 PRYO14603 147 aa14.24□□□□□ -0.13
RNF4-207ENST00000506706 SDIM1Q6ZPB5 146 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms