RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 SACSQ9NZJ4 4579 aa13.48□□□□□ -0.25
KPNA1-210ENST00000494339 LRCOL1A6NCL2 159 aa13.47□□□□□ -0.25
KPNA1-210ENST00000494339 C1orf134Q5TEV5 83 aa13.47□□□□□ -0.25
KPNA1-210ENST00000494339 CARD19Q96LW7 228 aa13.47□□□□□ -0.25
KPNA1-210ENST00000494339 Q1RN00 199 aa13.45□□□□□ -0.26
KPNA1-210ENST00000494339 H7C2G1 150 aa13.44□□□□□ -0.26
KPNA1-210ENST00000494339 RPL13AP40429 203 aaKnown RBP13.43□□□□□ -0.26
KPNA1-210ENST00000494339 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.43□□□□□ -0.26
KPNA1-210ENST00000494339 TRAV13-2A0A0B4J235 113 aa13.43□□□□□ -0.26
KPNA1-210ENST00000494339 PSMB2P49721 201 aa13.43□□□□□ -0.26
KPNA1-210ENST00000494339 C14orf177Q52M58 125 aa13.43□□□□□ -0.26
KPNA1-210ENST00000494339 DNAH6Q9C0G6 4158 aa13.41□□□□□ -0.26
KPNA1-210ENST00000494339 SCGB1C2P0DMR2 95 aa13.4□□□□□ -0.26
KPNA1-210ENST00000494339 TRBV20-1A0A075B6N2 111 aa13.39□□□□□ -0.27
KPNA1-210ENST00000494339 NDUFC2O95298 119 aa13.39□□□□□ -0.27
KPNA1-210ENST00000494339 IGKV2-28A0A075B6P5 120 aa13.39□□□□□ -0.27
KPNA1-210ENST00000494339 NDUFC2-KCTD14E9PQ53 114 aa13.39□□□□□ -0.27
KPNA1-210ENST00000494339 IGKV2D-28P01615 120 aa13.39□□□□□ -0.27
KPNA1-210ENST00000494339 DNAH2Q9P225 4427 aa13.38□□□□□ -0.27
KPNA1-210ENST00000494339 A0A087WTM6 91 aa13.38□□□□□ -0.27
KPNA1-210ENST00000494339 COX6CP09669 75 aa13.37□□□□□ -0.27
KPNA1-210ENST00000494339 RNF151Q2KHN1 245 aa13.37□□□□□ -0.27
KPNA1-210ENST00000494339 GAGE2EQ4V326 116 aa13.37□□□□□ -0.27
KPNA1-210ENST00000494339 XAGE1AQ9HD64 81 aa13.37□□□□□ -0.27
KPNA1-210ENST00000494339 GAGE2DQ9UEU5 116 aa13.37□□□□□ -0.27
KPNA1-210ENST00000494339 TRIAP1O43715 76 aa13.37□□□□□ -0.27
KPNA1-210ENST00000494339 CNBPP62633 177 aaKnown RBP13.37□□□□□ -0.27
KPNA1-210ENST00000494339 Q6ZRP5 223 aa13.37□□□□□ -0.27
KPNA1-210ENST00000494339 LINC00337Q8N6G1 96 aa13.36□□□□□ -0.27
KPNA1-210ENST00000494339 Q8N814 137 aa13.36□□□□□ -0.27
KPNA1-210ENST00000494339 LCE6AA0A183 80 aa13.35□□□□□ -0.27
KPNA1-210ENST00000494339 RPL18AQ02543 176 aaKnown RBP13.35□□□□□ -0.27
KPNA1-210ENST00000494339 H3BMG7 143 aa13.34□□□□□ -0.27
KPNA1-210ENST00000494339 RYR2Q92736 4967 aa13.33□□□□□ -0.28
KPNA1-210ENST00000494339 TCL1BO95988 128 aa13.33□□□□□ -0.28
KPNA1-210ENST00000494339 TLX1NBP0CAT3 122 aa13.32□□□□□ -0.28
KPNA1-210ENST00000494339 RTL8CO15255 209 aa13.31□□□□□ -0.28
KPNA1-210ENST00000494339 TNP2Q05952 138 aa13.31□□□□□ -0.28
KPNA1-210ENST00000494339 Q8NDZ9 215 aa13.31□□□□□ -0.28
KPNA1-210ENST00000494339 PRR3P79522 188 aaKnown RBP13.3□□□□□ -0.28
KPNA1-210ENST00000494339 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
KPNA1-210ENST00000494339 RYR3Q15413 4870 aa13.29□□□□□ -0.28
KPNA1-210ENST00000494339 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
KPNA1-210ENST00000494339 RPL28P46779 137 aaKnown RBP13.29□□□□□ -0.28
KPNA1-210ENST00000494339 F8W1H4 67 aa13.29□□□□□ -0.28
KPNA1-210ENST00000494339 LINC01620Q4KN68 170 aa13.29□□□□□ -0.28
KPNA1-210ENST00000494339 OR13C6PQ8NH95 151 aa13.29□□□□□ -0.28
KPNA1-210ENST00000494339 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
KPNA1-210ENST00000494339 ATXN8Q156A1 80 aa13.28□□□□□ -0.28
KPNA1-210ENST00000494339 C9orf129Q5T035 196 aaKnown RBP13.28□□□□□ -0.28
KPNA1-210ENST00000494339 C9orf163Q8N9P6 203 aa13.27□□□□□ -0.29
KPNA1-210ENST00000494339 TMEM126AQ9H061 195 aa13.26□□□□□ -0.29
KPNA1-210ENST00000494339 DNAH17Q9UFH2 4485 aa13.26□□□□□ -0.29
KPNA1-210ENST00000494339 TRBV10-2A0A0K0K1G8 114 aa13.25□□□□□ -0.29
KPNA1-210ENST00000494339 NCR3O14931 201 aa13.25□□□□□ -0.29
KPNA1-210ENST00000494339 SMIM11BQ8TCY0 68 aa13.25□□□□□ -0.29
KPNA1-210ENST00000494339 PRO0461Q9UI25 63 aa13.23□□□□□ -0.29
KPNA1-210ENST00000494339 A0A096LNI7 61 aa13.23□□□□□ -0.29
KPNA1-210ENST00000494339 IGKV2-24A0A0C4DH68 120 aa13.23□□□□□ -0.29
KPNA1-210ENST00000494339 LST1O00453 97 aa13.22□□□□□ -0.29
KPNA1-210ENST00000494339 FRAS1Q86XX4 4008 aa13.22□□□□□ -0.29
KPNA1-210ENST00000494339 C16orf90A8MZG2 172 aa13.21□□□□□ -0.3
KPNA1-210ENST00000494339 VPREB1P12018 145 aa13.21□□□□□ -0.3
KPNA1-210ENST00000494339 S100A7L2Q5SY68 101 aa13.21□□□□□ -0.3
KPNA1-210ENST00000494339 CLEC2BQ92478 149 aa13.21□□□□□ -0.3
KPNA1-210ENST00000494339 FAM168BA1KXE4 195 aa13.2□□□□□ -0.3
KPNA1-210ENST00000494339 H0YGX0 51 aa13.19□□□□□ -0.3
KPNA1-210ENST00000494339 SERTAD4-AS1Q5TG53 156 aa13.19□□□□□ -0.3
KPNA1-210ENST00000494339 SDIM1Q6ZPB5 146 aa13.19□□□□□ -0.3
KPNA1-210ENST00000494339 IGLV5-52A0A0A0MRZ9 124 aa13.18□□□□□ -0.3
KPNA1-210ENST00000494339 CHTF8P0CG12 524 aa13.18□□□□□ -0.3
KPNA1-210ENST00000494339 IGLV6-57P01721 117 aa13.17□□□□□ -0.3
KPNA1-210ENST00000494339 MTURNQ8N3F0 131 aa13.17□□□□□ -0.3
KPNA1-210ENST00000494339 C9JAW5 83 aa13.16□□□□□ -0.3
KPNA1-210ENST00000494339 PKIGQ9Y2B9 76 aa13.15□□□□□ -0.3
KPNA1-210ENST00000494339 M0R378 163 aa13.15□□□□□ -0.3
KPNA1-210ENST00000494339 KRTAP10-2P60368 255 aa13.15□□□□□ -0.3
KPNA1-210ENST00000494339 FAM19A5Q7Z5A7 132 aaPredicted RBP13.15□□□□□ -0.3
KPNA1-210ENST00000494339 M0QXV9 152 aa13.14□□□□□ -0.31
KPNA1-210ENST00000494339 SLC25A20O43772 301 aa13.14□□□□□ -0.31
KPNA1-210ENST00000494339 TRACP01848 142 aa13.14□□□□□ -0.31
KPNA1-210ENST00000494339 KRTAP7-1Q8IUC3 87 aa13.14□□□□□ -0.31
KPNA1-210ENST00000494339 NKAPP1Q8N9T2 125 aa13.14□□□□□ -0.31
KPNA1-210ENST00000494339 PLA2G2DQ9UNK4 145 aa13.14□□□□□ -0.31
KPNA1-210ENST00000494339 SMCPP49901 116 aaPredicted RBP13.13□□□□□ -0.31
KPNA1-210ENST00000494339 CBY1Q9Y3M2 126 aa13.12□□□□□ -0.31
KPNA1-210ENST00000494339 FAT2Q9NYQ8 4349 aa13.12□□□□□ -0.31
KPNA1-210ENST00000494339 TRBV10-3A0A0K0K1G6 114 aa13.11□□□□□ -0.31
KPNA1-210ENST00000494339 LINC01600Q96MT4 127 aa13.11□□□□□ -0.31
KPNA1-210ENST00000494339 HECTD4Q9Y4D8 3996 aa13.11□□□□□ -0.31
KPNA1-210ENST00000494339 PANO1I0J062 215 aa13.11□□□□□ -0.31
KPNA1-210ENST00000494339 A0A1W2PNN7 141 aa13.1□□□□□ -0.31
KPNA1-210ENST00000494339 FAM218AQ96MZ4 157 aa13.1□□□□□ -0.31
KPNA1-210ENST00000494339 ETDBQ3ZM63 59 aa13.09□□□□□ -0.31
KPNA1-210ENST00000494339 ANKRD29Q8N6D5 301 aa13.09□□□□□ -0.31
KPNA1-210ENST00000494339 H3BT86 120 aa13.09□□□□□ -0.31
KPNA1-210ENST00000494339 C7orf33Q8WU49 177 aa13.09□□□□□ -0.31
KPNA1-210ENST00000494339 LINC00474Q9P2X8 69 aa13.09□□□□□ -0.31
KPNA1-210ENST00000494339 C22orf24Q9Y442 160 aa13.09□□□□□ -0.31
KPNA1-210ENST00000494339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms