RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 M0R378 163 aa10.09□□□□□ -0.79
SGMS1-204ENST00000492601 LINC00158P58513 81 aa10.09□□□□□ -0.79
SGMS1-204ENST00000492601 NDUFA5Q16718 116 aa10.09□□□□□ -0.79
SGMS1-204ENST00000492601 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
SGMS1-204ENST00000492601 SVBPQ8N300 66 aa10.09□□□□□ -0.79
SGMS1-204ENST00000492601 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
SGMS1-204ENST00000492601 IGKV2D-26A0A0A0MRZ7 120 aa10.06□□□□□ -0.8
SGMS1-204ENST00000492601 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
SGMS1-204ENST00000492601 LINC00304Q8N9R0 145 aa10.06□□□□□ -0.8
SGMS1-204ENST00000492601 IFI27L1Q96BM0 104 aa10.06□□□□□ -0.8
SGMS1-204ENST00000492601 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
SGMS1-204ENST00000492601 YPEL4Q96NS1 127 aa10.05□□□□□ -0.8
SGMS1-204ENST00000492601 RETNLBQ9BQ08 111 aa10.05□□□□□ -0.8
SGMS1-204ENST00000492601 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
SGMS1-204ENST00000492601 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
SGMS1-204ENST00000492601 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
SGMS1-204ENST00000492601 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
SGMS1-204ENST00000492601 HIGD2AQ9BW72 106 aa10.03□□□□□ -0.8
SGMS1-204ENST00000492601 ATP6V1G1O75348 118 aa10.01□□□□□ -0.81
SGMS1-204ENST00000492601 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
SGMS1-204ENST00000492601 FAM19A2Q8N3H0 131 aa10.01□□□□□ -0.81
SGMS1-204ENST00000492601 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
SGMS1-204ENST00000492601 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
SGMS1-204ENST00000492601 H0Y8G0 127 aa9.99□□□□□ -0.81
SGMS1-204ENST00000492601 HSBP1O75506 76 aa9.99□□□□□ -0.81
SGMS1-204ENST00000492601 NCR3O14931 201 aa9.98□□□□□ -0.81
SGMS1-204ENST00000492601 MIR7-3HGQ8N6C7 128 aa9.98□□□□□ -0.81
SGMS1-204ENST00000492601 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
SGMS1-204ENST00000492601 SPRR4Q96PI1 79 aa9.96□□□□□ -0.82
SGMS1-204ENST00000492601 PRYO14603 147 aa9.95□□□□□ -0.82
SGMS1-204ENST00000492601 HERV-K104P63124 156 aa9.95□□□□□ -0.82
SGMS1-204ENST00000492601 TRGC2P03986 189 aa9.94□□□□□ -0.82
SGMS1-204ENST00000492601 MUC17Q685J3 4493 aa9.94□□□□□ -0.82
SGMS1-204ENST00000492601 MYMXA0A1B0GTQ4 84 aa9.93□□□□□ -0.82
SGMS1-204ENST00000492601 IGLV7-46A0A075B6I9 117 aa9.92□□□□□ -0.82
SGMS1-204ENST00000492601 LEPROTL1O95214 131 aa9.92□□□□□ -0.82
SGMS1-204ENST00000492601 TSPEAR-AS2P59090 65 aa9.92□□□□□ -0.82
SGMS1-204ENST00000492601 KCNQ1DNQ9H478 68 aa9.92□□□□□ -0.82
SGMS1-204ENST00000492601 TRBV10-3A0A0K0K1G6 114 aa9.91□□□□□ -0.82
SGMS1-204ENST00000492601 ETDCA0A1B0GVM5 59 aa9.91□□□□□ -0.82
SGMS1-204ENST00000492601 LINC00587B1AMM8 73 aa9.91□□□□□ -0.82
SGMS1-204ENST00000492601 SERF1AO75920 110 aa9.91□□□□□ -0.82
SGMS1-204ENST00000492601 LINC00310P59036 64 aa9.91□□□□□ -0.82
SGMS1-204ENST00000492601 LINC00337Q8N6G1 96 aa9.91□□□□□ -0.82
SGMS1-204ENST00000492601 DAND5Q8N907 189 aa9.91□□□□□ -0.82
SGMS1-204ENST00000492601 MAP1LC3CQ9BXW4 147 aa9.91□□□□□ -0.82
SGMS1-204ENST00000492601 ZNF706Q9Y5V0 76 aaPredicted RBP9.91□□□□□ -0.82
SGMS1-204ENST00000492601 SPRR1AP35321 89 aa9.9□□□□□ -0.82
SGMS1-204ENST00000492601 SMCR5Q8TEV8 140 aa9.9□□□□□ -0.82
SGMS1-204ENST00000492601 CDIP1Q9H305 208 aa9.9□□□□□ -0.82
SGMS1-204ENST00000492601 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
SGMS1-204ENST00000492601 A0A0U1RQV1 116 aa9.89□□□□□ -0.83
SGMS1-204ENST00000492601 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
SGMS1-204ENST00000492601 LEPROTO15243 131 aa9.89□□□□□ -0.83
SGMS1-204ENST00000492601 CTAG1AP78358 180 aa9.89□□□□□ -0.83
SGMS1-204ENST00000492601 FAT4Q6V0I7 4981 aa9.88□□□□□ -0.83
SGMS1-204ENST00000492601 FABP4P15090 132 aa9.88□□□□□ -0.83
SGMS1-204ENST00000492601 TPRXLQ17RH7 258 aa9.88□□□□□ -0.83
SGMS1-204ENST00000492601 SPAG11AQ6PDA7 123 aa9.88□□□□□ -0.83
SGMS1-204ENST00000492601 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
SGMS1-204ENST00000492601 PLNP26678 52 aa9.87□□□□□ -0.83
SGMS1-204ENST00000492601 C4orf48Q5BLP8 95 aa9.87□□□□□ -0.83
SGMS1-204ENST00000492601 Q8NBF4 154 aa9.87□□□□□ -0.83
SGMS1-204ENST00000492601 J3QQQ9 107 aa9.86□□□□□ -0.83
SGMS1-204ENST00000492601 HSPB8Q9UJY1 196 aa9.86□□□□□ -0.83
SGMS1-204ENST00000492601 DPM2O94777 84 aa9.85□□□□□ -0.83
SGMS1-204ENST00000492601 S100A12P80511 92 aa9.85□□□□□ -0.83
SGMS1-204ENST00000492601 LOC107984156A0A0G2JMH3 177 aa9.84□□□□□ -0.83
SGMS1-204ENST00000492601 B5MCH6 92 aa9.84□□□□□ -0.83
SGMS1-204ENST00000492601 DDTP30046 118 aa9.84□□□□□ -0.83
SGMS1-204ENST00000492601 HERVK_113P61574 105 aa9.84□□□□□ -0.83
SGMS1-204ENST00000492601 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
SGMS1-204ENST00000492601 ARL17AQ8IVW1 177 aa9.84□□□□□ -0.83
SGMS1-204ENST00000492601 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
SGMS1-204ENST00000492601 ERC2-IT1O76042 136 aa9.82□□□□□ -0.84
SGMS1-204ENST00000492601 IGKCP01834 107 aa9.82□□□□□ -0.84
SGMS1-204ENST00000492601 MIEN1Q9BRT3 115 aa9.82□□□□□ -0.84
SGMS1-204ENST00000492601 TRBV10-2A0A0K0K1G8 114 aa9.81□□□□□ -0.84
SGMS1-204ENST00000492601 NMUP48645 174 aa9.81□□□□□ -0.84
SGMS1-204ENST00000492601 LINC00483Q53H64 154 aa9.81□□□□□ -0.84
SGMS1-204ENST00000492601 SLC7A5P1Q8MH63 180 aa9.81□□□□□ -0.84
SGMS1-204ENST00000492601 NPC2P61916 151 aa9.8□□□□□ -0.84
SGMS1-204ENST00000492601 SPANXB1Q9NS25 103 aaPredicted RBP9.8□□□□□ -0.84
SGMS1-204ENST00000492601 IGLV9-49A0A0B4J1Y8 123 aa9.79□□□□□ -0.84
SGMS1-204ENST00000492601 COLCA2A8K830 154 aa9.79□□□□□ -0.84
SGMS1-204ENST00000492601 S100A7L2Q5SY68 101 aa9.79□□□□□ -0.84
SGMS1-204ENST00000492601 FP248Q71RG6 208 aaPredicted RBP9.79□□□□□ -0.84
SGMS1-204ENST00000492601 Q9BRP9 147 aa9.79□□□□□ -0.84
SGMS1-204ENST00000492601 MOBPQ13875 183 aa9.78□□□□□ -0.84
SGMS1-204ENST00000492601 Q6ZRX8 168 aa9.78□□□□□ -0.84
SGMS1-204ENST00000492601 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.85
SGMS1-204ENST00000492601 SOSTDC1Q6X4U4 206 aa9.77□□□□□ -0.85
SGMS1-204ENST00000492601 A0A0J9YXY3 114 aa9.76□□□□□ -0.85
SGMS1-204ENST00000492601 NDUFC2O95298 119 aa9.76□□□□□ -0.85
SGMS1-204ENST00000492601 SPINK1P00995 79 aa9.76□□□□□ -0.85
SGMS1-204ENST00000492601 IGLV6-57P01721 117 aa9.76□□□□□ -0.85
SGMS1-204ENST00000492601 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
SGMS1-204ENST00000492601 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
SGMS1-204ENST00000492601 KRTAP13-3Q3SY46 172 aa9.73□□□□□ -0.85
SGMS1-204ENST00000492601 LCE2AQ5TA79 106 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms