RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.94
BRCA1-223ENST00000494123 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
BRCA1-223ENST00000494123 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
BRCA1-223ENST00000494123 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.94
BRCA1-223ENST00000494123 PLA2G2DQ9UNK4 145 aa9.15□□□□□ -0.94
BRCA1-223ENST00000494123 EPM2AB3EWF7 344 aa9.14□□□□□ -0.95
BRCA1-223ENST00000494123 PHF5AQ7RTV0 110 aaKnown RBP9.14□□□□□ -0.95
BRCA1-223ENST00000494123 BOD1L2Q8IYS8 172 aa9.14□□□□□ -0.95
BRCA1-223ENST00000494123 COX8AP10176 69 aa9.13□□□□□ -0.95
BRCA1-223ENST00000494123 NPC2P61916 151 aa9.13□□□□□ -0.95
BRCA1-223ENST00000494123 KRTAP7-1Q8IUC3 87 aa9.13□□□□□ -0.95
BRCA1-223ENST00000494123 LITAFQ99732 161 aa9.13□□□□□ -0.95
BRCA1-223ENST00000494123 RYR1P21817 5038 aa9.13□□□□□ -0.95
BRCA1-223ENST00000494123 FAM229AH3BQW9 127 aa9.13□□□□□ -0.95
BRCA1-223ENST00000494123 S100A12P80511 92 aa9.13□□□□□ -0.95
BRCA1-223ENST00000494123 C22orf24Q9Y442 160 aa9.13□□□□□ -0.95
BRCA1-223ENST00000494123 LBHQ53QV2 105 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-223ENST00000494123 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
BRCA1-223ENST00000494123 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
BRCA1-223ENST00000494123 VPREB1P12018 145 aa9.11□□□□□ -0.95
BRCA1-223ENST00000494123 UBE2BP63146 152 aa9.11□□□□□ -0.95
BRCA1-223ENST00000494123 MRPL55Q7Z7F7 128 aaKnown RBP9.11□□□□□ -0.95
BRCA1-223ENST00000494123 Q8N1X5 172 aa9.11□□□□□ -0.95
BRCA1-223ENST00000494123 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
BRCA1-223ENST00000494123 LINC00308Q8TCZ7 52 aa9.1□□□□□ -0.95
BRCA1-223ENST00000494123 SPANXDQ9BXN6 97 aa9.1□□□□□ -0.95
BRCA1-223ENST00000494123 SPANXCQ9NY87 97 aa9.1□□□□□ -0.95
BRCA1-223ENST00000494123 LOC107984156A0A0G2JMH3 177 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 LOC105371267A0A1B0GV96 52 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 DLEU1O43261 78 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 Q5VSD8 79 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 SLC25A34Q6PIV7 304 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 ARL17AQ8IVW1 177 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 COPS9Q8WXC6 57 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 GAGE10A6NGK3 116 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 RPL37AP61513 92 aaKnown RBP9.09□□□□□ -0.95
BRCA1-223ENST00000494123 Q6ZVH6 145 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 Q8NDZ9 215 aa9.09□□□□□ -0.95
BRCA1-223ENST00000494123 PLA2G1BP04054 148 aaKnown RBP9.08□□□□□ -0.96
BRCA1-223ENST00000494123 SMIM6P0DI80 62 aa9.08□□□□□ -0.96
BRCA1-223ENST00000494123 SRSF9Q13242 221 aaKnown RBP eCLIP9.08□□□□□ -0.96
BRCA1-223ENST00000494123 SOSTDC1Q6X4U4 206 aa9.08□□□□□ -0.96
BRCA1-223ENST00000494123 HSPG2P98160 4391 aa9.07□□□□□ -0.96
BRCA1-223ENST00000494123 NCR3O14931 201 aa9.07□□□□□ -0.96
BRCA1-223ENST00000494123 LINC00167Q96N53 147 aa9.07□□□□□ -0.96
BRCA1-223ENST00000494123 M0R378 163 aa9.06□□□□□ -0.96
BRCA1-223ENST00000494123 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-223ENST00000494123 IFITM1P13164 125 aa9.06□□□□□ -0.96
BRCA1-223ENST00000494123 PRR3P79522 188 aaKnown RBP9.06□□□□□ -0.96
BRCA1-223ENST00000494123 SPANXB1Q9NS25 103 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-223ENST00000494123 RPL37AP8A6NKH3 93 aa9.05□□□□□ -0.96
BRCA1-223ENST00000494123 NDUFC2O95298 119 aa9.05□□□□□ -0.96
BRCA1-223ENST00000494123 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
BRCA1-223ENST00000494123 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
BRCA1-223ENST00000494123 MUSTN1Q8IVN3 82 aa9.04□□□□□ -0.96
BRCA1-223ENST00000494123 KRTAP17-1Q9BYP8 105 aa9.04□□□□□ -0.96
BRCA1-223ENST00000494123 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
BRCA1-223ENST00000494123 HIST1H4GQ99525 98 aa9.03□□□□□ -0.96
BRCA1-223ENST00000494123 TRBV10-2A0A0K0K1G8 114 aa9.02□□□□□ -0.96
BRCA1-223ENST00000494123 C1orf137Q5JT78 98 aa9.02□□□□□ -0.96
BRCA1-223ENST00000494123 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.96
BRCA1-223ENST00000494123 PPDPFQ9H3Y8 114 aa9.02□□□□□ -0.96
BRCA1-223ENST00000494123 HIGD1BQ9P298 99 aa9.02□□□□□ -0.96
BRCA1-223ENST00000494123 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
BRCA1-223ENST00000494123 HERC2O95714 4834 aa9.01□□□□□ -0.97
BRCA1-223ENST00000494123 S100A7L2Q5SY68 101 aa9.01□□□□□ -0.97
BRCA1-223ENST00000494123 UQCR10Q9UDW1 63 aa9.01□□□□□ -0.97
BRCA1-223ENST00000494123 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
BRCA1-223ENST00000494123 LINC00518Q8N0U6 118 aa9□□□□□ -0.97
BRCA1-223ENST00000494123 TRBV10-3A0A0K0K1G6 114 aa8.99□□□□□ -0.97
BRCA1-223ENST00000494123 DDTP30046 118 aa8.99□□□□□ -0.97
BRCA1-223ENST00000494123 OR13C6PQ8NH95 151 aa8.98□□□□□ -0.97
BRCA1-223ENST00000494123 KRTAP10-4P60372 401 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-223ENST00000494123 REG3GQ6UW15 175 aa8.98□□□□□ -0.97
BRCA1-223ENST00000494123 C12orf57Q99622 126 aa8.98□□□□□ -0.97
BRCA1-223ENST00000494123 FAT1Q14517 4588 aa8.97□□□□□ -0.97
BRCA1-223ENST00000494123 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
BRCA1-223ENST00000494123 PRYO14603 147 aa8.96□□□□□ -0.98
BRCA1-223ENST00000494123 TAL2Q16559 108 aa8.96□□□□□ -0.98
BRCA1-223ENST00000494123 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.98
BRCA1-223ENST00000494123 TMEM126AQ9H061 195 aa8.96□□□□□ -0.98
BRCA1-223ENST00000494123 SRRM2Q9UQ35 2752 aaKnown RBP8.96□□□□□ -0.98
BRCA1-223ENST00000494123 A4D1N5 150 aa8.95□□□□□ -0.98
BRCA1-223ENST00000494123 BCE1O60756 84 aa8.95□□□□□ -0.98
BRCA1-223ENST00000494123 IGLV6-57P01721 117 aa8.95□□□□□ -0.98
BRCA1-223ENST00000494123 IGLV7-43P04211 117 aa8.95□□□□□ -0.98
BRCA1-223ENST00000494123 CBY1Q9Y3M2 126 aa8.95□□□□□ -0.98
BRCA1-223ENST00000494123 HNRNPA3P51991 378 aaKnown RBP8.94□□□□□ -0.98
BRCA1-223ENST00000494123 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
BRCA1-223ENST00000494123 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
BRCA1-223ENST00000494123 A6NDN8 102 aa8.94□□□□□ -0.98
BRCA1-223ENST00000494123 VPS13BQ7Z7G8 4022 aa8.93□□□□□ -0.98
BRCA1-223ENST00000494123 TRAV23DV6A0A075B6W5 121 aa8.93□□□□□ -0.98
BRCA1-223ENST00000494123 TRAV13-2A0A0B4J235 113 aa8.93□□□□□ -0.98
BRCA1-223ENST00000494123 UBE2AP49459 152 aa8.93□□□□□ -0.98
BRCA1-223ENST00000494123 FAM19A1Q7Z5A9 133 aa8.93□□□□□ -0.98
BRCA1-223ENST00000494123 CEND1Q8N111 149 aa8.93□□□□□ -0.98
BRCA1-223ENST00000494123 INAFM2P0DMQ5 153 aa8.92□□□□□ -0.98
BRCA1-223ENST00000494123 HSD52Q0P140 79 aa8.92□□□□□ -0.98
BRCA1-223ENST00000494123 TSTD3H0UI37 97 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms