RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 IFITM1P13164 125 aa6.1□□□□□ -1.43
TPM3-218ENST00000505010 RPL24P83731 157 aaKnown RBP6.1□□□□□ -1.43
TPM3-218ENST00000505010 COX17Q14061 63 aa6.1□□□□□ -1.43
TPM3-218ENST00000505010 LINC00308Q8TCZ7 52 aa6.1□□□□□ -1.43
TPM3-218ENST00000505010 COPS9Q8WXC6 57 aa6.1□□□□□ -1.43
TPM3-218ENST00000505010 A6NDN8 102 aa6.09□□□□□ -1.43
TPM3-218ENST00000505010 SLPIP03973 132 aa6.09□□□□□ -1.43
TPM3-218ENST00000505010 SOSTDC1Q6X4U4 206 aa6.09□□□□□ -1.43
TPM3-218ENST00000505010 NHP2Q9NX24 153 aaKnown RBP6.09□□□□□ -1.43
TPM3-218ENST00000505010 DMBT1Q9UGM3 2413 aaPredicted RBP6.09□□□□□ -1.43
TPM3-218ENST00000505010 A0A087WTM6 91 aa6.08□□□□□ -1.44
TPM3-218ENST00000505010 A4D1N5 150 aa6.08□□□□□ -1.44
TPM3-218ENST00000505010 K7ERJ3 54 aa6.08□□□□□ -1.44
TPM3-218ENST00000505010 EIF4EBP3O60516 100 aaPredicted RBP6.08□□□□□ -1.44
TPM3-218ENST00000505010 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.07□□□□□ -1.44
TPM3-218ENST00000505010 NDUFC2-KCTD14E9PQ53 114 aa6.07□□□□□ -1.44
TPM3-218ENST00000505010 CNBPP62633 177 aaKnown RBP6.07□□□□□ -1.44
TPM3-218ENST00000505010 RPL18AQ02543 176 aaKnown RBP6.07□□□□□ -1.44
TPM3-218ENST00000505010 RNF151Q2KHN1 245 aa6.07□□□□□ -1.44
TPM3-218ENST00000505010 COL5A1-AS1Q5SY13 56 aa6.07□□□□□ -1.44
TPM3-218ENST00000505010 Q8N814 137 aa6.07□□□□□ -1.44
TPM3-218ENST00000505010 SND1-IT1Q9HBX3 110 aa6.07□□□□□ -1.44
TPM3-218ENST00000505010 GAGE2EQ4V326 116 aa6.06□□□□□ -1.44
TPM3-218ENST00000505010 RAB37Q96AX2 223 aa6.06□□□□□ -1.44
TPM3-218ENST00000505010 KRTAP3-3Q9BYR6 98 aa6.06□□□□□ -1.44
TPM3-218ENST00000505010 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
TPM3-218ENST00000505010 XAGE1AQ9HD64 81 aa6.06□□□□□ -1.44
TPM3-218ENST00000505010 GAGE2DQ9UEU5 116 aa6.06□□□□□ -1.44
TPM3-218ENST00000505010 LOC107984640A0A0U1RRK4 108 aa6.05□□□□□ -1.44
TPM3-218ENST00000505010 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
TPM3-218ENST00000505010 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
TPM3-218ENST00000505010 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
TPM3-218ENST00000505010 TNP2Q05952 138 aa6.04□□□□□ -1.44
TPM3-218ENST00000505010 Q6ZRP5 223 aa6.04□□□□□ -1.44
TPM3-218ENST00000505010 A0A1B0GWB2 263 aa6.03□□□□□ -1.44
TPM3-218ENST00000505010 CFC1BP0CG36 223 aa6.03□□□□□ -1.44
TPM3-218ENST00000505010 CFC1P0CG37 223 aa6.03□□□□□ -1.44
TPM3-218ENST00000505010 GAGE2BQ13066 116 aa6.03□□□□□ -1.44
TPM3-218ENST00000505010 LBHQ53QV2 105 aaPredicted RBP6.03□□□□□ -1.44
TPM3-218ENST00000505010 FAT1Q14517 4588 aa6.03□□□□□ -1.44
TPM3-218ENST00000505010 LOC107984156A0A0G2JMH3 177 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 EPM2AB3EWF7 344 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 H7C2G1 150 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 TAX1BP3O14907 124 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 NCR3O14931 201 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 INAFM2P0DMQ5 153 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
TPM3-218ENST00000505010 ARL17AQ8IVW1 177 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 PRO1854Q9UHT4 67 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 PKIGQ9Y2B9 76 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 MYCBP2O75592 4640 aa6.02□□□□□ -1.45
TPM3-218ENST00000505010 A0A096LNI7 61 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 IGKV2-24A0A0C4DH68 120 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 NDUFC2O95298 119 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 FUSP35637 526 aaKnown RBP eCLIP6.01□□□□□ -1.45
TPM3-218ENST00000505010 Q1RN00 199 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 LINC01620Q4KN68 170 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 C9orf129Q5T035 196 aaKnown RBP6.01□□□□□ -1.45
TPM3-218ENST00000505010 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 Q8NDZ9 215 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 PGPEP1Q9NXJ5 209 aa6.01□□□□□ -1.45
TPM3-218ENST00000505010 SRRM2Q9UQ35 2752 aaKnown RBP6□□□□□ -1.45
TPM3-218ENST00000505010 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
TPM3-218ENST00000505010 IGKV2D-28P01615 120 aa6□□□□□ -1.45
TPM3-218ENST00000505010 PRR3P79522 188 aaKnown RBP6□□□□□ -1.45
TPM3-218ENST00000505010 LINC00337Q8N6G1 96 aa6□□□□□ -1.45
TPM3-218ENST00000505010 NAA38Q9BRA0 125 aaKnown RBP6□□□□□ -1.45
TPM3-218ENST00000505010 TRAV13-2A0A0B4J235 113 aa5.99□□□□□ -1.45
TPM3-218ENST00000505010 TSPAN13O95857 204 aa5.99□□□□□ -1.45
TPM3-218ENST00000505010 OR13C6PQ8NH95 151 aa5.99□□□□□ -1.45
TPM3-218ENST00000505010 FAM168BA1KXE4 195 aa5.98□□□□□ -1.45
TPM3-218ENST00000505010 C9orf118A6NHY6 69 aa5.98□□□□□ -1.45
TPM3-218ENST00000505010 H3BUT2 72 aa5.98□□□□□ -1.45
TPM3-218ENST00000505010 CHTF8P0CG12 524 aa5.98□□□□□ -1.45
TPM3-218ENST00000505010 VPREB1P12018 145 aa5.98□□□□□ -1.45
TPM3-218ENST00000505010 S100A7L2Q5SY68 101 aa5.98□□□□□ -1.45
TPM3-218ENST00000505010 SERTAD4-AS1Q5TG53 156 aa5.98□□□□□ -1.45
TPM3-218ENST00000505010 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
TPM3-218ENST00000505010 NKAPP1Q8N9T2 125 aa5.98□□□□□ -1.45
TPM3-218ENST00000505010 TRBV10-2A0A0K0K1G8 114 aa5.97□□□□□ -1.45
TPM3-218ENST00000505010 PSMB2P49721 201 aa5.97□□□□□ -1.45
TPM3-218ENST00000505010 A0A1B0GV90 55 aa5.96□□□□□ -1.46
TPM3-218ENST00000505010 KRTAP10-2P60368 255 aa5.96□□□□□ -1.46
TPM3-218ENST00000505010 SDIM1Q6ZPB5 146 aa5.96□□□□□ -1.46
TPM3-218ENST00000505010 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
TPM3-218ENST00000505010 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
TPM3-218ENST00000505010 M0R378 163 aa5.95□□□□□ -1.46
TPM3-218ENST00000505010 LINC00474Q9P2X8 69 aa5.95□□□□□ -1.46
TPM3-218ENST00000505010 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
TPM3-218ENST00000505010 IGLV5-37A0A075B6J1 123 aa5.94□□□□□ -1.46
TPM3-218ENST00000505010 TRBV10-3A0A0K0K1G6 114 aa5.94□□□□□ -1.46
TPM3-218ENST00000505010 A0A1W2PPM0 123 aa5.94□□□□□ -1.46
TPM3-218ENST00000505010 FABP2P12104 132 aa5.94□□□□□ -1.46
TPM3-218ENST00000505010 C7orf33Q8WU49 177 aa5.94□□□□□ -1.46
TPM3-218ENST00000505010 TMEM126AQ9H061 195 aa5.94□□□□□ -1.46
TPM3-218ENST00000505010 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
TPM3-218ENST00000505010 PANO1I0J062 215 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 M0QXV9 152 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 TRIAP1O43715 76 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms